BAC Information

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BAC

Clone NameB6Ng01-028O20
Chromosome11 (Build37)
Map Location 7,120,817 - 7,286,095
singlet/doubletdoublet
Overlap genenone
Upstream geneNpc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332, Adcy1, LOC100041347, Igfbp1, Igfbp3
Downstream geneLOC665380
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028O20.bB6Ng01-028O20.g
ACCDH859269DH859270
length1,142935
definitionDH859269|Mus musculus domesticus DNA, BAC clone: B6Ng01-028O20, 5' end.DH859270|Mus musculus domesticus DNA, BAC clone: B6Ng01-028O20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,284,950 - 7,286,095)(7,120,817 - 7,121,765)
sequence
gaattctcaactccacaataacgaatgacctcattgaaaagaacctatag
gaaatttcgacacaaatcccaaagaacaattaccagtatgtcctaacaac
tcaaaggttatatatatatgatgcattccaacattacagctagatgagat
ttaaaaagaaaaagaaaacaaaaacctgattcaggagattagaatagact
acaataaaccaatactgaagaaaagccacacggaaatgatgatagaaatg
gcaaaaaatcacatgagattgaatcagaagttcagaggaaggcaacacca
ttaggactaatcatttggagaatataatttaaacatttggaacaatagtt
aggaaaaacataacttagtaatggtcaatgataatttctaaaagtactgt
aaaaggaacatgtaatatttggtggatatcatgaaaaggggaaaatttat
taagttcaggtaggcaagaaggagaataatttcatgccaaaagaataaga
aaagtttctgttaggaacagtttctgttaggaacataggtactttgttta
actcaagaagccatttttatgtgacttgaagtaatatgatggctgagttt
accattggccatctctgagaagagctaggccttagaatcaagccccaggt
aggccaccttgcagcttggatctgagtgagagctcaagacaggtcttgat
attccagtgaactaatcccaaattagtgttgatgtagtagtagtgaatca
gtctcaagctttgaaccctgatagcacaaagttgccattcaatgaaatga
tgcaaaaattggagctttgaaaagagtctcttgtgctgtcatactcttga
gagatctgacttctccagccactgtgctgatagccatccatgagaggact
tgagactctatgtgtggtcttgcctttggtgactgttgagcttccacact
gtcactgggcccacacaagtctgctgtcagtgttagatgctggacagtac
tctcaaggacttcctggggagttttgtcgtgccactgtccaccttgctaa
agctgaagaactcacgtggacgtgagtcaagcctgcaacttccagaagaa
ttcctccgttggaaccctacagtaatatttctgtccaacaac
gaattcacctccttacatgagttcaattcccagcaccatgagaacagcaa
aaagcaaactatttttattttggagttatcagatttcttctcaaactttg
gatgtgtttttgtttttattatatctaggtcctgaaattaaatacataca
aatttagtgtctttctggctcctcaaattgttggtctttctaatggagca
atatttatctttatttcttctttggctctaatatctattctcaatgatag
taaataaaaccacattgacttcttttggctagttgtatgttatatatgca
tagttcattatttcagcctacacttacacactcaatgggcctcctttgca
tggaacattgtgagattctttcaaacagttgtcttagtaattgttctatt
gctgtgaagacacaccgtgaccaaggcagctcttatttaattgcttatac
tttcagagatttagttcattgtcctcatggtggagagcatgacagcaggc
atggcaggcatggtgctggagcaggaattgagagttacatcttgatctgc
agacagagagagacagagagagagagagagagatcctgatctgcaggcag
agacagagagacagagacagagacagagaggaggagagaaggtctttggg
cagcctacttttctttacaactgtgagtcttttttttttttttttttttt
tttttggtttttcctaaattttattttttcaattttatataaaatgaaaa
atcatcacaaaataatataaaacattattatgcatttacatatgatgtcc
tgtggattgtgggtgggtttcttttgttattgtatttgagacagatctca
ttctatagcctagactatacttattttttccaatattttttattagtatt
atttcattacatttccaatgctatccaaaagtccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_7284950_7286095
seq2: B6Ng01-028O20.b_47_1188 (reverse)

seq1  GTTGTTTGGACAGAAATACTACTGTAGGGTTCCACTGGAG--AATCTTCT  48
      |||| ||||||||||||| |||||||||||||||  ||||  | ||||||
seq2  GTTG-TTGGACAGAAATATTACTGTAGGGTTCCAACGGAGGAATTCTTCT  49

seq1  GGAAGTTTGCAGGCTTGACTCACGTCCACTGTGAAGTCCTTCAGCTATAG  98
      ||||| ||||||||||||||||||||||| ||| ||| |||||||| |||
seq2  GGAAG-TTGCAGGCTTGACTCACGTCCAC-GTG-AGTTCTTCAGCTTTAG  96

seq1  CAGGTTGGGACAGTGGCACTGACAAAACT-CCCAGGAAGTCCTTGAGAGT  147
      || | | |||||||||||| ||||||||| ||||||||||||||||||||
seq2  CAAGGT-GGACAGTGGCAC-GACAAAACTCCCCAGGAAGTCCTTGAGAGT  144

seq1  ACTGTCCAGCATCTAACACTGACAAGCAGACCTGTGTGGGCCCAGTGACA  197
      ||||||||||||||||||||||| ||||||| ||||||||||||||||||
seq2  ACTGTCCAGCATCTAACACTGAC-AGCAGACTTGTGTGGGCCCAGTGACA  193

seq1  GTGTGGAAGCTCAACAGTCACCAAAGGCAAGACCACACATAGAGTCTCAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGAAGCTCAACAGTCACCAAAGGCAAGACCACACATAGAGTCTCAA  243

seq1  GTCCTCTCATGGATGGCTATCAGCACAGTGGCTGGAGAAGTCAGATCTCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTCATGGATGGCTATCAGCACAGTGGCTGGAGAAGTCAGATCTCT  293

seq1  CAAGAGTATGACAGCACAAGAGACTCTTTTCAAAGCTCCAATTTTTGCAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTATGACAGCACAAGAGACTCTTTTCAAAGCTCCAATTTTTGCAT  343

seq1  CATTTCATTGAATGGCAACTTTGTGCTATCAGGGTTCAAAGCTTGAGACT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCATTGAATGGCAACTTTGTGCTATCAGGGTTCAAAGCTTGAGACT  393

seq1  GATTCACTACTACTACATCAACACTAATTTGGGATTAGTTCACTGGAATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCACTACTACTACATCAACACTAATTTGGGATTAGTTCACTGGAATA  443

seq1  TCAAGACCTGTCTTGAGCTCTCACTCAGATCCAAGCTGCAAGGTGGCCTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACCTGTCTTGAGCTCTCACTCAGATCCAAGCTGCAAGGTGGCCTA  493

seq1  CCTGGGGCTTGATTCTAAGGCCTAGCTCTTCTCAGAGATGGCCAATGGTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGCTTGATTCTAAGGCCTAGCTCTTCTCAGAGATGGCCAATGGTA  543

seq1  AACTCAGCCATCATATTACTTCAAGTCACATAAAAATGGCTTCTTGAGTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGCCATCATATTACTTCAAGTCACATAAAAATGGCTTCTTGAGTT  593

seq1  AAACAAAGTACCTATGTTCCTAACAGAAACTGTTCCTAACAGAAACTTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGTACCTATGTTCCTAACAGAAACTGTTCCTAACAGAAACTTTT  643

seq1  CTTATTCTTTTGGCATGAAATTATTCTCCTTCTTGCCTACCTGAACTTAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCTTTTGGCATGAAATTATTCTCCTTCTTGCCTACCTGAACTTAA  693

seq1  TAAATTTTCCCCTTTTCATGATATCCACCAAATATTACATGTTCCTTTTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTCCCCTTTTCATGATATCCACCAAATATTACATGTTCCTTTTA  743

seq1  CAGTACTTTTAGAAATTATCATTGACCATTACTAAGTTATGTTTTTCCTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACTTTTAGAAATTATCATTGACCATTACTAAGTTATGTTTTTCCTA  793

seq1  ACTATTGTTCCAAATGTTTAAATTATATTCTCCAAATGATTAGTCCTAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGTTCCAAATGTTTAAATTATATTCTCCAAATGATTAGTCCTAAT  843

seq1  GGTGTTGCCTTCCTCTGAACTTCTGATTCAATCTCATGTGATTTTTTGCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTGCCTTCCTCTGAACTTCTGATTCAATCTCATGTGATTTTTTGCC  893

seq1  ATTTCTATCATCATTTCCGTGTGGCTTTTCTTCAGTATTGGTTTATTGTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTATCATCATTTCCGTGTGGCTTTTCTTCAGTATTGGTTTATTGTA  943

seq1  GTCTATTCTAATCTCCTGAATCAGGTTTTTGTTTTCTTTTTCTTTTTAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTCTAATCTCCTGAATCAGGTTTTTGTTTTCTTTTTCTTTTTAAA  993

seq1  TCTCATCTAGCTGTAATGTTGGAATGCATCATATATATATAACCTTTGAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTAGCTGTAATGTTGGAATGCATCATATATATATAACCTTTGAG  1043

seq1  TTGTTAGGACATACTGGTAATTGTTCTTTGGGATTTGTGTCGAAATTTCC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGGACATACTGGTAATTGTTCTTTGGGATTTGTGTCGAAATTTCC  1093

seq1  TATAGGTTCTTTTCAATGAGGTCATTCGTTATTGTGGAGTTGAGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTTCTTTTCAATGAGGTCATTCGTTATTGTGGAGTTGAGAATTC  1142

seq1: chr11_7120817_7121765
seq2: B6Ng01-028O20.g_68_1002

seq1  GAATTCACCTCCTTACATGAGTTCAATTCCCAGCACCATGAGAACAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTCCTTACATGAGTTCAATTCCCAGCACCATGAGAACAGCAA  50

seq1  AAAGCAAACTATTTTTATTTTGGAGTTATCAGATTTCTTCTCAAACTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAACTATTTTTATTTTGGAGTTATCAGATTTCTTCTCAAACTTTG  100

seq1  GATGTGTTTTTGTTTTTATTATATCTAGGTCCTGAAATTAAATACATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGTTTTTGTTTTTATTATATCTAGGTCCTGAAATTAAATACATACA  150

seq1  AATTTAGTGTCTTTCTGGCTCCTCAAATTGTTGGTCTTTCTAATGGAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGTGTCTTTCTGGCTCCTCAAATTGTTGGTCTTTCTAATGGAGCA  200

seq1  ATATTTATCTTTATTTCTTCTTTGGCTCTAATATCTATTCTCAATGATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATCTTTATTTCTTCTTTGGCTCTAATATCTATTCTCAATGATAG  250

seq1  TAAATAAAACCACATTGACTTCTTTTGGCTAGTTGTATGTTATATATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAACCACATTGACTTCTTTTGGCTAGTTGTATGTTATATATGCA  300

seq1  TAGTTCATTATTTCAGCCTACACTTACACACTCAATGGGCCTCCTTTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCATTATTTCAGCCTACACTTACACACTCAATGGGCCTCCTTTGCA  350

seq1  TGGAACATTGTGAGATTCTTTCAAACAGTTGTCTTAGTAATTGTTCTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACATTGTGAGATTCTTTCAAACAGTTGTCTTAGTAATTGTTCTATT  400

seq1  GCTGTGAAGACACACCGTGACCAAGGCAGCTCTTATTTAATTGCTTATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAAGACACACCGTGACCAAGGCAGCTCTTATTTAATTGCTTATAC  450

seq1  TTTCAGAGATTTAGTTCATTGTCCTCATGGTGGAGAGCATGACAGCAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAGATTTAGTTCATTGTCCTCATGGTGGAGAGCATGACAGCAGGC  500

seq1  ATGGCAGGCATGGTGCTGGAGCAGGAATTGAGAGTTACATCTTGATCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGGCATGGTGCTGGAGCAGGAATTGAGAGTTACATCTTGATCTGC  550

seq1  AGACAGAGAGAGACAGAGAGAGAGAGAGAGAGATCCTGATCTGCAGGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGAGAGACAGAGAGAGAGAGAGAGAGATCCTGATCTGCAGGCAG  600

seq1  AGACAGAGAGACAGAGACAGAGACAGAGAGGAGGAGAGAAGGTCTTTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGAGACAGAGACAGAGACAGAGAGGAGGAGAGAAGGTCTTTGGG  650

seq1  CAGCCTACTTTTCTTTACAACTGTGAGTCTTTTTTTTTTTTTTTTTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTACTTTTCTTTACAACTGTGAGTCTTTTTTTTTTTTTTTTTTTTT  700

seq1  TTTTTGGTTTTTCCTAAATTTTATTTTTTCAATTTTATATAAAATGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTTTTTCCTAAATTTTATTTTTTCAATTTTATATAAAATGAAAA  750

seq1  ATCATCACAAAATAATATAAAACATTATTATGCATTTACATATGATGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCACAAAATAATATAAAACATTATTATGCATTTACATATGATGTCC  800

seq1  TGTGGATTGTGGTTGGTTTTCTTTTGTTTATTTGTTATTTTGAGACAAGA  850
      |||||||||||| ||| |||||||||||   ||||   |||||||| |||
seq2  TGTGGATTGTGGGTGGGTTTCTTTTGTT--ATTGT--ATTTGAGAC-AGA  845

seq1  TCTCATTCTATAGCCTAGACTATTACTTTATTTTTTTCCCAATATTTTTT  900
      |||||||||||||||||||||| ||| |||||||||  |||||| |||||
seq2  TCTCATTCTATAGCCTAGACTA-TAC-TTATTTTTT--CCAATA-TTTTT  890

seq1  TATTAGGTATTTATTTCATTTACATTTCCAATGCTATCCCAAAAGTCCC  949
      ||||| ||| |||||||| |||||||||||||||||| |||||||||||
seq2  TATTA-GTA-TTATTTCA-TTACATTTCCAATGCTAT-CCAAAAGTCCC  935