BAC Information

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BAC

Clone NameB6Ng01-026P07
Chromosome11 (Build37)
Map Location 25,996,876 - 25,998,042
singlet/doubletsinglet
Overlap gene5730522E02Rik
Upstream geneLOC100042328
Downstream geneLOC100042345, Fancl, Vrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026P07.bB6Ng01-026P07.g
ACCDH857837DH857838
length1,145358
definitionDH857837|Mus musculus domesticus DNA, BAC clone: B6Ng01-026P07, 5' end.DH857838|Mus musculus domesticus DNA, BAC clone: B6Ng01-026P07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgaactcctacctgtctaacaccctagagaactgctattctat
gcctttcagacttgccctcagcattcaaggcctgaccagtgaatacacag
aacagtggactaccggtgctgaccataaacaactggactctgactactac
cttgggatcatgacatgcattgatttccattgatagaaagcattcagttc
tggcctcccttgctccctgtgaagacagcagagtgcagactgccattgca
ttgtctaagcagggcagacactcagcaggctaatctgcctagtctgattc
acacagctgatacactttcacactggtactggaacccgaagaccccgagt
catgtggacagaggaactgaggactgagctccagagagcacgaagctcag
agactttctgaaagatatgggacagagataaaaccctaaaccagaaaggg
agttagcaaatatcaaaggccagctccctcattttgaagatatggtctag
tttgaatgaatgactgacctaaaggtacccatcaaacacacataaaggaa
actccagtccagtgtggtctcttgttcccatgacctccttctatttagtg
tggtttaaataaaataaaataaaacaaaacaaaacaaaaacttcaaaggc
actccagaccaaaagccagagagacaggttagaattcatttaagctgacc
aagtaaattggaggtttgatcaaacacagaatgaaactcagcaccacgtg
tatgttaactagagatggccactaacagagaaagaccagagggctgggag
ggtggagggcaccacatgcagcagcaggtctccatttgcttccctctgtt
ctgctatggaaagtctggaagtccaacaagaggtagtgtcttcaaaactc
acgtggacactacctgtcctatctttctggtaaagggaggctggataaaa
taagtgttgatggtacacaaaggtgtccttaccctggaacctgcacaaag
gtcaggttgcatctgtaaaccgtactgggagaactacacttctaaggcat
cagaaactcatcaaataccacaccactactccacatggccaaacccagta
gcagaagcctcctgaatcctctacttcttttttcctgtggagctc

cacaggaaggccaacagatttaactaacctggacccgtgggggtctcaga
gactgaatcatcaaccaaagaacctacacaggatggacctaggccttccc
acaaatatgtagcagatgtgcagctcagtcttcatgtgggtcctgaacaa
ctcaactgtattggaactaactcaaaagctgttgcctatctctgggatat
gcttttctagctgggctgccttgtctagcctcagtgggagaggatgcccc
tagcctcagaatgacttgatgtgctcgggttggggggatacccagagggc
ccctaccttctcaaaggagtagagaaggggggtgggaaaagatttgtggg
aaggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_25996876_25998042
seq2: B6Ng01-026P07.b_43_1187

seq1  GAATTCCTGAACTCCTACCTGTCTAACACCCTAGAGAACTGCTATTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAACTCCTACCTGTCTAACACCCTAGAGAACTGCTATTCTAT  50

seq1  GCCTTTCAGACTTGCCCTCAGCATTCAAGGCCTGACCAGTGAATACACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCAGACTTGCCCTCAGCATTCAAGGCCTGACCAGTGAATACACAG  100

seq1  AACAGTGGACTACCGGTGCTGACCATAAACAACTGGACTCTGACTACTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGGACTACCGGTGCTGACCATAAACAACTGGACTCTGACTACTAC  150

seq1  CTTGGGATCATGACATGCATTGATTTCCATTGATAGAAAGCATTCAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGATCATGACATGCATTGATTTCCATTGATAGAAAGCATTCAGTTC  200

seq1  TGGCCTCCCTTGCTCCCTGTGAAGACAGCAGAGTGCAGACTGCCATTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCCCTTGCTCCCTGTGAAGACAGCAGAGTGCAGACTGCCATTGCA  250

seq1  TTGTCTAAGCAGGGCAGACACTCAGCAGGCTAATCTGCCTAGTCTGATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTAAGCAGGGCAGACACTCAGCAGGCTAATCTGCCTAGTCTGATTC  300

seq1  ACACAGCTGATACACTTTCACACTGGTACTGGAACCCGAAGACCCCGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCTGATACACTTTCACACTGGTACTGGAACCCGAAGACCCCGAGT  350

seq1  CATGTGGACAGAGGAACTGAGGACTGAGCTCCAGAGAGCACGAAGCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGACAGAGGAACTGAGGACTGAGCTCCAGAGAGCACGAAGCTCAG  400

seq1  AGACTTTCTGAAAGATATGGGACAGAGATAAAACCCTAAACCAGAAAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTCTGAAAGATATGGGACAGAGATAAAACCCTAAACCAGAAAGGG  450

seq1  AGTTAGCAAATATCAAAGGCCAGCTCCCTCATTTTGAAGATATGGTCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGCAAATATCAAAGGCCAGCTCCCTCATTTTGAAGATATGGTCTAG  500

seq1  TTTGAATGAATGACTGACCTAAAGGTACCCATCAAACACACATAAAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATGAATGACTGACCTAAAGGTACCCATCAAACACACATAAAGGAA  550

seq1  ACTCCAGTCCAGTGTGGTCTCTTGTTCCCATGACCTCCTTCTATTTAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGTCCAGTGTGGTCTCTTGTTCCCATGACCTCCTTCTATTTAGTG  600

seq1  TGGTTTAAATAAAATAAAATAAAACAAAACAAAACAAAAACTTCAAAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAAATAAAATAAAATAAAACAAAACAAAACAAAAACTTCAAAGGC  650

seq1  ACTCCAGACCAAAAGCCAGAGAGACAGGTTAGAATTCATTTAAGCTGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGACCAAAAGCCAGAGAGACAGGTTAGAATTCATTTAAGCTGACC  700

seq1  AAGTAAATTGGAGGTTTGATCAAACACAGAATGAAACTCAGCACCACGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATTGGAGGTTTGATCAAACACAGAATGAAACTCAGCACCACGTG  750

seq1  TATGTTAACTAGAGATGGCCACTAACAGAGAAAGACCAGAGGGCTGGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAACTAGAGATGGCCACTAACAGAGAAAGACCAGAGGGCTGGGAG  800

seq1  GGTGGAGGGCACCACATGCAGCAGCAGGTCTCCATTTGCTTCCCTCTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGGGCACCACATGCAGCAGCAGGTCTCCATTTGCTTCCCTCTGTT  850

seq1  CTGCTATGGAAAGTCTGGAAGTCCAACAAGAGGTAGGTGTCTTCAAAACT  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTGCTATGGAAAGTCTGGAAGTCCAACAAGAGGTA-GTGTCTTCAAAACT  899

seq1  CACGTGGACACTACCTGTCCTATCTTTCTGGTAAAGGGGAGGCTGGATAA  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CACGTGGACACTACCTGTCCTATCTTTCTGGTAAA-GGGAGGCTGGATAA  948

seq1  AATAAGTGTTGATGGTACACAAAGGTGTCCTTACCCTGGAACCTGCACAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTGTTGATGGTACACAAAGGTGTCCTTACCCTGGAACCTGCACAA  998

seq1  AGGTCAGGTTGCATCTGTAAACCGTACCTGGGAGGAAAACTACACTTCTT  1050
      |||||||||||||||||||||||||| |||||||   ||||||||||| |
seq2  AGGTCAGGTTGCATCTGTAAACCGTA-CTGGGAG---AACTACACTTC-T  1043

seq1  AAGGCATTCAAGATACTTCATCAAAATACCACACCAACTAACTCCACATA  1100
      |||||||   ||| || ||||| |||||||||||| ||| ||||||||| 
seq2  AAGGCAT--CAGAAAC-TCATC-AAATACCACACC-ACT-ACTCCACATG  1087

seq1  GCACAAACCCAGTAGCAGGAAGGCCTCCTGGATCCTCCTAACTTCTTTTT  1150
      || |||||||||||||||  | |||||||| ||||||   ||||||||  
seq2  GC-CAAACCCAGTAGCAG--AAGCCTCCTGAATCCTC--TACTTCTTT--  1130

seq1  CTTCCCTGTGGAAGCTC  1167
       || ||||||| |||||
seq2  -TTTCCTGTGG-AGCTC  1145


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