BAC Information

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BAC

Clone NameB6Ng01-019D08
Chromosome11 (Build37)
Map Location 19,341,482 - 19,503,627
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665796, Meis1, LOC635455
Downstream geneLOC100042708, Glns-ps1, LOC665868, LOC100041937, Spred2, Actr2, Rab1, Cep68, LOC216544, Slc1a4, LOC100042746, LOC382492, Sertad2, LOC665953
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019D08.bB6Ng01-019D08.g
ACCDH852369DH852370
length1,0201,165
definitionDH852369|Mus musculus domesticus DNA, BAC clone: B6Ng01-019D08, 5' end.DH852370|Mus musculus domesticus DNA, BAC clone: B6Ng01-019D08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,502,611 - 19,503,627)(19,341,482 - 19,342,684)
sequence
gaattcagaatgcaaattaaatttcatgacagctattcgagagatctgac
aagtgccacagaaggtaaaaactaagagttagaatggggaggagcctggg
ttggaagacctggggttgcttcacaaataaatgaggtaagaatggtaaga
agcagagagcaaccagcaaaaccagtggtaagctagggaatgctgttgcc
tgcttgtggggtgtactgtggattcttcagtgggtgctcagctgctgtct
ttatctctggccatagggcaagcagtctaattaatacaagaacttgccca
gagtgatgaaagtctccgtgggtcctatctctgagtctatctcaaaccat
ctatgtagtttgagggaagtgtacctttctcctggcttctgatatctcat
ctcactctatctcccaagggtgtttccagagccctggcatgtttgttttg
aaagacgaaagccattttaccagtgtaaatcattaccttctgcattcaga
ctagttctttttaagcttgcaccttttctatttcaccgtacattttgatt
agagctattttgcaggccatgaaaatgaataatgagtttattcgagttac
tagaactgtgaagatagggtctagaactgatctatacttaactaacttta
tccagggtcggttcatctaaatcgggagcatggattattcctaggctaca
atattccctgcccctcctcttccttttcccatactcattcctgttctctc
ttttcatacttgacttggacacctcagtttagtatgcaaggaaaatagaa
ttaaagggaacttagagtcacttttttattattgctggacaattttgtta
taaaagctgagaatgcaaggccagaacactgctgcggctatgaagggccc
tgcaggacagctgctctccatcacactttatgatcactagcatgagcaga
attatcattgtgcgatggctgcgcatgcagataggctagtggggagtttt
gattggtgggataggaaatg
gaattcagagacacatttggcttgtcactgagggatgctgactcaaaaag
aactagatgaactaccttcatggtagaacatagaataattgacacctagg
gccgggcatagtgccacactcctttaatcacagcacttaagaggcactca
ggcagatctttgtaagttctaggccagtcttgtctacccagtaagtttca
ggtcaggcagggatacatagcaagaccctgtttcaaaacaaaatggcatc
taatataccttaggtctaattaacagtgacatagagagaggaggttataa
caatggaactatatgagaaccgttgcttccatcagcatagtcctccaagc
ctctctcttgaatttcagttattcatagagcctccaggatttccaggcat
gagggttttgcctgtgtggctatttgaaaaattgtgttgggcctgtttat
tttaatatgccttcagatatttttaagggtcttctcttacttccatgttg
ggggtctttctaccagtttgctcaagtccccaagcacatcagatagactt
gaaagtataggcattttctatgcagccctctgttcctgttagaacaggga
gccaccacagaagaggaagggaatgctctcagagtgtcgcttacacccca
gaggctgtaccacccacactcttccctcccggcctctcaaatacatcaga
gaaacatgaaatatgaaaactcacccagatgctcccagtttctccaggcc
cacagtccagcctttgccacctgtgaggagcagagcctagttgagctctg
ggaatacgaaattagttgccactggtgccttgtcatcagcatccaatccc
acgcaaaggcagactatggagccatgtgcctgccacatgtagaatgctgc
tgagccatcttggagagaagggggcgactcctctggggaacttgttgcag
ccagacttctgacttggggatcaagggctagaaggagaagaagaggatag
gtgattgatgcagtaaaaactcccaggcttgccttccaaatggcaagatg
aagaagagaggcaatctagttccttgcaaggctcatcgccctcggggaag
gaaacatctttaaggatgggccaccatgatcttacatgcattggcatgcc
cctttgttaacagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_19502611_19503627
seq2: B6Ng01-019D08.b_44_1063 (reverse)

seq1  CATTTCCTATCCCACCAATCAAAACTCCCCACTAGCCTATCTGCATGCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCTATCCCACCAATCAAAACTCCCCACTAGCCTATCTGCATGCGC  50

seq1  AGCCATCGCACAATGATAATTTCTGCTCATGCTAGTGATCATGAAGTGTG  100
      ||||||||||||||||||| |||||||||||||||||||||| |||||||
seq2  AGCCATCGCACAATGATAA-TTCTGCTCATGCTAGTGATCATAAAGTGTG  99

seq1  ATGGTGAGCAGCTGTCCTGCAGGGCCCTTCATAGCCGCAGCAGTGTTCTG  150
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGAGCAGCTGTCCTGCAGGGCCCTTCATAGCCGCAGCAGTGTTCTG  149

seq1  GCCTTGCATTCTCAGCTTTTATAAC-AAATTGTCCAGCAATAAT-AAAAA  198
      ||||||||||||||||||||||||| |||||||||||||||||| |||||
seq2  GCCTTGCATTCTCAGCTTTTATAACAAAATTGTCCAGCAATAATAAAAAA  199

seq1  GTGACTCTAAGTTCCCTTTAATTCTATTTTCCTTGCATACT-AACTGAGG  247
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTGACTCTAAGTTCCCTTTAATTCTATTTTCCTTGCATACTAAACTGAGG  249

seq1  TGTCCAAGTCAAGTATGAAAAGAGAGAACAGGAATGAGTATGGG-AAAGG  296
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTCCAAGTCAAGTATGAAAAGAGAGAACAGGAATGAGTATGGGAAAAGG  299

seq1  AAGAGGAGGGGCAGGGAATATTGTAGCCTAGGAATAATCCATGCTCCCGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAGGGGCAGGGAATATTGTAGCCTAGGAATAATCCATGCTCCCGA  349

seq1  TTTAGATGAACCGACCCTGGATAAAGTTAGTTAAGTATAGATCAGTTCTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATGAACCGACCCTGGATAAAGTTAGTTAAGTATAGATCAGTTCTA  399

seq1  GACCCTATCTTCACAGTTCTAGTAACTCGAATAAACTCATTATTCATTTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTATCTTCACAGTTCTAGTAACTCGAATAAACTCATTATTCATTTT  449

seq1  CATGGCCTGCAAAATAGCTCTAATCAAAATGTACGGTGAAATAGAAAAGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCCTGCAAAATAGCTCTAATCAAAATGTACGGTGAAATAGAAAAGG  499

seq1  TGCAAGCTTAAAAAGAACTAGTCTGAATGCAGAAGGTAATGATTTACACT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGCTTAAAAAGAACTAGTCTGAATGCAGAAGGTAATGATTTACACT  549

seq1  GGTAAAATGGCTTTCGTCTTTCAAAACAAACATGCCAGGGCTCTGGAAAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAATGGCTTTCGTCTTTCAAAACAAACATGCCAGGGCTCTGGAAAC  599

seq1  ACCCTTGGGAGATAGAGTGAGATGAGATATCAGAAGCCAGGAGAAAGGTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTGGGAGATAGAGTGAGATGAGATATCAGAAGCCAGGAGAAAGGTA  649

seq1  CACTTCCCTCAAACTACATAGATGGTTTGAGATAGACTCAGAGATAGGAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCCTCAAACTACATAGATGGTTTGAGATAGACTCAGAGATAGGAC  699

seq1  CCACGGAGACTTTCATCACTCTGGGCAAGTTCTTGTATTAATTAGACTGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGGAGACTTTCATCACTCTGGGCAAGTTCTTGTATTAATTAGACTGC  749

seq1  TTGCCCTATGGCCAGAGATAAAGACAGCAGCTGAGCACCCACTGAAGAAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTATGGCCAGAGATAAAGACAGCAGCTGAGCACCCACTGAAGAAT  799

seq1  CCACAGTACACCCCACAAGCAGGCAACAGCATTCCCTAGCTTACCACTGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTACACCCCACAAGCAGGCAACAGCATTCCCTAGCTTACCACTGG  849

seq1  TTTTGCTGGTTGCTCTCTGCTTCTTACCATTCTTACCTCATTTATTTGTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTGGTTGCTCTCTGCTTCTTACCATTCTTACCTCATTTATTTGTG  899

seq1  AAGCAACCCCAGGTCTTCCAACCCAGGCTCCTCCCCATTCTAACTCTTAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACCCCAGGTCTTCCAACCCAGGCTCCTCCCCATTCTAACTCTTAG  949

seq1  TTTTTACCTTCTGTGGCACTTGTCAGATCTCTCGAATAGCTGTCATGAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACCTTCTGTGGCACTTGTCAGATCTCTCGAATAGCTGTCATGAAA  999

seq1  TTTAATTTGCATTCTGAATTC  1017
      |||||||||||||||||||||
seq2  TTTAATTTGCATTCTGAATTC  1020

seq1: chr11_19341482_19342684
seq2: B6Ng01-019D08.g_70_1234

seq1  GAATTCAGAGACACATTTGGCTTGTCACTGAGGGATGCTGACTCAAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGACACATTTGGCTTGTCACTGAGGGATGCTGACTCAAAAAG  50

seq1  AACTAGATGAACTACCTTCATGGTAGAACATAGAATAATTGACACCTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGATGAACTACCTTCATGGTAGAACATAGAATAATTGACACCTAGG  100

seq1  GCCGGGCATAGTGCCACACTCCTTTAATCACAGCACTTAAGAGGCACTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGGCATAGTGCCACACTCCTTTAATCACAGCACTTAAGAGGCACTCA  150

seq1  GGCAGATCTTTGTAAGTTCTAGGCCAGTCTTGTCTACCCAGTAAGTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATCTTTGTAAGTTCTAGGCCAGTCTTGTCTACCCAGTAAGTTTCA  200

seq1  GGTCAGGCAGGGATACATAGCAAGACCCTGTTTCAAAACAAAATGGCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGCAGGGATACATAGCAAGACCCTGTTTCAAAACAAAATGGCATC  250

seq1  TAATATACCTTAGGTCTAATTAACAGTGACATAGAGAGAGGAGGTTATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATACCTTAGGTCTAATTAACAGTGACATAGAGAGAGGAGGTTATAA  300

seq1  CAATGGAACTATATGAGAACCGTTGCTTCCATCAGCATAGTCCTCCAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAACTATATGAGAACCGTTGCTTCCATCAGCATAGTCCTCCAAGC  350

seq1  CTCTCTCTTGAATTTCAGTTATTCATAGAGCCTCCAGGATTTCCAGGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTTGAATTTCAGTTATTCATAGAGCCTCCAGGATTTCCAGGCAT  400

seq1  GAGGGTTTTGCCTGTGTGGCTATTTGAAAAATTGTGTTGGGCCTGTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTTTGCCTGTGTGGCTATTTGAAAAATTGTGTTGGGCCTGTTTAT  450

seq1  TTTAATATGCCTTCAGATATTTTTAAGGGTCTTCTCTTACTTCCATGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATGCCTTCAGATATTTTTAAGGGTCTTCTCTTACTTCCATGTTG  500

seq1  GGGGTCTTTCTACCAGTTTGCTCAAGTCCCCAAGCACATCAGATAGACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTTTCTACCAGTTTGCTCAAGTCCCCAAGCACATCAGATAGACTT  550

seq1  GAAAGTATAGGCATTTTCTATGCAGCCCTCTGTTCCTGTTAGAACAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTATAGGCATTTTCTATGCAGCCCTCTGTTCCTGTTAGAACAGGGA  600

seq1  GCCACCACAGAAGAGGAAGGGAATGCTCTCAGAGTGTCGCTTACACCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCACAGAAGAGGAAGGGAATGCTCTCAGAGTGTCGCTTACACCCCA  650

seq1  GAGGCTGTACCACCCACACTCTTCCCTCCCGGCCTCTCAAATACATCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGTACCACCCACACTCTTCCCTCCCGGCCTCTCAAATACATCAGA  700

seq1  GAAACATGAAATATGAAAACTCACCCAGATGCTCCCAGTTTCTCCAGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATGAAATATGAAAACTCACCCAGATGCTCCCAGTTTCTCCAGGCC  750

seq1  CACAGTCCAGCCTTTGCCACCTGTGAGGAGCAGAGCCTAGTTGAGCTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCCAGCCTTTGCCACCTGTGAGGAGCAGAGCCTAGTTGAGCTCTG  800

seq1  GGAATACGAAATTAGTTGCCACTGGTGCCTTGTCAATCAGCATCCAATCC  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GGAATACGAAATTAGTTGCCACTGGTGCCTTGTC-ATCAGCATCCAATCC  849

seq1  CACGCAAAGGCAGACTATGGAGCCATGTGCCTGCCACATGTAGAAATGCT  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CACGCAAAGGCAGACTATGGAGCCATGTGCCTGCCACATGTAG-AATGCT  898

seq1  GCTGAGCCACCTTGGAGAGAAGGGGGGCGACTCCTCTGGGGAACTTGTTG  950
      ||||||||| ||||||||||| ||||||||||||||||||||||||||||
seq2  GCTGAGCCATCTTGGAGAGAA-GGGGGCGACTCCTCTGGGGAACTTGTTG  947

seq1  CAGCCCAGACATCTGACTTGGGGATTCAGGTGCTAGAAGGAAGAAAGAAG  1000
      ||| |||||| ||||||||||||| ||| | ||||||||||   ||||||
seq2  CAG-CCAGACTTCTGACTTGGGGA-TCAAGGGCTAGAAGGA--GAAGAAG  993

seq1  AGGGATAGGTGAATTGATGCAGGTAAAAAACTCCCAGGCTTGCCCATCCA  1050
      | ||||||||| ||||||||||   |||||||||||||||||||  | | 
seq2  A-GGATAGGTG-ATTGATGCAG--TAAAAACTCCCAGGCTTGCC--TTCC  1037

seq1  AAATGGCAAGGATGAAAGACAGAGAGGGCAATCATGTTCCCTTGCAGAGG  1100
      ||||||||| |||| |||| ||||| |||||||  ||| ||||||| |||
seq2  AAATGGCAA-GATG-AAGA-AGAGA-GGCAATCTAGTT-CCTTGCA-AGG  1081

seq1  CTCAGCAGCCCTCGGGGAGAGGAATACATCCTTTAAAAGTGATGGGGTCC  1150
      |||| | ||||||||||| ||||| |||| ||||||    ||||||    
seq2  CTCATC-GCCCTCGGGGA-AGGAA-ACAT-CTTTAA---GGATGGG----  1120

seq1  ACACAATGATCTTAACATGGCAATGGCATGGCACCACTATTGTTAAAACA  1200
       ||| |||||||| |||| ||| |||||||   || || |||||  ||||
seq2  CCACCATGATCTT-ACAT-GCATTGGCATG---CCCCT-TTGTT--AACA  1162

seq1  GAG  1203
      |||
seq2  GAG  1165