BAC Information

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BAC

Clone NameB6Ng01-024N10
Chromosome11 (Build37)
Map Location 40,063,942 - 40,209,789
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100039241, LOC382508, LOC432549, Mat2b, Hmmr, Nudcd2, Ccng1, LOC100039256, LOC100039285
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024N10.bB6Ng01-024N10.g
ACCDH856355DH856356
length1,148475
definitionDH856355|Mus musculus domesticus DNA, BAC clone: B6Ng01-024N10, 5' end.DH856356|Mus musculus domesticus DNA, BAC clone: B6Ng01-024N10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,063,942 - 40,064,729)(40,209,309 - 40,209,789)
sequence
gaattctacaagacttaaaggaagagttaataccaatactccttaaactt
ttctacaaaatagaaatacaaggaacactcccaagcttatcttatgagcc
cacagtcaccttgatacctaaaccacacagattcaacaaagaaaaagaat
ttcagaccaatttccctcgtgaatcttgatgcaaaaaatactcaggaaaa
tattcacaaactaaattcaagaacacatcataaaatatcatctaccatga
tcaagtagggttcatcccagtgatgcacagatgattcaatatacaaaaat
ctaccaacctaatccaccatagaaacaaactgaaagaacaaaaccacatg
attatctcagtagattctgaaaaattcctttgcaaaatccaacacccctt
catgttaaatcttgtagcgatcacatatacaagaagcataactaaacata
atcaaagcaatatacagcaggtcaatagccagcatcaaattaaatggaaa
gaaacttaaagcaaatccactaaaatcagggacaaggctaacccactctc
tattcaacatagttcttgaatttccagctagagaaataagacaattaaag
gagacgaagggatgcaaattataaaggaaggagtcaaatgtcaggatttg
cagatgataatgatagtatcatacataagtgacctcaaaaattctaccag
agaactcaaagattccgctgaaaaacaccttaagcaaagtggcttgataa
ttaactaaaaattaactaaaaaaaaaaaaaaatcagtattcttcctttat
acaaatgataaatgggctaagaaagaaactaatgaaacacacccttttat
aatagccccaaatagtataaaaacccttttagattttcaaatactaatat
agtatagagatcttcctagggttccaagccatacaaatatctgtcattct
gctgagttgaatgttaaatgtttgagtactgagtcccagattgtagtgat
tatttcaagaggaagagagacccttgaatggtgaggcttgcttgagataa
cagttactgggtttgactttgcagtatagcttgcctcacttgccgccttt
ccttacatttttggactgtggatttctgtgtttccacaccctgttctt
aatggcctttcaagaggtgccatgctttgtgtctgcacatgtttggaact
gctgactattaacactgataagtggtgtttataagccaaagaaaatgtaa
caaagtcgctacagatacccacagaccctttcttatttaactaaggaagc
tggggatggtgacatgtctgcaatctagtaatccctgtttagggaacaca
gcggctgacacatcatgagttcaaaaccagcttgggctctctactgagag
cccctaggacccggtatcaagagacaaaaacaaaaactccaaaccaaacc
aactccaagaacaacatggacctctgtaagaagttagaatcattgggaca
tggactctgatcagttaggagttggtttaatgtcgtgagatgtgtttgag
taaagcactccaagaatagcacagttgtttggaaaagttttcttttagtt
ttgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_40063942_40064729
seq2: B6Ng01-024N10.b_418_1191

seq1  TTCCTTTGCAAAATCCAACACCCCTTCATGTTAAATCTTGTAGCGATCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGCAAAATCCAACACCCCTTCATGTTAAATCTTGTAGCGATCAC  50

seq1  ATATACAAGAAGCATAACTAAACATAATCAAAGCAATATACAGCAGGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAGAAGCATAACTAAACATAATCAAAGCAATATACAGCAGGTCA  100

seq1  ATAGCCAGCATCAAATTAAATGGAAAGAAACTTAAAGCAAATCCACTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAGCATCAAATTAAATGGAAAGAAACTTAAAGCAAATCCACTAAA  150

seq1  ATCAGGGACAAGGCTAACCCACTCTCTATTCAACATAGTTCTTGAATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGACAAGGCTAACCCACTCTCTATTCAACATAGTTCTTGAATTTC  200

seq1  CAGCTAGAGAAATAAGACAATTAAAGGAGACGAAGGGATGCAAATTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGAGAAATAAGACAATTAAAGGAGACGAAGGGATGCAAATTATAA  250

seq1  AGGAAGGAGTCAAATGTCAGGATTTGCAGATGATAATGATAGTATCATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAGTCAAATGTCAGGATTTGCAGATGATAATGATAGTATCATAC  300

seq1  ATAAGTGACCTCAAAAATTCTACCAGAGAACTCAAAGATTCCGCTGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGACCTCAAAAATTCTACCAGAGAACTCAAAGATTCCGCTGAAAA  350

seq1  ACACCTTAAGCAAAGTGGCTTGATAATTAACTAAAAATTAACTAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTAAGCAAAGTGGCTTGATAATTAACTAAAAATTAACTAAAAAAA  400

seq1  AAAAAAAATCAGTATTCTTCCTTTATACAAATGATAAATGGGCTAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATCAGTATTCTTCCTTTATACAAATGATAAATGGGCTAAGAAA  450

seq1  GAAACTAATGAAACAACACCC-TTTATAATAGCCCCAAATAGTAT-AAAA  498
      |||||||||||||| |||||| ||||||||||||||||||||||| ||||
seq2  GAAACTAATGAAAC-ACACCCTTTTATAATAGCCCCAAATAGTATAAAAA  499

seq1  CCCTTTTAGATTTTCAAATACTAATATAGTATAGAGATCTTCCTAGGTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||| | 
seq2  CCCTTTTAGATTTTCAAATACTAATATAGTATAGAGATCTTCCTAGGGTT  549

seq1  CCAAGCCATACAAATATCTGTCAATCTGCTGAGGTTTGAATGTTAAATGT  598
      ||||||||||||||||||||||| |||||||||  |||||||||||||||
seq2  CCAAGCCATACAAATATCTGTCATTCTGCTGAG--TTGAATGTTAAATGT  597

seq1  TTGAGTACTGAGTTCCCAGATTGTAGTGA-TATATCAGGAGGAAGAGAGA  647
      |||||||||||| |||||||||||||||| ||| ||| ||||||||||||
seq2  TTGAGTACTGAG-TCCCAGATTGTAGTGATTATTTCAAGAGGAAGAGAGA  646

seq1  CCCTTGAATGGTAGAGCCTTGCTTGAGATAACAGGTTACTGGGTTTGGAC  697
      |||||||||||| ||| |||||||||||||||| |||||||||||||   
seq2  CCCTTGAATGGT-GAGGCTTGCTTGAGATAACA-GTTACTGGGTTTG--A  692

seq1  CTTTGCAAGTTATAGCCTTGCCTCACTTGCCGCC-TTCTCTACAATTTTT  746
      |||||||   ||||| |||||||||||||||||| |||  ||||    ||
seq2  CTTTGCA--GTATAG-CTTGCCTCACTTGCCGCCTTTCCTTACA----TT  735

seq1  TTTGGACTGTGGATTTCATGTGTTTGTCCACACTCTGTTCTT  788
      ||||||||||||||||| ||||||  ||||||| ||||||||
seq2  TTTGGACTGTGGATTTC-TGTGTT--TCCACACCCTGTTCTT  774

seq1: chr11_40209309_40209789
seq2: B6Ng01-024N10.g_68_548 (reverse)

seq1  CACACACACACACACACACACACAAAACTAAAAGAAAACTTTTCCAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACAAAACTAAAAGAAAACTTTTCCAAACA  50

seq1  ACTGTGCTATTCTTGGAGTGCTTTACTCAAACACATCTCACGACATTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCTATTCTTGGAGTGCTTTACTCAAACACATCTCACGACATTAAA  100

seq1  CCAACTCCTAACTGATCAGAGTCCATGTCCCAATGATTCTAACTTCTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCCTAACTGATCAGAGTCCATGTCCCAATGATTCTAACTTCTTAC  150

seq1  AGAGGTCCATGTTGTTCTTGGAGTTGGTTTGGTTTGGAGTTTTTGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCCATGTTGTTCTTGGAGTTGGTTTGGTTTGGAGTTTTTGTTTTT  200

seq1  GTCTCTTGATACCGGGTCCTAGGGGCTCTCAGTAGAGAGCCCAAGCTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTGATACCGGGTCCTAGGGGCTCTCAGTAGAGAGCCCAAGCTGGT  250

seq1  TTTGAACTCATGATGTGTCAGCCGCTGTGTTCCCTAAACAGGGATTACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACTCATGATGTGTCAGCCGCTGTGTTCCCTAAACAGGGATTACTA  300

seq1  GATTGCAGACATGTCACCATCCCCAGCTTCCTTAGTTAAATAAGAAAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCAGACATGTCACCATCCCCAGCTTCCTTAGTTAAATAAGAAAGGG  350

seq1  TCTGTGGGTATCTGTAGCGACTTTGTTACATTTTCTTTGGCTTATAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGGTATCTGTAGCGACTTTGTTACATTTTCTTTGGCTTATAAACA  400

seq1  CCACTTATCAGTGTTAATAGTCAGCAGTTCCAAACATGTGCAGACACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTATCAGTGTTAATAGTCAGCAGTTCCAAACATGTGCAGACACAAA  450

seq1  GCATGGCACCTCTTGAAAGGCCATTGAATTC  481
      |||||||||||||||||||||||||||||||
seq2  GCATGGCACCTCTTGAAAGGCCATTGAATTC  481