BAC Information

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BAC

Clone NameB6Ng01-021N11
Chromosome11 (Build37)
Map Location 51,487,388 - 51,488,355
singlet/doubletsinglet
Overlap genenone
Upstream geneAdamts2, Zfp354c, 9630041N07Rik, Grm6, Zfp454, Zfp2, Zfp354b, Prop1, Olfr1379-ps1, Olfr1378, Olfr1377, Olfr226-ps1, Olfr51, Olfr54, Olfr1375-ps1, Zfp354a, LOC100040275, LOC382518, Olfr1374-ps1, 5133400J02Rik, LOC622699, BC049762, Clk4, Col23a1, Agxt2l2, Hnrpab, Nola2, Rmnd5b, C330016O10Rik, D930048N14Rik
Downstream gene0610009B22Rik, Sec24a, LOC100040402, Sar1b, Phf15, D11Ertd497e, Ube2b, Cdkl3, LOC100040437, Ppp2ca, Olfr1373, Olfr1372-ps1, Olfr1371, Skp1a, Tcf7, Vdac1, 9530068E07Rik, LOC667659, LOC667667, LOC100040523
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021N11.bB6Ng01-021N11.g
ACCDH854237DH854238
length966169
definitionDH854237|Mus musculus domesticus DNA, BAC clone: B6Ng01-021N11, 5' end.DH854238|Mus musculus domesticus DNA, BAC clone: B6Ng01-021N11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagggcagagtgtggggtatgccagccatacctgtaacagggact
gagggatgctgggagaacctggaggccaggtctgctttaatatgtgaaat
atgcaccttagccccttgtctgtccggggtctgaaaccaaatagtgtcca
ccaggactggagttacaggtggctgtcagctgccatttgagtgctgggaa
ctgaagcctctgaaagagcagtcagtgctgtcatccaatgaggtgtctct
ccaacccctgtcccaggggatcccatgtcctcttccggcctctttgaaca
ctgcacatgtgtggtatctggacattcatgtaggcagaacacccatacac
ataaaataaaaaataaaattcaaaaataaatcctatggtattcatttgta
ttacttgatggcaaggattgttgttgtcttgttctcatagattagaaatg
tgtttacaatctccgtctcacgccatcactaatgtaatagtaacttccag
gtttacacccacacgggctgactgtaactcctgggaagggaagcagcagc
ccctggagtgtacagacagctacgcttgccagctgcttccggacaactgt
gctttgtgagagtaacagtgttagagttcctttttcttttttaattccaa
gccacacatgatggtggcacaggaccctaaccccagtgctttggaaggct
acggcaggtcgattgctagcctgggctacaaaccaaaaaactctaccaaa
gagaagacttgagggaaggcaatgagggaagggacgagggaaggttgagg
aggctatagcacgagtggtatggaggcagaggatttgctcggtgtgcagg
aagttctggttcaatttccagcactacaggaatctggacattgagactca
ctttacattttcagaaggcctggagcagaatgagaatccaatgttttcaa
gttattctcaccaaca
tatgtaaaaggtggaatgagagagccgaccccacaaagctggagtacaca
ccatatacacaccgtggtgtgcacgcctgcacacatatacatatggacag
tcacgatagatagatagatagatagatagatagatagatagatagataga
tagatgatggatggataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_51487388_51488355
seq2: B6Ng01-021N11.b_46_1011 (reverse)

seq1  TGTTGCTGAGAATAACTTG-AAACATCTGATTCTCCTTCTGGCTCCCAGG  49
      ||||| ||||||||||||| ||||||  ||||||| |||| ||| |||||
seq2  TGTTGGTGAGAATAACTTGAAAACATTGGATTCTCATTCT-GCT-CCAGG  48

seq1  CCTTTCCTGAAATTGTAAAGTTGTGTCTCCATGTCCAGATTCCTGTAGTG  99
      ||||  |||||| ||||||| || ||||| ||||||||||||||||||||
seq2  CCTT--CTGAAAATGTAAAG-TGAGTCTCAATGTCCAGATTCCTGTAGTG  95

seq1  CTGGGAATTGAACCAGAGCTTCCTGCACACCGAGCAAATCCTCTGCCTCC  149
      |||| |||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTGGAAATTGAACCAGAACTTCCTGCACACCGAGCAAATCCTCTGCCTCC  145

seq1  ATACCACTCGTGCTATAGCCTCCTCAACCTTCCCTCGTCCCTTCCCTCAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCACTCGTGCTATAGCCTCCTCAACCTTCCCTCGTCCCTTCCCTCAT  195

seq1  TGCCTTCCCTCAAGTCTTCTCTTTGGTAGAGTTTTTTGGTTTGTAGCCCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCCCTCAAGTCTTCTCTTTGGTAGAGTTTTTTGGTTTGTAGCCCA  245

seq1  GGCTAGCAATCGACCTGCCGTAGCCTTCC-AAGCACTGGGGTTAGGGTCC  298
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGCTAGCAATCGACCTGCCGTAGCCTTCCAAAGCACTGGGGTTAGGGTCC  295

seq1  TGTGCCACCATCATGTGTGGCTTGGAATTAAAAAAG-AAAAGGAACTCTA  347
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGTGCCACCATCATGTGTGGCTTGGAATTAAAAAAGAAAAAGGAACTCTA  345

seq1  ACACTGTTACTCTCACAAAGCACAGTTGTCCGGAAGCAGCTGGCAAGCGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTTACTCTCACAAAGCACAGTTGTCCGGAAGCAGCTGGCAAGCGT  395

seq1  AGCTGTCTGTACACTCCAGGGGCTGCTGCTTCCCTTCCCAGGAGTTACAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCTGTACACTCCAGGGGCTGCTGCTTCCCTTCCCAGGAGTTACAG  445

seq1  TCAGCCCGTGTGGGTGTAAACCTGGAAGTTACTATTACATTAGTGATGGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCGTGTGGGTGTAAACCTGGAAGTTACTATTACATTAGTGATGGC  495

seq1  GTGAGACGGAGATTGTAAACACATTTCTAATCTATGAGAACAAGACAACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGACGGAGATTGTAAACACATTTCTAATCTATGAGAACAAGACAACA  545

seq1  ACAATCCTTGCCATCAAGTAATACAAATGAATACCATAGGATTTATTTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCTTGCCATCAAGTAATACAAATGAATACCATAGGATTTATTTTT  595

seq1  GAATTTTATTTTTTATTTTATGTGTATGGGTGTTCTGCCTACATGAATGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTATTTTTTATTTTATGTGTATGGGTGTTCTGCCTACATGAATGT  645

seq1  CCAGATACCACACATGTGCAGTGTTCAAAGAGGCCGGAAGAGGACATGGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATACCACACATGTGCAGTGTTCAAAGAGGCCGGAAGAGGACATGGG  695

seq1  ATCCCCTGGGACAGGGGTTGGAGAGACACCTCATTGGATGACAGCACTGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTGGGACAGGGGTTGGAGAGACACCTCATTGGATGACAGCACTGA  745

seq1  CTGCTCTTTCAGAGGCTTCAGTTCCCAGCACTCAAATGGCAGCTGACAGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTTCAGAGGCTTCAGTTCCCAGCACTCAAATGGCAGCTGACAGC  795

seq1  CACCTGTAACTCCAGTCCTGGTGGACACTATTTGGTTTCAGACCCCGGAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGTAACTCCAGTCCTGGTGGACACTATTTGGTTTCAGACCCCGGAC  845

seq1  AGACAAGGGGCTAAGGTGCATATTTCACATATTAAAGCAGACCTGGCCTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGGGGCTAAGGTGCATATTTCACATATTAAAGCAGACCTGGCCTC  895

seq1  CAGGTTCTCCCAGCATCCCTCAGTCCCTGTTACAGGTATGGCTGGCATAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCTCCCAGCATCCCTCAGTCCCTGTTACAGGTATGGCTGGCATAC  945

seq1  CCCACACTCTGCCCTGAATTC  968
      |||||||||||||||||||||
seq2  CCCACACTCTGCCCTGAATTC  966