BAC Information

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BAC

Clone NameB6Ng01-026K19
Chromosome11 (Build37)
Map Location 70,695,219 - 70,865,678
singlet/doubletdoublet
Overlap geneRabep1, Nup88, Rpain, C1qbp, Dhx33, Derl2, Mis12, 6330403K07Rik
Upstream geneCentb1, 2810408A11Rik, 0610025P10Rik, Gps2, Eif5a, Ybx2, Slc2a4, LOC668442, Cldn7, Rai12, Dullard, Gabarap, Phf23, Dvl2, Acadvl, Dlg4, Asgr1, Asgr2, Mgl2, Mgl1, Slc16a11, Slc16a13, Bcl6b, 0610010K14Rik, D11Bwg0434e, Alox12, Alox12e, Alox15, LOC668466, Pelp1, Arrb2, Med11, Cxcl16, Zmynd15, Tm4sf5, Vmo1, C730027E14Rik, Psmb6, Pld2, Mink1, Chrne, LOC668433, Gp1ba, Slc25a11, Rnf167, Pfn1, Eno3, Spag7, Camta2, AI842396, Kif1c, LOC668488, Zfp3, A430084P05Rik, LOC668461
Downstream geneLOC382536, Nlrp1a, Nlrp1b, Nlrp1c, LOC100043249, 9230020A06Rik, Wscd1, Aipl1, 6720460F02Rik, Pitpnm3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026K19.bB6Ng01-026K19.g
ACCDH857647DH857648
length249989
definitionDH857647|Mus musculus domesticus DNA, BAC clone: B6Ng01-026K19, 5' end.DH857648|Mus musculus domesticus DNA, BAC clone: B6Ng01-026K19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,695,219 - 70,695,467)(70,864,691 - 70,865,678)
sequence
cagggcatccagagcttatataatagaggagactggtttcacaaaacaaa
acaaaagataaaaaccaaagcactcaaacttcttagttgataaaggaaac
ataatttgtaagactgtatacttattcatgattaaaaacactaaactaga
aacagaaaggaaatttgccaacttgacaaaggacatttacaaaatgggta
tgcatcagcttgtctctcatgggggtgtgtgtgtgtgtgtgtgtgtgtg
gaattcatccctccacaccctggatcctccaataaatctctttaaaataa
gtctgtgatgtgattctctcattagaagaagacaagaagaagcaaagagg
aacagggctgaggctcctgagctcctgagctcagctggggagacacaccc
tgggagctgcaatccctctgctgaggatgcttcctctcagagctgtgtgg
ttcctgagctcccatgtctcaggaagccctgggcagacagagagccttaa
aggagccttgagtggaccttgtgatgctgaaatgaaataagctccatgcc
cttgataggcacgcaaaccaggaaagcttccctcatgtgtgcccttctct
acttccatgcttccagcttcttctcccttctagttccccagcatgagcct
agaggaacagagcccccctgctatgtactcagggaacaacggaaggctct
agacccctgtgtccagagccctcctggtcttccatttggcagagagggtt
caggaaacctatggctcatgactttccccaccaggaaaacctaaacctaa
actctcaagcctaaaggaatagacagagtaggacataacaacgaagagcc
tgaatttgaactcaccgattgtagaaacggcccagcccatgactgtctcc
cacttgctgacaagattgtccagtgctggcctctgccacaggtctgcttt
tcaggacatatctcagttacttttcaaatcttagctgcctccttcccttc
ctagagatagaaacaagcttcagcctcaagggctcctctctctccacagg
gtgggtagcccaaaggattagcaatggtgacattgcacagctctcactca
agtgtaggattcttctcctcccaccttgtccttgcttcatggcagcctta
gagacgtgatagtaacccttgtcatggacatggaaggcccagggaagatg
ccatttcctaatcaattctgggacttgaagcctgtggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_70695219_70695467
seq2: B6Ng01-026K19.b_51_299

seq1  CAGGGCATCCAGAGCTTATATAATAGAGGAGACTGGTTTCACAAAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCATCCAGAGCTTATATAATAGAGGAGACTGGTTTCACAAAACAAA  50

seq1  ACAAAAGATAAAAACCAAAGCACTCAAACTTCTTAGTTGATAAAGGAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGATAAAAACCAAAGCACTCAAACTTCTTAGTTGATAAAGGAAAC  100

seq1  ATAATTTGTAAGACTGTATACTTATTCATGATTAAAAACACTAAACTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTGTAAGACTGTATACTTATTCATGATTAAAAACACTAAACTAGA  150

seq1  AACAGAAAGGAAATTTGCCAACTTGACAAAGGACATTTACAAAATGGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAGGAAATTTGCCAACTTGACAAAGGACATTTACAAAATGGGTA  200

seq1  TGCATCAGCTTGTCTCTCATGGGGGTGTGTGTGTGTGTGTGTGTGTGTG  249
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCAGCTTGTCTCTCATGGGGGTGTGTGTGTGTGTGTGTGTGTGTG  249

seq1: chr11_70864691_70865678
seq2: B6Ng01-026K19.g_70_1058 (reverse)

seq1  TCCCACAGGCTTCAAGTCCCAGAATTGATTTAGGAAATGGCCATCTTCCC  50
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  TCCCACAGGCTTCAAGTCCCAGAATTGA-TTAGGAAATGG-CATCTTCCC  48

seq1  TGGGCC-TCCATGTCCATGACAAGGGTTACTATCACGTCCTCTAAGGCTG  99
      |||||| ||||||||||||||||||||||||||||||| |||||||||||
seq2  TGGGCCTTCCATGTCCATGACAAGGGTTACTATCACGT-CTCTAAGGCTG  97

seq1  CCATGAAGCAAGGACAAGGTGGGAGGAGAAGAATCCTACACTTGAGTGAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAAGCAAGGACAAGGTGGGAGGAGAAGAATCCTACACTTGAGTGAG  147

seq1  -GCTGTGCAATGTCACCATTGCTAATCCTTTGGGCTACCCACCCTGTGGA  198
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGCAATGTCACCATTGCTAATCCTTTGGGCTACCCACCCTGTGGA  197

seq1  GGGAGAGGAGCCCTTGAGGCTGAAGCTTGTTTCTATCTCTAGG-AGGGAA  247
      | ||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAGAGAGGAGCCCTTGAGGCTGAAGCTTGTTTCTATCTCTAGGAAGGGAA  247

seq1  GGAGGCAGCTAAGATTTGAAAAGTAACTGAGATATGTCCTG-AAAGCAGA  296
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGAGGCAGCTAAGATTTGAAAAGTAACTGAGATATGTCCTGAAAAGCAGA  297

seq1  CCTGTGGCAGAGGCCAGCACTGGACAATCTTGTCAGCAAGTGGGAGACAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGCAGAGGCCAGCACTGGACAATCTTGTCAGCAAGTGGGAGACAG  347

seq1  TCATGGGCTGGGCCGTTTCTACAATCGGTGAGTTCAAATTCAGGCTCTTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGCTGGGCCGTTTCTACAATCGGTGAGTTCAAATTCAGGCTCTTC  397

seq1  GTTGTTATGTCCTACTCTGTCTATTCCTTTAGGCTTGAGAGTTTAGGTTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTATGTCCTACTCTGTCTATTCCTTTAGGCTTGAGAGTTTAGGTTT  447

seq1  AGGTTTTCCTGGTGGGGAAAGTCATGAGCCATAGGTTTCCTGAACCCTCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTCCTGGTGGGGAAAGTCATGAGCCATAGGTTTCCTGAACCCTCT  497

seq1  CTGCCAAATGGAAGACCAGGAGGGCTCTGGACACAGGGGTCTAGAGCCTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAAATGGAAGACCAGGAGGGCTCTGGACACAGGGGTCTAGAGCCTT  547

seq1  CCGTTGTTCCCTGAGTACATAGCAGGGGGGCTCTGTTCCTCTAGGCTCAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTGTTCCCTGAGTACATAGCAGGGGGGCTCTGTTCCTCTAGGCTCAT  597

seq1  GCTGGGGAACTAGAAGGGAGAAGAAGCTGGAAGCATGGAAGTAGAGAAGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGAACTAGAAGGGAGAAGAAGCTGGAAGCATGGAAGTAGAGAAGG  647

seq1  GCACACATGAGGGAAGCTTTCCTGGTTTGCGTGCCTATCAAGGGCATGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACATGAGGGAAGCTTTCCTGGTTTGCGTGCCTATCAAGGGCATGGA  697

seq1  GCTTATTTCATTTCAGCATCACAAGGTCCACTCAAGGCTCCTTTAAGGCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATTTCATTTCAGCATCACAAGGTCCACTCAAGGCTCCTTTAAGGCT  747

seq1  CTCTGTCTGCCCAGGGCTTCCTGAGACATGGGAGCTCAGGAACCACACAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTGCCCAGGGCTTCCTGAGACATGGGAGCTCAGGAACCACACAG  797

seq1  CTCTGAGAGGAAGCATCCTCAGCAGAGGGATTGCAGCTCCCAGGGTGTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGAGGAAGCATCCTCAGCAGAGGGATTGCAGCTCCCAGGGTGTGT  847

seq1  CTCCCCAGCTGAGCTCAGGAGCTCAGGAGCCTCAGCCCTGTTCCTCTTTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAGCTGAGCTCAGGAGCTCAGGAGCCTCAGCCCTGTTCCTCTTTG  897

seq1  CTTCTTCTTGTCTTCTTCTAATGAGAGAATCACATCACAGACTTATTTTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTGTCTTCTTCTAATGAGAGAATCACATCACAGACTTATTTTA  947

seq1  AAGAGATTTATTGGAGGATCCAGGGTGTGGAGGGATGAATTC  988
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATTTATTGGAGGATCCAGGGTGTGGAGGGATGAATTC  989