BAC Information

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BAC

Clone NameB6Ng01-026F10
Chromosome11 (Build37)
Map Location 57,542,199 - 57,761,198
singlet/doubletdoublet
Overlap geneGalnt10, Sap30l, Hand1
Upstream geneGria1, LOC667878, 1810073G14Rik, Mfap3
Downstream geneLOC624605, Larp1, LOC676527, LOC667947, Cnot8, Gemin5, Mrpl22, Irgb10, Igtp, LOC263305, LOC100041816, EG668249, 4930438A08Rik, Zfp692, Zfp672, 1700047K16Rik, Sh3bp5l, 2210415F13Rik, LOC624814, 1810065E05Rik, OTTMUSG00000005737, 4930504O13Rik, Olfr30, Olfr333-ps1, Olfr332, Olfr331, Olfr330, Olfr329, Olfr328, Olfr327-ps1, Olfr325, Olfr324, 2210407C18Rik, Olfr323, Trim58, Olfr216, OTTMUSG00000005755, Olfr320, LOC668058, Olfr319, Olfr318, Olfr317, Olfr316, Olfr315, Olfr314, 3100002J23Rik, Olfr313, Olfr312, GA_x5J8B7W3UM0-1747565-1747342, Olfr311, 2810021J22Rik, Zfp39, Butr1, Rnf187, LOC676691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026F10.bB6Ng01-026F10.g
ACCDH857411DH857412
length1,114383
definitionDH857411|Mus musculus domesticus DNA, BAC clone: B6Ng01-026F10, 5' end.DH857412|Mus musculus domesticus DNA, BAC clone: B6Ng01-026F10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,542,199 - 57,543,326)(57,760,810 - 57,761,198)
sequence
gaattctttagccctctggaccagtcttgaaaatcatcataaattatgaa
ttggaacgatagaagtgttttcaagtaactagacgcaatgccaagttcaa
gggtgaagatgtacagacagacactcaactgggaacactgatagccagcc
aaatatcagtacaagtgaaaagtagcggggcagctgacctgtgttaatga
caactgtcactggccagaacctcctggagcagatacagatgtggtcttag
ctggacactgcaactatgttctgtttataaagttaggtagagacatagac
aatatagaaagactcagactctagaaatagagatttactttgttttatgc
ctatgactgtttcgtttgcatgtatgtatatacaccctgtgtatatgcgg
ctgatatggtgtcctcagaatgcagaagagtacatcagaccccttggaac
tgaagctacagatggttaggagctgtcaagtgggttctgggaaccggagt
tgaatcctccgcaagagcagctagggcccttaaccagtgagccatctctc
tagctcccaaactccagacctaacactagctgtatctgagatgaaatacg
cgtagactaatgatggattagctactgcagggaaaaatgttagccaactt
gaaggcatatcaaaacaaactgcccaaaataaaacataaaggttttgaaa
agtgaaatgtctagaaagtctgggacaattacaatccatctaaaatgcac
gttaattaaaatctgtggcaaagaaaaggaagatagcagcttgaacttct
ccaaattgggaggcgtctgtaaagctacattcagggacccagaaaggagt
ctggggagatgtctcagggggtaaagcacatgaggacctgagttcagatt
caagagctaaagcaagacctggtggaatgtgtctgcacctcagcactccc
acagcagatggagacagaggagaggacaagagagtctctggaagctttgt
gagtcagttagtagtttgggtccgatagcaaccatagaccccatctcaag
caaggagaaggtaagggtgaccctaaggggcatggtgcatggcacaattg
ccccccccacacac
agagatcatcagctgagtagtcatacagtccctgggctgaccagtgtggt
ttgagcgtggactgtccttcagggggtcatgtatctggacactgagtctg
tccccagctggtgatgttgtttggaaagattgtgggacctctagccagtg
cagcctcctgagaggaagtgagtcactgtagtattatgtcttttgaccag
agtgtcctgttttctggacagagaagacctaagaagccattttgcaagct
cctctcatcacggtggagggctgagccctctgagatcaccagccaaaaga
aaaccttccttctttaaaattaaaaaaaaaaaaaaaaaagccgggcgtgg
tggcgcacgcctttaatcccagcactcgggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_57542199_57543326
seq2: B6Ng01-026F10.b_45_1158

seq1  GAATTCTTTAGCCCTCTGGACCAGTCTTGAAAATCATCATAAATTATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGCCCTCTGGACCAGTCTTGAAAATCATCATAAATTATGAA  50

seq1  TTGGAACGATAGAAGTGTTTTCAAGTAACTAGACGCAATGCCAAGTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACGATAGAAGTGTTTTCAAGTAACTAGACGCAATGCCAAGTTCAA  100

seq1  GGGTGAAGATGTACAGACAGACACTCAACTGGGAACACTGATAGCCAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAAGATGTACAGACAGACACTCAACTGGGAACACTGATAGCCAGCC  150

seq1  AAATATCAGTACAAGTGAAAAGTAGCGGGGCAGCTGACCTGTGTTAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAGTACAAGTGAAAAGTAGCGGGGCAGCTGACCTGTGTTAATGA  200

seq1  CAACTGTCACTGGCCAGAACCTCCTGGAGCAGATACAGATGTGGTCTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTCACTGGCCAGAACCTCCTGGAGCAGATACAGATGTGGTCTTAG  250

seq1  CTGGACACTGCAACTATGTTCTGTTTATAAAGTTAGGTAGAGACATAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACACTGCAACTATGTTCTGTTTATAAAGTTAGGTAGAGACATAGAC  300

seq1  AATATAGAAAGACTCAGACTCTAGAAATAGAGATTTACTTTGTTTTATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGAAAGACTCAGACTCTAGAAATAGAGATTTACTTTGTTTTATGC  350

seq1  CTATGACTGTTTCGTTTGCATGTATGTATATACACCCTGTGTATATGCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGACTGTTTCGTTTGCATGTATGTATATACACCCTGTGTATATGCGG  400

seq1  CTGATATGGTGTCCTCAGAATGCAGAAGAGTACATCAGACCCCTTGGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATGGTGTCCTCAGAATGCAGAAGAGTACATCAGACCCCTTGGAAC  450

seq1  TGAAGCTACAGATGGTTAGGAGCTGTCAAGTGGGTTCTGGGAACCGGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTACAGATGGTTAGGAGCTGTCAAGTGGGTTCTGGGAACCGGAGT  500

seq1  TGAATCCTCCGCAAGAGCAGCTAGGGCCCTTAACCAGTGAGCCATCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCTCCGCAAGAGCAGCTAGGGCCCTTAACCAGTGAGCCATCTCTC  550

seq1  TAGCTCCCAAACTCCAGACCTAACACTAGCTGTATCTGAGATGAAATACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCCCAAACTCCAGACCTAACACTAGCTGTATCTGAGATGAAATACG  600

seq1  CGTAGACTAATGATGGATTAGCTACTGCAGGGAAAAATGTTAGCCAACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGACTAATGATGGATTAGCTACTGCAGGGAAAAATGTTAGCCAACTT  650

seq1  GAAGGCATATCAAAACAAACTGCCCAAAATAAAACATAAAGGTTTTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCATATCAAAACAAACTGCCCAAAATAAAACATAAAGGTTTTGAAA  700

seq1  AGTGAAATGTCTAGAAAGTCTGGGACAATTACAATCCATCTAAAATGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAATGTCTAGAAAGTCTGGGACAATTACAATCCATCTAAAATGCAC  750

seq1  GTTAATTAAAATCTGTGGCAAAGAAAAGGAAGATAGCAGCTTGAACTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTAAAATCTGTGGCAAAGAAAAGGAAGATAGCAGCTTGAACTTCT  800

seq1  CCAAATTGGGAGGCGTCTGTAAAGCTACATTCAGGGGACCCAGAAAGGAG  850
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCAAATTGGGAGGCGTCTGTAAAGCTACATTCA-GGGACCCAGAAAGGAG  849

seq1  TCTGGGGAGATGTCTCAGGGGGTAAAGCACATGAGGACCTGAGTTCAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGAGATGTCTCAGGGGGTAAAGCACATGAGGACCTGAGTTCAGAT  899

seq1  TCCAAGAGCTAAAGCAAGACCTGGTGGAATGTGTCTGCAACCTCAGCACT  950
      | |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  T-CAAGAGCTAAAGCAAGACCTGGTGGAATGTGTCTGC-ACCTCAGCACT  947

seq1  CCCACAGCAAGATGGAGACAGAGGAGAGGACAAGAGAGTCTCTGGAAGCT  1000
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGC-AGATGGAGACAGAGGAGAGGACAAGAGAGTCTCTGGAAGCT  996

seq1  TTGTGAGTCAGTTAGTTAGTTTGGGTCCGATAGCAGCAATAAGACCCCAT  1050
      ||||||||||||||| ||||||||||||||||||| | || |||||||||
seq2  TTGTGAGTCAGTTAG-TAGTTTGGGTCCGATAGCAACCAT-AGACCCCAT  1044

seq1  CTCAAGCAAGGCAGAAGGTAAGGGTGGACACCTAGGGTGCATGTGTGGCA  1100
      ||||||||||| ||||||||||||| ||| |||| || ||||| || |||
seq2  CTCAAGCAAGG-AGAAGGTAAGGGT-GAC-CCTAAGGGGCATG-GT-GCA  1089

seq1  TGGCACACATATGCCCCCCCCCACACAC  1128
      |||||||   ||  ||||||||||||||
seq2  TGGCACA---ATTGCCCCCCCCACACAC  1114

seq1: chr11_57760810_57761198
seq2: B6Ng01-026F10.g_68_456 (reverse)

seq1  CCTCCCGAGTGCTGGGATTAAAGGCGTGCGCCACCACGCCCGGCTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCGAGTGCTGGGATTAAAGGCGTGCGCCACCACGCCCGGCTTTTTT  50

seq1  TTTTTTTTTTTTAATTTTAAAGAAGGAAGGTTTTCTTTTGGCTGGTGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTAATTTTAAAGAAGGAAGGTTTTCTTTTGGCTGGTGATC  100

seq1  TCAGAGGGCTCAGCCCTCCACCGTGATGAGAGGAGCTTGCAAAATGGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGGCTCAGCCCTCCACCGTGATGAGAGGAGCTTGCAAAATGGCTT  150

seq1  CTTAGGTCTTCTCTGTCCAGAAAACAGGACACTCTGGTCAAAAGACATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGTCTTCTCTGTCCAGAAAACAGGACACTCTGGTCAAAAGACATAA  200

seq1  TACTACAGTGACTCACTTCCTCTCAGGAGGCTGCACTGGCTAGAGGTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACAGTGACTCACTTCCTCTCAGGAGGCTGCACTGGCTAGAGGTCCC  250

seq1  ACAATCTTTCCAAACAACATCACCAGCTGGGGACAGACTCAGTGTCCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTTTCCAAACAACATCACCAGCTGGGGACAGACTCAGTGTCCAGA  300

seq1  TACATGACCCCCTGAAGGACAGTCCACGCTCAAACCACACTGGTCAGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGACCCCCTGAAGGACAGTCCACGCTCAAACCACACTGGTCAGCCC  350

seq1  AGGGACTGTATGACTACTCAGCTGATGATCTCTGAATTC  389
      |||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTGTATGACTACTCAGCTGATGATCTCTGAATTC  389