BAC Information

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BAC

Clone NameB6Ng01-026D01
Chromosome11 (Build37)
Map Location 12,422,452 - 12,549,154
singlet/doubletdoublet
Overlap genenone
Upstream geneIkzf1, Fignl1, Ddc, Grb10, Cobl
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026D01.bB6Ng01-026D01.g
ACCDH857305DH857306
length1,135826
definitionDH857305|Mus musculus domesticus DNA, BAC clone: B6Ng01-026D01, 5' end.DH857306|Mus musculus domesticus DNA, BAC clone: B6Ng01-026D01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,548,007 - 12,549,154)(12,422,452 - 12,423,273)
sequence
gaattcaagagaggactgtggagaggctggaggtagaaggaggaagtgat
ataattttatttcaattagaaacatttttaaatatgcaagataaataagc
aaacatacgtgaggatgcaactctcaaaaaatctccccagaacaggtatg
atatatcctcttgattaccaatttggtctaatctataatcttgataggag
gccctataaagtatcaactttgccagtgtatcacaagacatttaaatttc
atggggagaattgataacttgttgttataccagaggacattcaaaccctc
actggaaatgttagctagtttatcaaataatgatcaagcttagaagtcat
tgagggtgggtctgtccccttcataatcagctttggcctatacatcctgt
ttccttaataacagacaaatttaagaaaaatgtactatcttagggtttta
ttgctgtgaaaagaatccatgactgtcttagtcatggtttctattcctgc
acaaaacatcataaacaagaagcaaggtggggaagaaagggtttattcag
cttacacttccacattgctgctcatcactaaagaaagtcaggactgaaac
tctagcatgtcaggaggcaggggctgatggagaggccacggagggatatt
acttatgggcttgctcctcctggttttctcagcttgcttgctttcttttt
ttttttcttttcttcagctgactgcaagagggtttattgtacacgagcta
cacttggccacaagagaacagagctagtccagagtgccgggggtccaggg
cagagggccagcgggactgttttggttaagaaaagcggtcatttctccag
gcgatcctggcgagatgacgttccaggtctactgagactcattaccgatg
gcagcacacagtccgatagcttgtcccagccctcaacattccttcacttc
tgctctgcagcgtcttgggtgcacgggctgacttactagacctcttgctc
atctttcttctcttgtgcttcagcctgcgcattctctcttcgccacttcg
ctctcatggccaaggagttcagaagatggcgctaagactcaaatctacag
ccagagatgtacacccccaatgggccctccactct
gaattccaagcccatggtcagctcaaggactttctaggacgttggaacac
tggtgaaggcttagctatgtcagaattcaatcttaaaaggcacttataat
aagataatattaaaagagagcacgtggatacatacaccagactaatgcga
gaatagggtttgagtaaagagaatgccagactccaggaggtgagtttcct
tgaaactctctgcctcgtgagtggcttccaggcctcttggcctgtcaagc
tgactctactggagtgggtggcaatacttactctgtgtggtagtttgaat
atacttgccccagggagtggcgctattaggaggtatggccttggtggagg
aaatgtgtcactgtgggcatggtccttaggaacttcttcctagctgccta
gctgtcttcccctcatgaccttcagatgaagatgtagaactctcagctcc
tcctgcaccatgcctgcctagacactagaccagttttcctacctatggga
aactgtggagaccctctgctccaagatgttacattctctatcacactctg
aatgtttttctcagagaatttgtttcctctaatcacctttttcgagagat
atctgtttgtttttagttggattttctaattctttgtccttatcttattt
cctcttgcatcatcagtgcgtgatgtatcctttatggattatttttttta
attaggtatttttcctcgtttacatttttcaatgctatccccaaaggtcc
cccatacccacccctccaatcccctacccccccactcccccttttgggcc
cggggtttcccctgtacgggggcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12548007_12549154
seq2: B6Ng01-026D01.b_46_1180 (reverse)

seq1  AGAGTGGGAGGGCCCATTGTGGGTGGTACCATCTCTGGGCTGGTAGTATT  50
      ||||| ||||||||||||| |||| ||| ||||||| |||| |||| |||
seq2  AGAGT-GGAGGGCCCATTGGGGGT-GTA-CATCTCT-GGCT-GTAG-ATT  44

seq1  GGGTTCTTAGCGCCATCTTCCTTGAGACTCCTGTGCCATGAGAGCGAAGT  100
       |  ||||||||||||||||  ||| ||||||  ||||||||||||||||
seq2  TGAGTCTTAGCGCCATCTTC--TGA-ACTCCTTGGCCATGAGAGCGAAGT  91

seq1  GGCGGAAGAAGAGAATGCGCAGGCTGAAGCACAAGAGAAGAAAGATGAGG  150
      ||| |||| |||||||||||||||||||||||||||||||||||||||| 
seq2  GGC-GAAG-AGAGAATGCGCAGGCTGAAGCACAAGAGAAGAAAGATGAGC  139

seq1  CAGAGGTCTAAGTAAGTCAGCCCGTGCACCCAAGACGCCTGCAGGAGCAG  200
       |||||||| ||||||||||||||||||||||||||| ||||| ||||||
seq2  AAGAGGTCT-AGTAAGTCAGCCCGTGCACCCAAGACG-CTGCA-GAGCAG  186

seq1  AAGTG-AGGGATGTTGAGGGCTGGGACAAGCTATCGGACTGTGTGCTGCC  249
      ||||| ||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAGGAATGTTGAGGGCTGGGACAAGCTATCGGACTGTGTGCTGCC  236

seq1  ATCGGTAATGAGTCTCAGTAGACCTGGAACGTCATCTCGCCAGGATCGCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGTAATGAGTCTCAGTAGACCTGGAACGTCATCTCGCCAGGATCGCC  286

seq1  TGGAGAAATGACCGCTTTTCTTAACCAAAACAGTCCCGCTGGCCCTCTGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAATGACCGCTTTTCTTAACCAAAACAGTCCCGCTGGCCCTCTGC  336

seq1  CCTGGACCCCCGGCACTCTGGACTAGCTCTGTTCTCTTGTGGCCAAGTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACCCCCGGCACTCTGGACTAGCTCTGTTCTCTTGTGGCCAAGTGT  386

seq1  AGCTCGTGTACAATAAACCCTCTTGCAGTCAGCTGAAGAAAAGAAAAAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCGTGTACAATAAACCCTCTTGCAGTCAGCTGAAGAAAAGAAAAAAA  436

seq1  AAAAGAAAGCAAGCAAGCTGAGAAAACCAGGAGGAGCAAGCCCATAAGTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGCAAGCAAGCTGAGAAAACCAGGAGGAGCAAGCCCATAAGTA  486

seq1  ATATCCCTCCGTGGCCTCTCCATCAGCCCCTGCCTCCTGACATGCTAGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCCTCCGTGGCCTCTCCATCAGCCCCTGCCTCCTGACATGCTAGAG  536

seq1  TTTCAGTCCTGACTTTCTTTAGTGATGAGCAGCAATGTGGAAGTGTAAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTCCTGACTTTCTTTAGTGATGAGCAGCAATGTGGAAGTGTAAGC  586

seq1  TGAATAAACCCTTTCTTCCCCACCTTGCTTCTTGTTTATGATGTTTTGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAACCCTTTCTTCCCCACCTTGCTTCTTGTTTATGATGTTTTGTG  636

seq1  CAGGAATAGAAACCATGACTAAGACAGTCATGGATTCTTTTCACAGCAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATAGAAACCATGACTAAGACAGTCATGGATTCTTTTCACAGCAAT  686

seq1  AAAACCCTAAGATAGTACATTTTTCTTAAATTTGTCTGTTATTAAGGAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCTAAGATAGTACATTTTTCTTAAATTTGTCTGTTATTAAGGAAA  736

seq1  CAGGATGTATAGGCCAAAGCTGATTATGAAGGGGACAGACCCACCCTCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGTATAGGCCAAAGCTGATTATGAAGGGGACAGACCCACCCTCAA  786

seq1  TGACTTCTAAGCTTGATCATTATTTGATAAACTAGCTAACATTTCCAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCTAAGCTTGATCATTATTTGATAAACTAGCTAACATTTCCAGTG  836

seq1  AGGGTTTGAATGTCCTCTGGTATAACAACAAGTTATCAATTCTCCCCATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTGAATGTCCTCTGGTATAACAACAAGTTATCAATTCTCCCCATG  886

seq1  AAATTTAAATGTCTTGTGATACACTGGCAAAGTTGATACTTTATAGGGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAAATGTCTTGTGATACACTGGCAAAGTTGATACTTTATAGGGCC  936

seq1  TCCTATCAAGATTATAGATTAGACCAAATTGGTAATCAAGAGGATATATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATCAAGATTATAGATTAGACCAAATTGGTAATCAAGAGGATATATC  986

seq1  ATACCTGTTCTGGGGAGATTTTTTGAGAGTTGCATCCTCACGTATGTTTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGTTCTGGGGAGATTTTTTGAGAGTTGCATCCTCACGTATGTTTG  1036

seq1  CTTATTTATCTTGCATATTTAAAAATGTTTCTAATTGAAATAAAATTATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTATCTTGCATATTTAAAAATGTTTCTAATTGAAATAAAATTATA  1086

seq1  TCACTTCCTCCTTCTACCTCCAGCCTCTCCACAGTCCTCTCTTGAATTC  1148
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCCTCCTTCTACCTCCAGCCTCTCCACAGTCCTCTCTTGAATTC  1135

seq1: chr11_12422452_12423273
seq2: B6Ng01-026D01.g_68_893

seq1  GAATTCCAAGCCCATGGTCAGCTCAAGGACTTTCTAGGACGTTGGAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCCCATGGTCAGCTCAAGGACTTTCTAGGACGTTGGAACAC  50

seq1  TGGTGAAGGCTTAGCTATGTCAGAATTCAATCTTAAAAGGCACTTATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAGGCTTAGCTATGTCAGAATTCAATCTTAAAAGGCACTTATAAT  100

seq1  AAGATAATATTAAAAGAGAGCACGTGGATACATACACCAGACTAATGCGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATATTAAAAGAGAGCACGTGGATACATACACCAGACTAATGCGA  150

seq1  GAATAGGGTTTGAGTAAAGAGAATGCCAGACTCCAGGAGGTGAGTTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGGTTTGAGTAAAGAGAATGCCAGACTCCAGGAGGTGAGTTTCCT  200

seq1  TGAAACTCTCTGCCTCGTGAGTGGCTTCCAGGCCTCTTGGCCTGTCAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTCTCTGCCTCGTGAGTGGCTTCCAGGCCTCTTGGCCTGTCAAGC  250

seq1  TGACTCTACTGGAGTGGGTGGCAATACTTACTCTGTGTGGTAGTTTGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTACTGGAGTGGGTGGCAATACTTACTCTGTGTGGTAGTTTGAAT  300

seq1  ATACTTGCCCCAGGGAGTGGCGCTATTAGGAGGTATGGCCTTGGTGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGCCCCAGGGAGTGGCGCTATTAGGAGGTATGGCCTTGGTGGAGG  350

seq1  AAATGTGTCACTGTGGGCATGGTCCTTAGGAACTTCTTCCTAGCTGCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTCACTGTGGGCATGGTCCTTAGGAACTTCTTCCTAGCTGCCTA  400

seq1  GCTGTCTTCCCCTCATGACCTTCAGATGAAGATGTAGAACTCTCAGCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTTCCCCTCATGACCTTCAGATGAAGATGTAGAACTCTCAGCTCC  450

seq1  TCCTGCACCATGCCTGCCTAGACACTAGACCAGTTTTCCTACCTATGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCACCATGCCTGCCTAGACACTAGACCAGTTTTCCTACCTATGGGA  500

seq1  AACTGTGGAGACCCTCTGCTCCAAGATGTTACATTCTCTATCACACTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGGAGACCCTCTGCTCCAAGATGTTACATTCTCTATCACACTCTG  550

seq1  AATGTTTTTCTCAGAGAATTTGTTTCCTCTAATCACCTTTTTCGAGAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTTCTCAGAGAATTTGTTTCCTCTAATCACCTTTTTCGAGAGAT  600

seq1  ATCTG-TTGTTTTTAGTTGGATTTTCTAATTCTTTGTCCTTATCTTATTT  649
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTTGTTTTTAGTTGGATTTTCTAATTCTTTGTCCTTATCTTATTT  650

seq1  CCTCTTGCATCATCAGTGCGTGATGTATCCTTTATGGATTATTTTTTTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGCATCATCAGTGCGTGATGTATCCTTTATGGATTATTTTTTTTA  700

seq1  ATTAGGTA-TTTTCCTCGTTTACA-TTTTCAATGCTAT-CCCAAAGGTCC  746
      |||||||| ||||||||||||||| ||||||||||||| |||||||||||
seq2  ATTAGGTATTTTTCCTCGTTTACATTTTTCAATGCTATCCCCAAAGGTCC  750

seq1  CCCATACCCACCCCTCCAATCCCCTACCCCCCCACTCCCCCTTTTTGGCC  796
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCCATACCCACCCCTCCAATCCCCTACCCCCCCACTCCCCCTTTTGGGCC  800

seq1  CTGGCGTTCCCCTGTACTGGGGCATA  822
      | ||  ||||||||||| ||||||||
seq2  CGGGGTTTCCCCTGTACGGGGGCATA  826