BAC Information

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BAC

Clone NameB6Ng01-027I15
Chromosome11 (Build37)
Map Location 12,036,088 - 12,167,342
singlet/doubletdoublet
Overlap geneCobl
Upstream geneVwc2, Zpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027I15.bB6Ng01-027I15.g
ACCDH858255DH858256
length722857
definitionDH858255|Mus musculus domesticus DNA, BAC clone: B6Ng01-027I15, 5' end.DH858256|Mus musculus domesticus DNA, BAC clone: B6Ng01-027I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,036,088 - 12,036,807)(12,166,484 - 12,167,342)
sequence
gaattcaccgatgttgttcgtggaagagaatgctactataatgacctata
gaactgacaatgtctatgaaagttcagcacacatgtacgtcaggactgca
gatttcacattctatacctttagaattacattcatacatcaccatagtgt
ctacttctttcacagacaagagtatatgttgtgggatatgtaatcaatca
atcaatcaatcaatcaatcaatcaatcaatatatagtcattatgtatatt
gtggaatatatgttattccatatgactaaattagaatacttaatgccagg
tataggatatatccccacatcaggtgtcatcagtgaaacttctttgtgtg
gtggatagtagttaacacagatagtcacaggacaaagaataaatgtcaat
ggagttctcaggcataatgggacatttatatcacctttctaaggcctaga
gaccagcatagaagatgtggtagaaagatacattagataatgacttctgc
ccgtgaccactgaactaatgaacatacaacagttttgtttgtctgcaaaa
gacctctaattgatcagcccatgtctaactgacatgcctctgaggagtgg
tagataattgatggtttctggaggagaatgtcagtttttcttttttttgt
ttgtttgttttgtttaattttttattaggtatttcttcatttacatttcc
aatgctatcccaaaagtcccca
gaattcacttatgcatacacacaaggctccttcagagttaaaatgtttta
gtgaatgctattggtttgacagagggtcttccttgtttggatagccctga
atcacacatttcagagtcaaaaggatgtcgcccatgttaggcagcatgac
actctgagtagattttgttaacctgtctttgtatgtcccctccagtgagt
ctgcctctggggcctggcagccactgcagcatgggtggagtctctcaggt
gccagcggagagtgaggagacagcatctgaggacacaaccgaggactcgg
gggtcatgagctctccctcagatgccatctccctggactcacaacaagac
agcatgagatccaaggacaaatggtccacagaccaggaagacggcagtga
ccaggacctggctggaactccagaactgggtccccaaaagagcccatcat
gggggaaaagtggttcaggaagctcaattctaaggtgagtcatggaacca
ggatctagttcctctctgactggaggacaagttttcagtagctgtatcct
ctctttgaagcacttttcacagcactggtccctaccactttctcctatct
gacctttgttcacctagtcagctgtgtaagaaaagaaaagtatctctgat
ctctaagcatgacagagacactaacttatcccctcaagagatgacctcat
gtctctcctttcgagaaataaaaaactatagttggagaaggttaaatatt
tgcagaaattacctgtctcattgtgtttccaaatatataatgtgaacatt
gccaggtgcatgtagtgtaaaaggggttgaaacctcatgtcctgtgtctg
gcagggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12036088_12036807
seq2: B6Ng01-027I15.b_40_760

seq1  GAATTCACCGATGTTGTTCGTGGAAGAGAATGCTACTATAATGACCTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCGATGTTGTTCGTGGAAGAGAATGCTACTATAATGACCTATA  50

seq1  GAACTGACAATGTCTATGAAAGTTCAGCACACATGTACGTCAGGACTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGACAATGTCTATGAAAGTTCAGCACACATGTACGTCAGGACTGCA  100

seq1  GATTTCACATTCTATACCTTTAGAATTACATTCATACATCACCATAGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCACATTCTATACCTTTAGAATTACATTCATACATCACCATAGTGT  150

seq1  CTACTTCTTTCACAGACAAGAGTATATGTTGTGGGATATGTAATCAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCTTTCACAGACAAGAGTATATGTTGTGGGATATGTAATCAATCA  200

seq1  ATCAATCAATCAATCAATCAATCAATCAATATATAGTCATTATGTATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCAATCAATCAATCAATCAATCAATATATAGTCATTATGTATATT  250

seq1  GTGGAATATATGTTATTCCATATGACTAAATTAGAATACTTAATGCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATATATGTTATTCCATATGACTAAATTAGAATACTTAATGCCAGG  300

seq1  TATAGGATATATCCCCACATCAGGTGTCATCAGTGAAACTTCTTTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGATATATCCCCACATCAGGTGTCATCAGTGAAACTTCTTTGTGTG  350

seq1  GTGGATAGTAGTTAACACAGATAGTCACAGGACAAAGAATAAATGTCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATAGTAGTTAACACAGATAGTCACAGGACAAAGAATAAATGTCAAT  400

seq1  GGAGTTCTCAGGCATAATGGGACATTTATATCACCTTTCTAAGGCCTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCTCAGGCATAATGGGACATTTATATCACCTTTCTAAGGCCTAGA  450

seq1  GACCAGCATAGAAGATGTGGTAGAAAGATACATTAGATAATGACTTCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCATAGAAGATGTGGTAGAAAGATACATTAGATAATGACTTCTGC  500

seq1  CCGTGACCACTGAACTAATGAACATACAACAGTTTTGTTTGTCTGCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGACCACTGAACTAATGAACATACAACAGTTTTGTTTGTCTGCAAAA  550

seq1  GACCTCTAATTGATCAGCCCATGTCTAACTGACATGCCTCTGAGGAGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTAATTGATCAGCCCATGTCTAACTGACATGCCTCTGAGGAGTGG  600

seq1  TAGATAATTGATGGTTTCTGGAGGAGAATGTCAGTTTT--CTTTTTTTGT  648
      ||||||||||||||||||||||||||||||||||||||   |||||||||
seq2  TAGATAATTGATGGTTTCTGGAGGAGAATGTCAGTTTTTCTTTTTTTTGT  650

seq1  TTGTTTGTTTGTTTTAATTTTTTATTAGGTATTTTCCTCATTTACATTTC  698
      ||||||||||  ||||||||||||||||||| |||| |||||||||||||
seq2  TTGTTTGTTTTGTTTAATTTTTTATTAGGTA-TTTCTTCATTTACATTTC  699

seq1  CAATGCTATCCCAAAAGTCCCC  720
      ||||||||||||||||||||||
seq2  CAATGCTATCCCAAAAGTCCCC  721

seq1: chr11_12166484_12167342
seq2: B6Ng01-027I15.g_68_924 (reverse)

seq1  CCCCTGCCAGACACAGGACATGAGGTTTCAACCCCCTTTTACACTACATT  50
      ||||||||||||||||||||||||||||||| |||||||||||||||| |
seq2  CCCCTGCCAGACACAGGACATGAGGTTTCAA-CCCCTTTTACACTACA-T  48

seq1  GCACCTGGCAATGTTCAACATTATATATTTGGAAACACAATGAGACAGGT  100
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GCACCTGGCAATGTTC-ACATTATATATTTGGAAACACAATGAGACAGGT  97

seq1  AATTTCTGCAAAATATTTAACCTTCTCCAACCTATAGTTTTTTATTTCTC  150
      ||||||||| |||||||||||||||||||| |||||||||||||||||||
seq2  AATTTCTGC-AAATATTTAACCTTCTCCAA-CTATAGTTTTTTATTTCTC  145

seq1  GAAAGGAGAGACATGAGGTCATCTCTTGAGGGGATAAGTTAGTGTCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAGAGACATGAGGTCATCTCTTGAGGGGATAAGTTAGTGTCTCTG  195

seq1  TCATGCTTAGAGATCAGAGATACTTTTC-TTTCTTACACAGCTGACTAGG  249
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCATGCTTAGAGATCAGAGATACTTTTCTTTTCTTACACAGCTGACTAGG  245

seq1  TGAAC-AAGGTCAGATAGGAGAAAGTGGTAGGGACCAGTGCTGTGAAAAG  298
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAAAGGTCAGATAGGAGAAAGTGGTAGGGACCAGTGCTGTGAAAAG  295

seq1  TGCTTCAAAGAGAGGATACAGCTACTG-AAACTTGTCCTCCAGTCAGAGA  347
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGCTTCAAAGAGAGGATACAGCTACTGAAAACTTGTCCTCCAGTCAGAGA  345

seq1  GGAACTAGATCCTGGTTCCATGACTCACCTTAGAATTGAGCTTCCTGAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTAGATCCTGGTTCCATGACTCACCTTAGAATTGAGCTTCCTGAAC  395

seq1  CACTTTTCCCCCATGATGGGCTCTTTTGGGGACCCAGTTCTGGAGTTCCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTCCCCCATGATGGGCTCTTTTGGGGACCCAGTTCTGGAGTTCCA  445

seq1  GCCAGGTCCTGGTCACTGCCGTCTTCCTGGTCTGTGGACCATTTGTCCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGTCCTGGTCACTGCCGTCTTCCTGGTCTGTGGACCATTTGTCCTT  495

seq1  GGATCTCATGCTGTCTTGTTGTGAGTCCAGGGAGATGGCATCTGAGGGAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCATGCTGTCTTGTTGTGAGTCCAGGGAGATGGCATCTGAGGGAG  545

seq1  AGCTCATGACCCCCGAGTCCTCGGTTGTGTCCTCAGATGCTGTCTCCTCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATGACCCCCGAGTCCTCGGTTGTGTCCTCAGATGCTGTCTCCTCA  595

seq1  CTCTCCGCTGGCACCTGAGAGACTCCACCCATGCTGCAGTGGCTGCCAGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCGCTGGCACCTGAGAGACTCCACCCATGCTGCAGTGGCTGCCAGG  645

seq1  CCCCAGAGGCAGACTCACTGGAGGGGACATACAAAGACAGGTTAACAAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAGGCAGACTCACTGGAGGGGACATACAAAGACAGGTTAACAAAA  695

seq1  TCTACTCAGAGTGTCATGCTGCCTAACATGGGCGACATCCTTTTGACTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCAGAGTGTCATGCTGCCTAACATGGGCGACATCCTTTTGACTCT  745

seq1  GAAATGTGTGATTCAGGGCTATCCAAACAAGGAAGACCCTCTGTCAAACC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTGTGATTCAGGGCTATCCAAACAAGGAAGACCCTCTGTCAAACC  795

seq1  AATAGCATTCACTAAAACATTTTAACTCTGAAGGAGCCTTGTGTGTATGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCATTCACTAAAACATTTTAACTCTGAAGGAGCCTTGTGTGTATGC  845

seq1  ATAAGTGAATTC  859
      ||||||||||||
seq2  ATAAGTGAATTC  857