BAC Information

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BAC

Clone NameB6Ng01-019H24
Chromosome11 (Build37)
Map Location 110,454,152 - 110,557,612
singlet/doubletdoublet
Overlap genenone
Upstream geneWipi1, Prkar1a, BC029169, 1700012B07Rik, 1700023C21Rik, LOC100041492, Abca8b, Abca8a, Abca9, Abca6, Abca5, Map2k6
Downstream geneLOC100041523, Kcnj16, Kcnj2, LOC667003, LOC100041539, LOC100041559, EG629966
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019H24.bB6Ng01-019H24.g
ACCDH852568DH852569
length807226
definitionDH852568|Mus musculus domesticus DNA, BAC clone: B6Ng01-019H24, 5' end.DH852569|Mus musculus domesticus DNA, BAC clone: B6Ng01-019H24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,454,152 - 110,454,958)(110,557,387 - 110,557,612)
sequence
gaattcttttataagaacaaagtaaatttcaactcacctcatcttcatgc
ctctgccacatcatcccctcccccttctcctggtaagaactctagggtca
ccttgaagaaaaataaagacattagcaaaatccatgaagacttccaagta
agaaaacacgttctgtgttgatactacaaacgtttcatttcttttaaatg
tggaagttataagacaactgaccattgattgctctttggtgaagaactta
atttaaagttgagttaggccatgatgaaaatttgaccatatcatattgtc
atagactggtgggtagacgtagagaaataggatatggcctacagtttaga
tgccattgttaaaccccaaacaaaacatagtgacttgtattggcacattc
atatcgataaggagaaagagagaagagatggatggggaacatttgtgtgt
gtttataagatctcactatatggctcatgctggctttgaacttatgatcc
atctgcctcagccttcctcttatatgttagaattaatagttattatggga
tacctttcctaatagggcatgagacacatatcttgggaattcataacaga
ccaaagtgatggatgggccaaagtacaactttgtgactggatatgtttat
tggagttacttacaggggtgtgggtgaggggttatttacagtagtgagga
tgattgaaaaagcatttgcagttctgaaaatcctacctttaccaggttga
tgtctcattaagctgcaaggctggagcttctagcatgcttgcatatacct
caacaag
ttcctgtatcacttatgaaacttctagtcagcacttgtcatgagcaaagc
acagagtgaaggcaaaattgctccaggtcattccccatgaaatgaataaa
gaaaaagaaaaatatgtgtgtagtgtagttgagagagagcccagcttggg
ctttaagctgtgactgtcatttacaggtgctatcattttaaaaacatctg
catcactgtggggaggggtgggtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_110454152_110454958
seq2: B6Ng01-019H24.b_30_836

seq1  GAATTCTTTTATAAGAACAAAGTAAATTTCAACTCACCTCATCTTCATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTATAAGAACAAAGTAAATTTCAACTCACCTCATCTTCATGC  50

seq1  CTCTGCCACATCATCCCCTCCCCCTTCTCCTGGTAAGAACTCTAGGGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCACATCATCCCCTCCCCCTTCTCCTGGTAAGAACTCTAGGGTCA  100

seq1  CCTTGAAGAAAAATAAAGACATTAGCAAAATCCATGAAGACTTCCAAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAAGAAAAATAAAGACATTAGCAAAATCCATGAAGACTTCCAAGTA  150

seq1  AGAAAACACGTTCTGTGTTGATACTACAAACGTTTCATTTCTTTTAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACACGTTCTGTGTTGATACTACAAACGTTTCATTTCTTTTAAATG  200

seq1  TGGAAGTTATAAGACAACTGACCATTGATTGCTCTTTGGTGAAGAACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTTATAAGACAACTGACCATTGATTGCTCTTTGGTGAAGAACTTA  250

seq1  ATTTAAAGTTGAGTTAGGCCATGATGAAAATTTGACCATATCATATTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGTTGAGTTAGGCCATGATGAAAATTTGACCATATCATATTGTC  300

seq1  ATAGACTGGTGGGTAGACGTAGAGAAATAGGATATGGCCTACAGTTTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTGGTGGGTAGACGTAGAGAAATAGGATATGGCCTACAGTTTAGA  350

seq1  TGCCATTGTTAAACCCCAAACAAAACATAGTGACTTGTATTGGCACATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTGTTAAACCCCAAACAAAACATAGTGACTTGTATTGGCACATTC  400

seq1  ATATCGATAAGGAGAAAGAGAGAAGAGATGGATGGGGAACATTTGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCGATAAGGAGAAAGAGAGAAGAGATGGATGGGGAACATTTGTGTGT  450

seq1  GTTTATAAGATCTCACTATATGGCTCATGCTGGCTTTGAACTTATGATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATAAGATCTCACTATATGGCTCATGCTGGCTTTGAACTTATGATCC  500

seq1  ATCTGCCTCAGCCTTCCTCTTATATGTTAGAATTAATAGTTATTATGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCTCAGCCTTCCTCTTATATGTTAGAATTAATAGTTATTATGGGA  550

seq1  TACCTTTCCTAATAGGGCATGAGACACATATCTTGGGAATTCATAACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTCCTAATAGGGCATGAGACACATATCTTGGGAATTCATAACAGA  600

seq1  CCAAAGTGATGGATGGGCCAAAGTACAACTTTGTGACTGGATATGTTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTGATGGATGGGCCAAAGTACAACTTTGTGACTGGATATGTTTAT  650

seq1  TGGAGTTACTTACAGGGGTGTGGGTGAGGGGTTATTTACAGTAGTGAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTACTTACAGGGGTGTGGGTGAGGGGTTATTTACAGTAGTGAGGA  700

seq1  TGATTG-AAAAGCAGTTGCAGTTCTGAAAATCCTACCTTAACAGGGTTGA  749
      |||||| ||||||| |||||||||||||||||||||||| ||  ||||||
seq2  TGATTGAAAAAGCATTTGCAGTTCTGAAAATCCTACCTTTACCAGGTTGA  750

seq1  TGTCTCATTAAGCTGCAATGCTGGTGCTCCAAGCATAGCTTGCAGATACC  799
      |||||||||||||||||| ||||| ||| | ||||| ||||||| |||||
seq2  TGTCTCATTAAGCTGCAAGGCTGGAGCTTCTAGCAT-GCTTGCATATACC  799

seq1  TCAACAAG  807
      ||||||||
seq2  TCAACAAG  807

seq1: chr11_110557387_110557612
seq2: B6Ng01-019H24.g_75_300 (reverse)

seq1  TCCACCCACCCCTCCCCACAGTGATGCAGATGTTTTTAAAATGATAGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCACCCCTCCCCACAGTGATGCAGATGTTTTTAAAATGATAGCAC  50

seq1  CTGTAAATGACAGTCACAGCTTAAAGCCCAAGCTGGGCTCTCTCTCAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAATGACAGTCACAGCTTAAAGCCCAAGCTGGGCTCTCTCTCAACT  100

seq1  ACACTACACACATATTTTTCTTTTTCTTTATTCATTTCATGGGGAATGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTACACACATATTTTTCTTTTTCTTTATTCATTTCATGGGGAATGAC  150

seq1  CTGGAGCAATTTTGCCTTCACTCTGTGCTTTGCTCATGACAAGTGCTGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCAATTTTGCCTTCACTCTGTGCTTTGCTCATGACAAGTGCTGAC  200

seq1  TAGAAGTTTCATAAGTGATACAGGAA  226
      ||||||||||||||||||||||||||
seq2  TAGAAGTTTCATAAGTGATACAGGAA  226