BAC Information

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BAC

Clone NameB6Ng01-031C23
Chromosome11 (Build37)
Map Location 12,744,080 - 12,745,030
singlet/doubletsinglet
Overlap genenone
Upstream geneDdc, Grb10, Cobl
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031C23.bB6Ng01-031C23.g
ACCDH860873DH860874
length1,194945
definitionDH860873|Mus musculus domesticus DNA, BAC clone: B6Ng01-031C23, 5' end.DH860874|Mus musculus domesticus DNA, BAC clone: B6Ng01-031C23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagctacttcttcagtacctggactgcctctgtgctgtttccc
actgtgatgataatagactaaacctctgaaactataagcaagccccaatt
aagtgctttcttttataagagttgcctcctcagagactagcctgcgcagg
tgagagtgtggactacagaagctacacagcttctgggacaggcagaagtg
acagagcttctggggaagaccccatttcaggctccagacatccaggcaca
ttccccgccagaggagaggtatcctccccgctcaggagggctttgtcaga
gcacctgggggagccatcttggatcctaaatctctgagagactagtctgt
gcaggtgagagtgtggactacacaagcttcacagcttctgggacaggccc
cattttgggccttcaacttcagccaggaggcaggtccaaaagccagatat
ctgtgcaccttctctgcaagaggagagcttgcctgcagagagtaatctaa
ccacagaaattcaggagtgagctagtctcccaggttgctgacagaggcta
atagaatcacaggagaagcaagctccaaccagagacaactataacaacta
actccagagattaccagatggcgaaaggcaaatgtaagaatcttagtaac
agaaaccaagatcactcaccatcatcagaacccagctctcccacctcagc
cagtcctggataccccaacatacccaaaaagctagacttggatttaaaag
catatctcatgatgatggtagaggacatcaagaaggactttaataactca
cttaaagaaatacaggagaacactgctaaacaggtagaagtctttaagaa
aacagaaaaaataaccaaacaggtgatggaactgacaaaccatacaggac
ctaaaatggaagtagaacataaagaaaacccgagagagacaatgctggag
atagaaactagaagaatctggacaagatgcagcatcagcacagataaaga
gatggaagagagatctcaggtgcggagattcataagaactggcaaacatc
aagaaatggaaatccaaagatctagtcacatcagatcctgacatgaaaac
aacctaggtagatgtggatgagattcactaggcacaattcaattagaaag
tcccacttgaaagtctgcactacgaggcctggaactctccaatg
gtggtctctgatgggctttgcactcccaggcatctctctctctcccaaca
ctgtcctctccatgagcagaagattttcatctgttctgcctggagctgtt
ctgaaaaggatgcaggtgtctgtcaggcacaatgcccagtactcagctga
caaaatgcatgtgataccccatatgacataaagagataatagagaaagac
agtgagaccccagttctgttggggagaaaaatcctttggtttggtctcca
gtatttcttggtactttgaacctaaaatgcaagggttgactggagctggt
gtccatttagaggaaacaagccactgtagggtgtggcagctttgcagtgc
cactagccgctttaattttggtaatagcttttaattataacttacttttc
tatcttggaattgggcatcatgcttaaataccatttttttcaagacaggg
aactctttaactttcatatatttaaatatccaatatgagtcttcttgact
aagtcccttagtttttttgacttgtcgttgaattagtcttatattcccag
aaactttggaagaaagaaaaagagtgccaggagtagaaagctgtgctaag
cattctaggggaattcactgtggtgatcacttgccaatctagaaaaattg
attctggcaacattgctcgtaggaaagggatttattattatctctttttc
cttgtttcttagtcacattcttaactacataagtgacttttcactcagca
atagttgacaatgtgggttttataagaactagttatttccccactgacag
atttcaggccatacatgagctcctgtatttttgcttaaatgtgtctatat
acttagtgctagtatttcagttgtagagagaggcgtgctgtcataaagat
tcattttgtagattgtaaaagctttgagagccataggtactaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12744080_12745030
seq2: B6Ng01-031C23.g_75_1019

seq1  GTGGTCTCTGATGGGCTTTGCACTCCCAGGCATCTCTCTCTCTCCCAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTCTGATGGGCTTTGCACTCCCAGGCATCTCTCTCTCTCCCAACA  50

seq1  CTGTCCTCTCCATGAGCAGAAGATTTTCATCTGTTCTGCCTGGAGCTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTCTCCATGAGCAGAAGATTTTCATCTGTTCTGCCTGGAGCTGTT  100

seq1  CTGAAAAGGATGCAGGTGTCTGTCAGGCACAATGCCCAGTACTCAGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAGGATGCAGGTGTCTGTCAGGCACAATGCCCAGTACTCAGCTGA  150

seq1  CAAAATGCATGTGATACCCCATATGACATAAAGAGATAATAGAGAAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGCATGTGATACCCCATATGACATAAAGAGATAATAGAGAAAGAC  200

seq1  AGTGAGACCCCAGTTCTGTTGGGGAGAAAAATCCTTTGGTTTGGTCTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGACCCCAGTTCTGTTGGGGAGAAAAATCCTTTGGTTTGGTCTCCA  250

seq1  GTATTTCTTGGTACTTTGAACCTAAAATGCAAGGGTTGACTGGAGCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCTTGGTACTTTGAACCTAAAATGCAAGGGTTGACTGGAGCTGGT  300

seq1  GTCCATTTAGAGGAAACAAGCCACTGTAGGGTGTGGCAGCTTTGCAGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTTAGAGGAAACAAGCCACTGTAGGGTGTGGCAGCTTTGCAGTGC  350

seq1  CACTAGCCGCTTTAATTTTGGTAATAGCTTTTAATTATAACTTACTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGCCGCTTTAATTTTGGTAATAGCTTTTAATTATAACTTACTTTTC  400

seq1  TATCTTGGAATTGGGCATCATGCTTAAATACCATTTTTTTCAAGACAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGGAATTGGGCATCATGCTTAAATACCATTTTTTTCAAGACAGGG  450

seq1  AACTCTTTAACTTTCATATATTTAAATATCCAATATGAGTCTTCTTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTTAACTTTCATATATTTAAATATCCAATATGAGTCTTCTTGACT  500

seq1  AAGTCCCTTAGTTTTTTTGACTTGTCGTTGAATTAGTCTTATATTCCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCTTAGTTTTTTTGACTTGTCGTTGAATTAGTCTTATATTCCCAG  550

seq1  AAACTTTGGAAGAAAGAAAAAGAGTGCCAGGAGTAGAAAGCTGTGCTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTGGAAGAAAGAAAAAGAGTGCCAGGAGTAGAAAGCTGTGCTAAG  600

seq1  CATTCTAGGGGAATTCACTGTGGTGATCACTTGCCAATCTAGAAAAATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTAGGGGAATTCACTGTGGTGATCACTTGCCAATCTAGAAAAATTG  650

seq1  ATTCTGGCAACATTGCTCGTAGGAAAGGGATTTATTATTATCTCTTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGCAACATTGCTCGTAGGAAAGGGATTTATTATTATCTCTTTTTC  700

seq1  CTTGTTTCTTAGTCACATTCTTAACTACATAAGTGACTTTTCACTCAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTCTTAGTCACATTCTTAACTACATAAGTGACTTTTCACTCAGCA  750

seq1  ATAGTTGACAATGTGGGTTTTATAAGAACTAGTTATTTCCCCACTGACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTGACAATGTGGGTTTTATAAGAACTAGTTATTTCCCCACTGACAG  800

seq1  ATTTCAGGCCATACATGAGCTCCTGTATTTTTGCTTAAATGTGTCTTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATTTCAGGCCATACATGAGCTCCTGTATTTTTGCTTAAATGTGTC-TATA  849

seq1  TACTTAGTGCTAGTATTTTCAGTTGTAAGAGAAGGAGGCGTGCTGTCAAT  900
      ||||||||||||||| |||||||||| |||||  ||||||||||||| ||
seq2  TACTTAGTGCTAGTA-TTTCAGTTGT-AGAGA--GAGGCGTGCTGTC-AT  894

seq1  AAAGATTCATTTTGTAGATTGTAAAAGCTTTGAGAGCATTAGGTACTAAA  950
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  AAAGATTCATTTTGTAGATTGTAAAAGCTTTGAGAGCCATAGGTACTAAA  944

seq1  T  951
      |
seq2  T  945