BAC Information

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BAC

Clone NameB6Ng01-027O13
Chromosome11 (Build37)
Map Location 6,460,093 - 6,460,949
singlet/doubletsinglet
Overlap geneCcm2
Upstream geneLOC100041183, Ankrd36, LOC665181, Mrps24, 2010005J08Rik, 2210015D19Rik, Dbnl, Pgam2, Polm, Aebp1, Pold2, Myl7, Gck, Ykt6, Camk2b, LOC100042156, Nudcd3, LOC100042173, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, LOC665327
Downstream geneAB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332, Adcy1, LOC100041347, Igfbp1, Igfbp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027O13.bB6Ng01-027O13.g
ACCDH858526DH858527
length855736
definitionDH858526|Mus musculus domesticus DNA, BAC clone: B6Ng01-027O13, 5' end.DH858527|Mus musculus domesticus DNA, BAC clone: B6Ng01-027O13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgaagtggctcccatgcttccttataggatggtctagcttagt
ggatttatgatgacacaaaggtacccacacagctttcactttcagtatat
agaattcagtagattacaaacatacctactgctgggttaggtggtattgt
ttgacagggctgatgtaggcaccatgagaccagttaaggcggatgcagct
acacaggggctgaggtaggttaaatgcattttgacttaatttatgatgga
tttactgggggctgaattcaccatagggccaggaacatctgcttttgtta
tatttgcttattggtctatggatatatatagtcatactaattagttaaat
agccatttctattgcaagctattctggaacattcaactaactgtaagggt
cttttatcaacaataaatgttaacttctcctttcctggatgaagaagttt
aactgtgaggaaattaaaacaacttgcttatgaacacattgttttattgc
aagttggtgacttaaattcaggtctcctggccctgggctagtataggctg
agcacttagcacaactggaaaaggacctggaaatgcacctattcatacct
tgctgctgtggccacgtgttgaaacagtatatggagcaggcttgtccttg
tcctcctgccaccaggaccacagggcccggggtcctccctgatgatgtgg
ccctgcagtgtgcctatggtcaggcttccaaagacacgtccatcagcaat
ggattgcaacactgcaaattggatggaaatggccacggcctccgctgcct
gtgggattcttctctgcgcagtgggagaatgatgttcgctagttactttg
tatct
gaattcactgacgcgggcaaaaaggccagctgggatggccccaaagtatg
gggactaagactgtaccgatccacagggaccgacccggtgacccggttct
ctttgacccgccaggtcctcaatatagggccccgcgtccccattgggcct
aatcccgtgatcactgaccagttacccccctcccgacccgtgcagatcat
gctccccaggcctcctcagcctcctcctccaggcgcagcctctatagtcc
ctgagactgccccaccttctcaacaacctgggacgggagacaggctgcta
aacctggtagatggagcctaccaagctctcaacctcaccagtcccgacaa
aacccaagagtgctggttgtgtctggtagcgggacccccctactacgaag
gggttgccgtcctaggtacttattccaaccatacctctgccccagctaac
tgctccgtggcctcccaacacaagctgaccctgtccgaagtgaccggaca
gggactctgcgtaggagcagttcccaaaacccatcaggccctgtgtaata
ccacccagaagacgagcgacgggtcctactatctggctgctcccgccggg
accatttgggcttgcaacaccgggctcactccctgcctatctaccactgt
actcgacctcaccaccgattactgtgtcctggttgagctcttggccaaag
gtgacctaccactcccctgtttatgtttatggccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_6460093_6460949
seq2: B6Ng01-027O13.b_32_886

seq1  GAATTCATGAAGTGGCTCCCATGCTTCCTTATAGGATGGTCTAGCTTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAAGTGGCTCCCATGCTTCCTTATAGGATGGTCTAGCTTAGT  50

seq1  GGATTTATGATGACACAAAGGTACCCACACAGCTTTCACTTTCAGTATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTATGATGACACAAAGGTACCCACACAGCTTTCACTTTCAGTATAT  100

seq1  AGAATTCAGTAGATTACAAACATACCTACTGCTGGGTTAGGTGGTATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCAGTAGATTACAAACATACCTACTGCTGGGTTAGGTGGTATTGT  150

seq1  TTGACAGGGCTGATGTAGGCACCATGAGACCAGTTAAGGCGGATGCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGGGCTGATGTAGGCACCATGAGACCAGTTAAGGCGGATGCAGCT  200

seq1  ACACAGGGGCTGAGGTAGGTTAAATGCATTTTGACTTAATTTATGATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGGGCTGAGGTAGGTTAAATGCATTTTGACTTAATTTATGATGGA  250

seq1  TTTACTGGGGGCTGAATTCACCATAGGGCCAGGAACATCTGCTTTTGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGGGGGCTGAATTCACCATAGGGCCAGGAACATCTGCTTTTGTTA  300

seq1  TATTTGCTTATTGGTCTATGGATATATATAGTCATACTAATTAGTTAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCTTATTGGTCTATGGATATATATAGTCATACTAATTAGTTAAAT  350

seq1  AGCCATTTCTATTGCAAGCTATTCTGGAACATTCAACTAACTGTAAGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTTCTATTGCAAGCTATTCTGGAACATTCAACTAACTGTAAGGGT  400

seq1  CTTTTATCAACAATAAATGTTAACTTCTCCTTTCCTGGATGAAGAAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATCAACAATAAATGTTAACTTCTCCTTTCCTGGATGAAGAAGTTT  450

seq1  AACTGTGAGGAAATTAAAACAACTTGCTTATGAACACATTGTTTTATTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGAGGAAATTAAAACAACTTGCTTATGAACACATTGTTTTATTGC  500

seq1  AAGTTGGTGACTTAAATTCAGGTCTCCTGGCCCTGGGCTAGTATAGGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGTGACTTAAATTCAGGTCTCCTGGCCCTGGGCTAGTATAGGCTG  550

seq1  AGCACTTAGCACAACTGGAAAAGGACCTGGAAATGCACCTATTCATACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTAGCACAACTGGAAAAGGACCTGGAAATGCACCTATTCATACCT  600

seq1  TGCTGCTGTGGCCACGTGTTGAAACAGTATATGGAGCAGGCTTGTCCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTGTGGCCACGTGTTGAAACAGTATATGGAGCAGGCTTGTCCTTG  650

seq1  TCCTCCTGCCACCAGGACCACAGGGCCCGGGGTCCTCCCTGATGATGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGCCACCAGGACCACAGGGCCCGGGGTCCTCCCTGATGATGTGG  700

seq1  CCCTGCAGTGTGCCTATGGTCAGGCTTCCAAAGACACGTCCATCAGCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAGTGTGCCTATGGTCAGGCTTCCAAAGACACGTCCATCAGCAAT  750

seq1  GGATTGCAACACTGCAGAGTTGGATGGAAATGGCCACGGCCTCCGCTGCC  800
      |||||||||||||||| | |||||||||||||||||||||||||||||||
seq2  GGATTGCAACACTGCA-AATTGGATGGAAATGGCCACGGCCTCCGCTGCC  799

seq1  TGTGGGATTCTGCTCTGCGCAGTGGGAGAATGAATGTTCGCTAGTTACTT  850
      ||||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  TGTGGGATTCTTCTCTGCGCAGTGGGAGAATG-ATGTTCGCTAGTTACTT  848

seq1  TGTATCT  857
      |||||||
seq2  TGTATCT  855