BAC Information

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BAC

Clone NameB6Ng01-018G09
Chromosome11 (Build37)
Map Location 47,526,945 - 47,580,893
singlet/doubletdoublet
Overlap geneLOC100039647
Upstream geneLOC620678, Havcr1, Timd4, Sgcd, LOC628753
Downstream geneLOC192895, Hn1l-ps2, LOC667163, LOC432554
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018G09.bB6Ng01-018G09.g
ACCDH851812DH851813
length798404
definitionDH851812|Mus musculus domesticus DNA, BAC clone: B6Ng01-018G09, 5' end.DH851813|Mus musculus domesticus DNA, BAC clone: B6Ng01-018G09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,580,093 - 47,580,893)(47,526,945 - 47,527,269)
sequence
gaattctattatgatgtttaaaaaacctatgattctttgattcaggtgac
acagtcttacgcttttagagttaaagctgttgttgacttgcttcacccaa
actttcacaacagggtgagtatcttctatacagtcttctcctctgctcaa
cctatctcagcctgcgactctgggctagtgcttggtggagttgattgtaa
aaaattatccatgaaaagaacctgcaggaaggaaaactttctgggccata
actgtcttcactcaatgttcacagagcaatcacttgatgtttcaggacag
ggacaggcgaagtaagagagaacaatgcatctgaaaagctaggataaaag
ctaagtgctggaattatgaactgagttcaggtctactactactaccttaa
agatgatcacttggaaaatagaaacagtacaggccagaccatttgaataa
tttatcctaaagtggataggaaccaaatgcctaatgatctctaaaaggat
gtgtgataagaacaaagctaaaagcaaagacagataaacattttagaaat
agatctatggaggaatcgagagcccccaagtggagctgtccagttaacct
ccatgttgagagtagatgggaggatgaaatgtggagttatgcattgcctc
tgaggaaaaagatatcagttgtgctcgtctgaagttgcaatttactggtg
aagtatactggccaatgtagatatcacatcaaaagatcatcatgtccgtt
tgatagaagcttagtttggaacccacctggatttctgttgctgttgtt
actatgaagatgagattggccatgaactctaagagatccatccattcctg
cctcctgagtactgggattaaaggcatgtgccatcatgcctgacttgcta
acagggttacaaaacaacaaacaaacatgagttgcttaaaaaaaacaact
tatcaaaatgaataaaatatacaaagaatctcataggccatccaagtggt
ttttttccttgtggctcaagggccagacattatgggatttaatgggcctg
gccaatatcttacagatgttggatggttatttataatgataggatgttta
agagtgtaatgtgggggtatttattttatgtatgtgagtacattgtagtt
gtcttcagacacaccagaagagggtgtcagatctcattacagatggttgt
gagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_47580093_47580893
seq2: B6Ng01-018G09.b_39_836 (reverse)

seq1  AACAACAACAACAATAAATCCAATGTGGGTTTCAAACTATGCTACTATCA  50
      ||||||| |||| | |||||| | ||||||| ||||||| ||| ||||||
seq2  AACAACAGCAAC-AGAAATCC-AGGTGGGTTCCAAACTAAGCTTCTATCA  48

seq1  AACGTACATTGATGAACTTTTGATGTGATATCTACATT-GCCAGTATACT  99
      |||| ||| |||||| |||||||||||||||||||||| |||||||||||
seq2  AACGGACA-TGATGATCTTTTGATGTGATATCTACATTGGCCAGTATACT  97

seq1  TCACCACTAAATTGCAACTTCAGAAGAGCACAACTGATATCTTTTTCCTC  149
      |||||| ||||||||||||||||| |||||||||||||||||||||||||
seq2  TCACCAGTAAATTGCAACTTCAGACGAGCACAACTGATATCTTTTTCCTC  147

seq1  AGAGGCAATGCATAACTCCACATTTCATCCTCCCATCTACTCTCAACATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAATGCATAACTCCACATTTCATCCTCCCATCTACTCTCAACATG  197

seq1  GAGGTTAACTGGACAGCTCCACTTGGGGGCTCTCGATTCCTCCATAGATC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTAACTGGACAGCTCCACTTGGGGGCTCTCGATTCCTCCATAGATC  247

seq1  TATTTCTAAAATGTTTATCTGTCTTTGCTTTTAGCTTTGTTCTTCTCACA  299
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TATTTCTAAAATGTTTATCTGTCTTTGCTTTTAGCTTTGTTCTTATCACA  297

seq1  CATCCTTTTAGAGATCATTAGGCATTTGGTTCCTATCCACTTTAGGATAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTTAGAGATCATTAGGCATTTGGTTCCTATCCACTTTAGGATAA  347

seq1  ATTATTCAAATGGTCTGGCCTCTACTGTTTCTATTTTCCAAGTGATCATC  399
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATTATTCAAATGGTCTGGCCTGTACTGTTTCTATTTTCCAAGTGATCATC  397

seq1  TTTAAGGTAGTAGTAGTAGACCTGAACTCAGTTCATAATTCCAGCACTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGTAGTAGTAGTAGACCTGAACTCAGTTCATAATTCCAGCACTTA  447

seq1  GCTTTTATCCTAGCTTTTCAGATGCATTGTTCTCTCTTACTTCGCCTGTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTATCCTAGCTTTTCAGATGCATTGTTCTCTCTTACTTCGCCTGTC  497

seq1  CCTGTCCTGAAACATCAAGTGATTGCTCTGTGAACATTGAGTGAAGACAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCTGAAACATCAAGTGATTGCTCTGTGAACATTGAGTGAAGACAG  547

seq1  TTATGGCCCAGAAAGTTTTCCTTCCTGCAGGTTCTTTTCATGGATAATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCCCAGAAAGTTTTCCTTCCTGCAGGTTCTTTTCATGGATAATTT  597

seq1  TTTACAATCAACTCCACCAAGCACTAGCCCAGAGTCGCAGGCTGAGATAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATCAACTCCACCAAGCACTAGCCCAGAGTCGCAGGCTGAGATAG  647

seq1  GTTGAGCAGATGAGAAGACTGTATAGAAGATACTCACCCTGTTGTGAAAG  699
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCAGAGGAGAAGACTGTATAGAAGATACTCACCCTGTTGTGAAAG  697

seq1  TTTGGGTGAAGCAAGTCAACAACAGCTTTAACTCTAAAAGTGTAAGACTG  749
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTTGGGTGAAGCAAGTCAACAACAGCTTTAACTCTAAAAGCGTAAGACTG  747

seq1  TGTCACCTTGAATCAAAGAATCATAGGTTTTCTAAACATTATAATAGAAT  799
      ||||||| ||||||||||||||||||||||| ||||||| ||||||||||
seq2  TGTCACC-TGAATCAAAGAATCATAGGTTTTTTAAACATCATAATAGAAT  796

seq1  TC  801
      ||
seq2  TC  798

seq1: chr11_47526945_47527269
seq2: B6Ng01-018G09.g_65_388

seq1  GAATTCACTATGAAGATGAGATTGGCCATGAACTCTAAGAGATCCATCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGAAGATGAGATTGGCCATGAACTCTAAGAGATCCATCCA  50

seq1  TTCCTGCCTCCTGAATACTGGGATTAAAGGCATGTGCCATCATGCCTGAC  100
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTCCTGCCTCCTGAGTACTGGGATTAAAGGCATGTGCCATCATGCCTGAC  100

seq1  TTGCTAACAGGGTTACAAAACAACAAACAAACATGAGTTGCTTAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAACAGGGTTACAAAACAACAAACAAACATGAGTTGCTTAAAAAAA  150

seq1  ACAACTTATCAAAATGAATAAAATATACAAAGAATCTCAGAGGCCATCCA  200
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACAACTTATCAAAATGAATAAAATATACAAAGAATCTCATAGGCCATCCA  200

seq1  AGTGGTTTTTTTCCTTGTGGCTCAAGGGCCAGACATTATGGGATTTAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTTTTTTCCTTGTGGCTCAAGGGCCAGACATTATGGGATTTAATG  250

seq1  GGCCTGGCCAATATCTTACAGATGTTGGATGGTTATTTATAATGATAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGCCAATATCTTACAGATGTTGGATGGTTATTTATAATGATAGGA  300

seq1  TGTTTAAGAGTGTAATGTGGTGGGT  325
      |||||||||||||||||||| ||||
seq2  TGTTTAAGAGTGTAATGTGG-GGGT  324