MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-024F21
Chromosome	11 (Build37)
Map Location	27,232,542 - 27,233,560
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Fancl, Vrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
Downstream gene	LOC100042377
Link	Open Mouse BAC browser

Click to get alignment info.

name	Fancl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67030 MGI:1914280
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vrk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69922 MGI:1917172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG628586 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628586 MGI:3648261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppia-ps11_266.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606714
definition	note : peptidylprolyl isomerase A pseudogene 11_266.1 pseudo : _no_value

name	OTTMUSG00000005300 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:654472 MGI:3650751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	LOC666270 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666270
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100042367 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042367
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100042377 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042377
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Fancl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981126 GeneID:67030 MGI:1914280
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fanconi anemia, complementation group L transcript_id : NM_025923.2

name	Vrk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377547 GeneID:69922 MGI:1917172
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vaccinia related kinase 2 transcript_id : NM_027260.2

name	EG628586 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353918 GeneID:628586 MGI:3648261
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG628586 transcript_id : NM_001039235.2

name	LOC100042367 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261649 GeneID:100042367
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to translation initiation factor-3 subunit 5 transcript_id : XM_001478048.1

name	Fancl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385416 CCDS:CCDS24485.1 GeneID:67030 MGI:1914280
definition	GO_component : GO:0005635 - nuclear envelope [Evidence IPI]; GO:0005634 - nucleus [Evidence IPI] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0007276 - gametogenesis [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : germ cell deficient; proliferation of germ cells; PHD finger protein 9 product : Fanconi anemia, complementation group L protein_id : NP_080199.1

name	Vrk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312468 CCDS:CCDS24486.1 GeneID:69922 MGI:1917172
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA] codon_start : 1 exception : mismatches in translation note : vaccinia virus BIR kinase related kinase 2 product : vaccinia related kinase 2 protein_id : NP_081536.1

name	EG628586 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85986635 GeneID:628586 MGI:3648261
definition	codon_start : 1 product : hypothetical protein LOC628586 protein_id : NP_001034324.1

name	LOC100042367 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261650 GeneID:100042367
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478098.1

name	LOC666270 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666270
definition	number : 1 pseudo : _no_value

name	LOC666270 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666270
definition	number : 2 pseudo : _no_value

name	LOC666270 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666270
definition	number : 3 pseudo : _no_value

name	LOC666270 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666270
definition	number : 4 pseudo : _no_value

name	LOC666270 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666270
definition	number : 5 pseudo : _no_value

name	LOC666270 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666270
definition	number : 6 pseudo : _no_value

name	LOC100042377 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042377
definition	number : 2 pseudo : _no_value

name	LOC100042377 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042377
definition	number : 1 pseudo : _no_value

name	OTTMUSG00000005300 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:85662718 GeneID:654472 MGI:3650751
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, OTTMUSG00000005300 pseudo : _no_value transcript_id : NR_002890.1

clone name	MSMg01-104O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521E23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-425L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-528I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508N13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-407A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257J14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-024F21.b	B6Ng01-024F21.g
ACC	DH856023	DH856024
length	1,165	1,018
definition	DH856023\|Mus musculus domesticus DNA, BAC clone: B6Ng01-024F21, 5' end.	DH856024\|Mus musculus domesticus DNA, BAC clone: B6Ng01-024F21, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcagctgaggaatactgaatggctgagaagcacctgaaaaaaat gttcaacatctttaatcatcaggaaaatgtaagtcaaaacaactctgaga ttccacctcacacctgtcagaatggctaagatcaaaattcaggtgacagc agatgctggtggggatgtggagaaagaggaacactcctccattgttaatg ggtttgcaaactggtacaaccactctggaaatcaatctggtagttcctca gaaaattggacatagtactaccggatgatccagcaatgccactcctggcc atatacacagaaaatgttccaacctttaataaggatacatgctccagtat gttcatagcagccttatttataatagcctgaagctggaaagaacccagat gtctgtcaacagaagaatggatacagaaaatgtggtacatttacacagta gagtattactcagcaatgaaaaacaatgaattcctgaaatcctaaggcaa atggatggatctggaggatatcatcctgagtgaggtaacccaatcacaaa agaacacacatgagatgcactcactgataagtggctattagcccagaaac ttagaatacccaagatacaatttgcaaaacacatgaaactcaagaagaag gaaaaacaaagtgagaatacttcattccttcttagaatggggacaaaata cccatggtaggagttacagagacaaagttcagagctcagatggaagaaag gaccatccagagactgccccaccagggaatccctcctatatacaaccacc aaacccagacactatttcatatgccagaaagattttgctgacaggaccct gatatagctatttcttgtgaggctatgccagtgcctggcaatacagaagt gaatgctcacagtcatctattggatggaacacagaccataatgaaggagc tagagaaagtaccaaggagctaaaggggtctgcaccctatagagaacaca tttgaactactagtcccccaaagctgtgtctctagttgcatttctagcaa gatgctagtcacccatcaatgggaagaaagtccttggtctggtagaatac atgtcccagggaatccaggacaagaagacaggagtgggtgatttggatca ggctggggggtggat	gaattcagagtagttttgatttacatttctttgatgactaaagacattgc acattaagtatttttattctattcaaggttcctctgttaagaattttgtt tagttctgtgacccatttttaaattgggtttttgggtttgttggtgtcaa atttcttgaatcagaatatattttggacatgatatgctagggaatctttt gtggatttgtaatcagtaaggggaacttgaagtcccatgcctgacatggt gccatatgttagattgccataggttaaagtcccctgtggtcaattggata caagggccaacagaagagacatttgtggtaaagaagagaatttcctccat gggccaggtatcttctaatcatcatatagttgtaactaagtccaagaagg gcaaacccaaactcacactggaaaagaaaaaaacagggtagggttgggtg tttgctgccacaagcaaaagaatggagggcaggggctccaaagcccagaa ctcatcaacactcccaggctgaagaaaaattaagaaaaacaatatgtaaa ttaaatctcttggttctggtcttctggctacttaatcatcctctggtcca tggccaagcaaatttctcttgaggatgtccatattggtgcacttgcattc tggggaaaaacaaaaacataatctcaccaccttgttagaagtggagcttg atggctgccattgagaggttattgagaccctccatctaattaagaggtgg ggagagtccctcggcaaaaatgcccaatgtttataagcagagctcagccc tttcttcatcaagagaaagttcacatggaactttcccacaacgctagatg tgaatctcttttagattcttgggaggtgacctgagcaagtgcttccttca aggagagatttgcctcttctatattgcttggtctggagattataagggta tcctaaagagtgactgattctcctgaagaataaaaaagacactggaccgg ctgagaagagaggcagat
quality values	Open. Hide. 61 41 38 27 61 46 50 28 16 37 53 61 61 61 55 61 55 55 55 61 61 61 55 55 52 47 61 61 49 61 55 44 28 55 55 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 59 61 59 61 61 61 61 61 61 59 55 55 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 55 59 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 43 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 53 61 52 61 61 61 50 61 61 61 52 52 61 61 61 61 61 61 61 45 61 53 53 53 53 57 42 32 57 53 53 50 53 47 32 53 57 57 57 57 53 57 53 57 47 53 45 53 47 46 57 47 19 28 47 57 53 42 24 43 57 57 42 57 57 20 47 52 57 57 57 53 42 47 53 57 53 57 57 53 53 41 47 53 53 50 53 57 53 43 47 52 50 47 53 53 50 45 45 50 42 57 50 45 53 57 57 47 37 30 24 57 57 30 50 45 37 47 39 32 53 47 47 39 53 53 53 53 30 50 46 38 52 42 50 57 40 47 42 17 53 57 45 46 47 45 41 35 52 24 37 52 30 50 32 52 36 52 35 30 46 24 52 57 53 33 39 37 20 53 34 52 38 52 31 27 53 36 32 28 37 53 24 46 52 53 31 30 34 27 32 57 43 53 25 30 31 53 53 44 34 52 42 40 37 31 33 28 37 14 44 31 52 30 39 41 24 53 42 28 53 46 25 37 37 24 21 33 35 31 44 57 43 24 27 37 30 35 37 29 30 23 7 30 57 43 28 32 16 57 57 57 33 36 34 30 32 21 21 15 38 30 17 39 32 31 31 34 28 29 39 32 30 25 30 24 26 51 40 30 32 24 24 14 27 26 33 15 6 30 27 29 28 25 23 21 25 29 29 18 29 30 23 30 17 46 37 29 31 35 20 27 36 38 27 39 25 21 29 19 13 10 29 28 25 29 19 28 33 35 15 26 29 34 25 25 29 35 28 17 13 25 35 26 35 14 13 21 10 8 28 27 46 12 29 16 24 18 29 27 23 24 6 23 15 29 34 20 28 35 33 34 51 26 21 21 19 26 21 10 30 28 28 28 17 23 15 27 41 12 21 51 51 25 16 25 28 20 8 20 16 36 17 18 12 23 16 33 10 8 15 15 7 26 17 11 8 8 9 8 30 23 20 19 26 13 30 23 12 21 23 28 38 31 25 6 38 25 10 14 19 15 7 16 22 14 28 15 30 31 19 30 29 21 9 5 8 5 8 13 13 31 26 11 17 14 13 8 8 24 4 11 31 13 25 15 9 18 30 22 8 22 13 14 9 14 24 30 13 12 10 8 7 10 7 6 3 6 9 7 13 18 21 6 5 11 5 5 3 3 3 9 13 22 8 10 5 17 12 12 24 31 5 3 6 30 20 28 15 8 5 9 5 7 7 8 6 13 9 4 27 8 7 7 12 9 12 11 14 8 11 24 31 5 10 22 4 3 9 12 10 9 7 4 6 8 14 10 5 6 8 4 6 7 25 10 4 8 4 3 6	Open. Hide. 55 47 55 49 52 36 22 11 43 28 43 36 19 36 52 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 55 61 61 55 52 55 61 61 61 55 61 55 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 47 55 55 61 61 61 55 61 55 61 61 61 61 61 61 61 61 43 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 47 53 50 61 47 50 61 47 43 36 50 45 50 61 61 53 61 50 61 53 61 50 53 61 61 61 50 61 61 50 53 43 61 61 61 53 61 52 47 35 47 42 47 61 61 61 39 39 61 53 53 61 53 52 61 61 43 61 53 53 52 53 50 34 19 42 38 61 53 61 45 61 61 31 61 57 47 42 36 39 42 36 57 34 57 47 47 57 57 50 53 57 57 57 57 42 40 53 57 47 42 47 42 57 57 57 53 53 53 53 52 53 36 45 57 50 53 57 46 45 53 53 45 45 53 39 47 47 50 50 53 57 53 53 57 53 50 43 53 37 47 53 52 52 53 57 32 53 47 40 52 53 53 39 18 18 53 17 50 53 50 52 57 52 41 39 50 42 50 53 53 45 38 57 38 24 50 45 34 16 24 41 45 38 37 47 22 28 53 38 34 34 39 46 46 42 37 57 53 42 47 38 57 43 35 46 57 57 57 33 34 16 57 52 50 12 24 35 53 50 24 34 33 41 36 36 22 14 34 19 37 45 34 52 24 32 31 35 50 53 30 40 38 50 46 18 15 34 9 34 36 42 52 53 29 50 31 28 28 33 28 50 50 52 36 52 33 21 8 47 27 27 52 53 28 18 14 7 11 10 37 17 29 14 27 19 23 17 40 20 47 33 40 30 33 6 38 15 25 57 57 31 53 29 34 14 20 11 13 19 40 40 30 40 24 25 47 53 57 24 21 23 9 37 33 23 24 30 41 22 57 35 30 30 25 39 22 29 23 28 53 17 33 32 29 24 15 44 45 30 22 48 17 46 9 9 10 8 30 32 33 43 24 48 22 36 51 30 23 17 11 16 10 24 17 28 30 24 17 17 12 16 27 5 14 17 20 17 39 17 28 34 19 28 30 32 31 31 15 48 35 25 20 29 29 23 21 32 28 48 47 27 14 6 29 25 21 29 15 33 51 37 18 26 19 18 7 15 29 10 29 28 32 19 12 24 18 25 22 7 19 25 29 28 29 22 31 19 16 12 18 14 24 19 5 18 8 11 5 39 29 7 6 6 7 19 39 20 14 13 29 16 24 8 24 29 29 28 14 29 33 23 29 18 4 12 6 4 30 21 15 10 12 6 7 19 36 28 19 25 11 30 29 15 23 36 17 36 11 7 8 20 25 26 29 21 26 7 6 17 14 27 13 16 12 14 8 18 12 9 12 9 42 18 31 17 7 5 18 14 5 13 12 12 23 9 9 6 10 8 12 14 14 26 6 9 9 12 8 7 10 6 8 6 7 5 4 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr11_27232542_27233560
seq2: B6Ng01-024F21.g_68_1085 (reverse)

seq1  ATCTGCCTACTCATCTCAG-CAGTCCAGTGTC-TTTTTATCCTCATGGAG  48
      |||||||| ||| |||||| | |||||||||| ||||||| ||   ||||
seq2  ATCTGCCT-CTCTTCTCAGCCGGTCCAGTGTCTTTTTTATTCTTCAGGAG  49

seq1  GATCAGTCACTCCTTTAGGATACCC-TATAATCTCCAAGACCAAGCAATT  97
       |||||||||| ||||||||||||| |||||||||| ||||||||||| |
seq2  AATCAGTCACT-CTTTAGGATACCCTTATAATCTCC-AGACCAAGCAA-T  96

seq1  ATAGAAAGAGCAAATCTCTCCTTGAAGGAAGCACTTGCTCAGGTCACCTC  147
      ||||||   |||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGAGGCAAATCTCTCCTTGAAGGAAGCACTTGCTCAGGTCACCTC  146

seq1  CCAAGAATCTAAAAGAGATTCACATCTAGCGTTGGTGGGAAGTTCCATGT  197
      ||||||||||||||||||||||||||||||||||  || |||||||||||
seq2  CCAAGAATCTAAAAGAGATTCACATCTAGCGTTGTGGGAAAGTTCCATGT  196

seq1  GAACTTTCTCTTTGATG-AGGAAGGGCTGAGCTCTGCTTATAAACATTGG  246
      |||||||||| |||||| || |||||||||||||||||||||||||||||
seq2  GAACTTTCTC-TTGATGAAGAAAGGGCTGAGCTCTGCTTATAAACATTGG  245

seq1  GCATTTTTGCCGAGGGACTCTCCCCACCTCTTAATTAGATGGAGGGTCTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTGCCGAGGGACTCTCCCCACCTCTTAATTAGATGGAGGGTCTC  295

seq1  AATAACCTCTCAATGGCAGCCATCAAGCTCCACTTCTAACAAGGTGGTGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCTCTCAATGGCAGCCATCAAGCTCCACTTCTAACAAGGTGGTGA  345

seq1  GATTATGTTTTTGTTTTTCCCCAGAATGCAAGTGCACCAATATGGACATC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATGTTTTTGTTTTTCCCCAGAATGCAAGTGCACCAATATGGACATC  395

seq1  CTCAAGAGAAATTTGCTTGGCCATGGACCAGAGGATGATTAAGTAGCCAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAGAAATTTGCTTGGCCATGGACCAGAGGATGATTAAGTAGCCAG  445

seq1  AAGACCAGAACCAAGAGATTTAATTTACATATTGTTTTTCTTAATTTTTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAGAACCAAGAGATTTAATTTACATATTGTTTTTCTTAATTTTTC  495

seq1  TTCAGCCTGGGAGTGTTGATGAGTTCTGGGCTTTGGAGCCCCTGCCCTCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCTGGGAGTGTTGATGAGTTCTGGGCTTTGGAGCCCCTGCCCTCC  545

seq1  ATTCTTTTGCTTGTGGCAGCAAACACCCAACCCTACCCTGTTTTTTTCTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTGCTTGTGGCAGCAAACACCCAACCCTACCCTGTTTTTTTCTT  595

seq1  TTCCAGTGTGAGTTTGGGTTTGCCCTTCTTGGACTTAGTTACAACTATAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTGTGAGTTTGGGTTTGCCCTTCTTGGACTTAGTTACAACTATAT  645

seq1  GATGATTAGAAGATACCTGGCCCATGGAGGAAATTCTCTTCTTTACCACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTAGAAGATACCTGGCCCATGGAGGAAATTCTCTTCTTTACCACA  695

seq1  AATGTCTCTTCTGTTGGCCCTTGTATCCAATTGACCACAGGGGACTTTAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTCTTCTGTTGGCCCTTGTATCCAATTGACCACAGGGGACTTTAA  745

seq1  CCTATGGCAATCTAACATATGGCACCATGTCAGGCATGGGACTTCAAGTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGCAATCTAACATATGGCACCATGTCAGGCATGGGACTTCAAGTT  795

seq1  CCCCTTACTGATTACAAATCCACAAAAGATTCCCTAGCATATCATGTCCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTACTGATTACAAATCCACAAAAGATTCCCTAGCATATCATGTCCA  845

seq1  AAATATATTCTGATTCAAGAAATTTGACACCAACAAACCCAAAAACCCAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATTCTGATTCAAGAAATTTGACACCAACAAACCCAAAAACCCAA  895

seq1  TTTAAAAATGGGTCACAGAACTAAACAAAATTCTTAACAGAGGAACCTTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATGGGTCACAGAACTAAACAAAATTCTTAACAGAGGAACCTTG  945

seq1  AATAGAATAAAAATACTTAATGTGCAATGTCTTTAGTCATCAAAGAAATG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAATAAAAATACTTAATGTGCAATGTCTTTAGTCATCAAAGAAATG  995

seq1  TAAATCAAAACTACTCTGAATTC  1019
      |||||||||||||||||||||||
seq2  TAAATCAAAACTACTCTGAATTC  1018

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information