BAC Information

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BAC

Clone NameB6Ng01-021B10
Chromosome11 (Build37)
Map Location 55,773,624 - 55,774,628
singlet/doubletsinglet
Overlap genenone
Upstream geneTnip1, Anxa6, Ccdc69, Gm2a, LOC667832, Slc36a3, Slc36a2, Slc36a1, Fat2, Sparc, Atox1, G3bp, Glra1
Downstream geneNmur2, LOC100040816, LOC624168
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021B10.bB6Ng01-021B10.g
ACCDH853695DH853696
length991616
definitionDH853695|Mus musculus domesticus DNA, BAC clone: B6Ng01-021B10, 5' end.DH853696|Mus musculus domesticus DNA, BAC clone: B6Ng01-021B10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggcaacaaggtcagggtggtttgtggtctttgtcagaattcag
tgtggggcggggggagaggggcaggagaattggtccttgttataattgaa
ttgaatcttgttatggttatttctctgagaacagctaatattgttttggc
agctgtaggctcagtcattttgaccactaagactatgtttttacatttgt
ttagtcagccagtttctttatctggctctgcacttggcctgctagtacag
tttggaaagtcctttttgaagggggaagatactgggtggtcttgaattca
ttttggatattacagagcattctaacacctctggtaagggagatgaagag
aaaagggcgaaaatgctagataattagaacactcttgtcactacacaaga
cccttagctgtgttctgcctcagagtatctctgcttccctatagtatctg
tgactcttaataactattaccttgataggatctagaatcacctaagaagt
aaacgaccgggtacacaagtattatctaggttatgttagcctctgcttat
gctcgtgagagattattttggttaggttaatcaagtggggagaactgccc
actgtgggtggcatcattctctagcctaggattctagactgtgtaaagaa
aagagagtgagctgaggccaagcatcaattcctttctttcagatgcaatg
agaccagctacttcacacttctccagtagtgtcccctcccatgatggact
ttatggaacggtgaacttaaagaaaacctttctttttaagtggcttttgt
caccgttattttctcaaagcaacaggaaaagtgattgaagatagcatcaa
ctttcttgccctgttctacttgtcctttctctgatccttcgggctttgga
acaactacactctgagaggaagtgacttttaattcttctctgtagcttga
catttcttagcctaccttaattgccacccgtatctaattat
gaattccagtgagaaggaggccctgagaggcattgagtgaagctggggaa
gtgtagtttgggtggtagtggagaccccaagatgttggagaagccatagc
catagccatctaccaagcagagctgcaggcagggtgtggaaccagcctgt
gagaggagcgtgtttcgggcagcaaagctggaggggaagagctatcaagt
tagttacccagacaccagacatagacttacagtatttggctttttcattg
ctgtgttttggtctctctttgacccattatctcctcactgtgacccaatt
ctactcctgcagaatgggaaggtgtatgctttgcaccgttatacattgga
aggatgtaatttgcttttggattttataggggtttacagttaagaaatta
ccttgagtcttaaaagagattttggatttagaacagatttgagaccgtga
tatgggacttttgaagatagaccaaatgcattttgtattgtgatatggtc
atgagattatggggggtagggagcagagtgaggcgatttgaattgtcaat
gtcccccatgaacatcaccagttggaggtgctgttaagatagaggtttat
gggatgtttgaatggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_55773624_55774628
seq2: B6Ng01-021B10.b_46_1036 (reverse)

seq1  ATAATTAAGATACGGGTAGGCAATTAAGGTATGTGCTAAGAAATGTCAAG  50
      |||||| |||||||||| |||||||||||||   ||||||||||||||||
seq2  ATAATT-AGATACGGGT-GGCAATTAAGGTA--GGCTAAGAAATGTCAAG  46

seq1  CTAACAGAGGAAGAACTAAAAGTCACTTTCCTCTCAGAGTTGTAGTTGTT  100
      || ||||| |||||| |||||||||| |||||||||||| ||||||||||
seq2  CT-ACAGA-GAAGAATTAAAAGTCAC-TTCCTCTCAGAG-TGTAGTTGTT  92

seq1  CCCAAAGCCCCGAAGGATCAGAGGACAGGACTAGGTAGAACAGGGCAAGA  150
       |||||| |||||||||||||| || ||||| | ||||||||||||||||
seq2  -CCAAAG-CCCGAAGGATCAGA-GAAAGGAC-AAGTAGAACAGGGCAAGA  138

seq1  AAGTTGATGCTATCTTCAATCACTTTTCCTGTTGCTTTGAGAAAATAACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGATGCTATCTTCAATCACTTTTCCTGTTGCTTTGAGAAAATAACG  188

seq1  GTGACAAAAGCCACTTAAAAAAGAAAGGTTTTCTTTAAGTTCACCGTTCC  250
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTGACAAAAGCCACTT-AAAAAGAAAGGTTTTCTTTAAGTTCACCGTTCC  237

seq1  ATTAAAGTCCATCATGGGAGGGGACACTACTGGAGAAGTGTGAAGTAGCT  300
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TAAAGTCCATCATGGGAGGGGACACTACTGGAGAAGTGTGAAGTAGCT  286

seq1  GGTCTCATTGCATCTGAAAGAAAGGAATTGATGCTTGGCCTCAGCTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCATTGCATCTGAAAGAAAGGAATTGATGCTTGGCCTCAGCTCACT  336

seq1  CTCTTTTCTTTACACAGTCTAGAATCCTAGGCTAGAGAATGATGCCACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTCTTTACACAGTCTAGAATCCTAGGCTAGAGAATGATGCCACCC  386

seq1  ACAGTGGGCAGTTCTCCCCACTTGATTAACCTAACCAAAATAATCTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGGCAGTTCTCCCCACTTGATTAACCTAACCAAAATAATCTCTCA  436

seq1  CGAGCATAAGCAGAGGCTAACATAACCTAGATAATACTTGTGTACCCGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCATAAGCAGAGGCTAACATAACCTAGATAATACTTGTGTACCCGGT  486

seq1  CGTTTACTTCTTAGGTGATTCTAGATCCTATCAAGGTAATAGTTATTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTACTTCTTAGGTGATTCTAGATCCTATCAAGGTAATAGTTATTAAG  536

seq1  AGTCACAGATACTATAGGGAAGCAGAGATACTCTGAGGCAGAACACAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACAGATACTATAGGGAAGCAGAGATACTCTGAGGCAGAACACAGCT  586

seq1  AAGGGTCTTGTGTAGTGACAAGAGTGTTCTAATTATCTAGCATTTTCGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTCTTGTGTAGTGACAAGAGTGTTCTAATTATCTAGCATTTTCGCC  636

seq1  CTTTTCTCTTCATCTCCCTTACCAGAGGTGTTAGAATGCTCTGTAATATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCTTCATCTCCCTTACCAGAGGTGTTAGAATGCTCTGTAATATC  686

seq1  CAAAATGAATTCAAGACCACCCAGTATCTTCCCCCTTCAAAAAGGACTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGAATTCAAGACCACCCAGTATCTTCCCCCTTCAAAAAGGACTTT  736

seq1  CCAAACTGTACTAGCAGGCCAAGTGCAGAGCCAGATAAAGAAACTGGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTGTACTAGCAGGCCAAGTGCAGAGCCAGATAAAGAAACTGGCTG  786

seq1  ACTAAACAAATGTAAAAACATAGTCTTAGTGGTCAAAATGACTGAGCCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACAAATGTAAAAACATAGTCTTAGTGGTCAAAATGACTGAGCCTA  836

seq1  CAGCTGCCAAAACAATATTAGCTGTTCTCAGAGAAATAACCATAACAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCCAAAACAATATTAGCTGTTCTCAGAGAAATAACCATAACAAGA  886

seq1  TTCAATTCAATTATAACAAGGACCAATTCTCCTGCCCCTCTCCCCCCGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTCAATTATAACAAGGACCAATTCTCCTGCCCCTCTCCCCCCGCC  936

seq1  CCACACTGAATTCTGACAAAGACCACAAACCACCCTGACCTTGTTGCCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTGAATTCTGACAAAGACCACAAACCACCCTGACCTTGTTGCCAG  986

seq1  AATTC  1005
      |||||
seq2  AATTC  991