BAC Information

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BAC

Clone NameB6Ng01-031K15
Chromosome11 (Build37)
Map Location 54,902,268 - 55,036,717
singlet/doubletdoublet
Overlap geneGm2a, LOC667832, Slc36a3, Slc36a2, Slc36a1
Upstream geneP4ha2, LOC623647, Dbi-ps, Csf2, Il3, Acsl6, 4930404A10Rik, LOC100041400, LOC100041411, Fnip1, Rapgef6, Cdc42se2, LOC677786, LOC100041463, Lyrm7, Hint1, Gpx3, Tnip1, LOC667826, Anxa6, Ccdc69
Downstream geneFat2, Sparc, Atox1, G3bp, Glra1, Nmur2, LOC100040816
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031K15.bB6Ng01-031K15.g
ACCDH861213DH861214
length729979
definitionDH861213|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K15, 5' end.DH861214|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,035,989 - 55,036,717)(54,902,268 - 54,903,255)
sequence
gaattccccctaggaataccatgccgagagaaggaaatggccgtggcaca
gaactagtctcctggaaaggggatgggattatacacagtgccaccgagca
ggagagactggagtggagacagtgatgggccgtgacgggcaggaccacac
cttgaccacctatctctttccttctatttaaacttcgcctcctgtcaggc
ccccgaagacgcacttggtggatccacagatccttcctccccgtgaggtt
atactgataagtctttttctgctcttcattatcaacccttacttaccaag
gacgggtggctgtacctggcttattagggatctagggcataggctctggc
cctaaatctatagcctttttagacaagggtgatataaccctggcttctgt
caaaggctgaggcagcctgacacctaagcctgcccagtagccatagaaaa
tgacaaccgactctgaggcctccacagagctgtgcacttgtacttaggta
aaggtcccgaaagctgcccaggaacacagaagctccccagaccagcctgg
gaggagcttcttctcctgtctaccgtaatgctacatgtggggccccaaga
cctggagtccgccccggtgacccgcccccaggttaattgtgattggtgaa
taaagatgctgacggctaatagctgggcagaagagacataggtggggttg
aggttttgcaggcttgtgggggggggggg
gaattcactctgtagaccagactggcctccatctcagaaatcctcctgtc
tctgtctcctgagtgctgggattaaaggcatgtgccactactgcctaccg
tattatttttttcactactggtgaggcaggtggcagagcctaggtagatg
gggctgctaacgttgagtttttgccctaaaaacacctgcagcaagaccct
gtctcagggctggagtgatggctcagtgatcaaaagcacttgctgttttt
ctacaggaacagagttcagtttccagcatccacattgtgaggctcacaac
tgcctgtaactctagttccagagggccaggacaacctcttctgcctgctt
gaccacctgcatacaggcgatactcccaaccctacacacacatccatgtt
aataaaaataagtctttttttttttttggtttttcgagacagggtttctc
tgtgtagccctgactgtcctggaactcactctgtagaccagactggcctc
aaactcagaaatctgcctgcctctgcctcccaagtgctgggattaaaggt
gtgtgccaccacgcccggcataaaaataagtcttaaaaacaaaaccctgt
cttaatgtcaaaatcatagaagagggctgagtgtgggattcagctcagtg
gtggagtggtcatttggcatgtgaggaaggcctgtggtcagtctctggta
ccaaaacccctcatcctctataaaaagatccaaggacctttctttctttc
ttttctttgactgggataaggaatggagagccaggtaaccatataaagat
gtgactgaacaaaatggaactacctacccaactggaatgtcagcaggacc
ttgccctggcatctcgtggctcctggtctatagaaaggattcgatgaaac
cgtggacacaagcatgtagaagacccaaagtgaggcacctcaggacctga
ggtagactgactaatagagaggaaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_55035989_55036717
seq2: B6Ng01-031K15.b_44_772 (reverse)

seq1  CCCCCCCCCCCCACAAGCCTGCAAAACCTCAACCCCACCTATGTCTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCACAAGCCTGCAAAACCTCAACCCCACCTATGTCTCTTC  50

seq1  TGCCCAGCTATTAGCCGTCAGCATCTTTATTCACCAATCACAATTAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGCTATTAGCCGTCAGCATCTTTATTCACCAATCACAATTAACCT  100

seq1  GGGGGCGGGTCACCGGGGCGGACTCCAGGTCTTGGGGCCCCACATGTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCGGGTCACCGGGGCGGACTCCAGGTCTTGGGGCCCCACATGTAGC  150

seq1  ATTACGGTAGACAGGAGAAGAAGCTCCTCCCAGGCTGGTCTGGGGAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACGGTAGACAGGAGAAGAAGCTCCTCCCAGGCTGGTCTGGGGAGCTT  200

seq1  CTGTGTTCCTGGGCAGCTTTCGGGACCTTTACCTAAGTACAAGTGCACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTCCTGGGCAGCTTTCGGGACCTTTACCTAAGTACAAGTGCACAG  250

seq1  CTCTGTGGAGGCCTCAGAGTCGGTTGTCATTTTCTATGGCTACTGGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGGAGGCCTCAGAGTCGGTTGTCATTTTCTATGGCTACTGGGCAG  300

seq1  GCTTAGGTGTCAGGCTGCCTCAGCCTTTGACAGAAGCCAGGGTTATATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGGTGTCAGGCTGCCTCAGCCTTTGACAGAAGCCAGGGTTATATCA  350

seq1  CCCTTGTCTAAAAAGGCTATAGATTTAGGGCCAGAGCCTATGCCCTAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTCTAAAAAGGCTATAGATTTAGGGCCAGAGCCTATGCCCTAGAT  400

seq1  CCCTAATAAGCCAGGTACAGCCACCCGTCCTTGGTAAGTAAGGGTTGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAATAAGCCAGGTACAGCCACCCGTCCTTGGTAAGTAAGGGTTGATA  450

seq1  ATGAAGAGCAGAAAAAGACTTATCAGTATAACCTCACGGGGAGGAAGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAGCAGAAAAAGACTTATCAGTATAACCTCACGGGGAGGAAGGAT  500

seq1  CTGTGGATCCACCAAGTGCGTCTTCGGGGGCCTGACAGGAGGCGAAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGATCCACCAAGTGCGTCTTCGGGGGCCTGACAGGAGGCGAAGTTT  550

seq1  AAATAGAAGGAAAGAGATAGGTGGTCAAGGTGTGGTCCTGCCCGTCACGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAGGAAAGAGATAGGTGGTCAAGGTGTGGTCCTGCCCGTCACGG  600

seq1  CCCATCACTGTCTCCACTCCAGTCTCTCCTGCTCGGTGGCACTGTGTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCACTGTCTCCACTCCAGTCTCTCCTGCTCGGTGGCACTGTGTATA  650

seq1  ATCCCATCCCCTTTCCAGGAGACTAGTTCTGTGCCACGGCCATTTCCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATCCCCTTTCCAGGAGACTAGTTCTGTGCCACGGCCATTTCCTTC  700

seq1  TCTCGGCATGGTATTCCTAGGGGGAATTC  729
      |||||||||||||||||||||||||||||
seq2  TCTCGGCATGGTATTCCTAGGGGGAATTC  729

seq1: chr11_54902268_54903255
seq2: B6Ng01-031K15.g_65_1043

seq1  GAATTCACTCTGTAGACCAGACTGGCCTCCATCTCAGAAATCCTCCTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGACTGGCCTCCATCTCAGAAATCCTCCTGTC  50

seq1  TCTGTCTCCTGAGTGCTGGGATTAAAGGCATGTGCCACTACTGCCTACCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCCTGAGTGCTGGGATTAAAGGCATGTGCCACTACTGCCTACCG  100

seq1  TATTATTTTTTTCACTACTGGTGAGGCAGGTGGCAGAGCCTAGGTAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTTTTTCACTACTGGTGAGGCAGGTGGCAGAGCCTAGGTAGATG  150

seq1  GGGCTGCTAACGTTGAGTTTTTGCCCTAAAAACACCTGCAGCAAGACCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCTAACGTTGAGTTTTTGCCCTAAAAACACCTGCAGCAAGACCCT  200

seq1  GTCTCAGGGCTGGAGTGATGGCTCAGTGATCAAAAGCACTTGCTGTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGGGCTGGAGTGATGGCTCAGTGATCAAAAGCACTTGCTGTTTTT  250

seq1  CTACAGGAACAGAGTTCAGTTTCCAGCATCCACATTGTGAGGCTCACAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGGAACAGAGTTCAGTTTCCAGCATCCACATTGTGAGGCTCACAAC  300

seq1  TGCCTGTAACTCTAGTTCCAGAGGGCCAGGACAACCTCTTCTGCCTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTAACTCTAGTTCCAGAGGGCCAGGACAACCTCTTCTGCCTGCTT  350

seq1  GACCACCTGCATACAGGCGATACTCCCAACCCTACACACACATCCATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACCTGCATACAGGCGATACTCCCAACCCTACACACACATCCATGTT  400

seq1  AATAAAAATAAGTCTTTTTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAATAAGTCTTTTTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTC  450

seq1  TGTGTAGCCCTGACTGTCCTGGAACTCACTCTGTAGACCAGACTGGCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGCCCTGACTGTCCTGGAACTCACTCTGTAGACCAGACTGGCCTC  500

seq1  AAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGT  550

seq1  GTGTGCCACCACGCCCGGCATAAAAATAAGTCTTAAAAACAAAACCCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCACCACGCCCGGCATAAAAATAAGTCTTAAAAACAAAACCCTGT  600

seq1  CTTAATGTCAAAATCATAGAAGAGGGCTGAGTGTGGGATTCAGCTCAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGTCAAAATCATAGAAGAGGGCTGAGTGTGGGATTCAGCTCAGTG  650

seq1  GTGGAGTGGTCATTTGGCATGTGAGGAAGGCCTGTGGTCAGTCTCTGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTGGTCATTTGGCATGTGAGGAAGGCCTGTGGTCAGTCTCTGGTA  700

seq1  CCAAAACCCCTCATCCTCTATAAAAAGATCCAAGGACCTTTCTTTCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACCCCTCATCCTCTATAAAAAGATCCAAGGACCTTTCTTTCTTTC  750

seq1  TTTTCTTTGACTGGGATAAGGAATGGAGAGCCAGGTAACCATATAAAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTGACTGGGATAAGGAATGGAGAGCCAGGTAACCATATAAAGAT  800

seq1  GTGACTGAACAAAAATGGAACTACCTACCCAACTGGAATGTCAGCAGGAC  850
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGAAC-AAAATGGAACTACCTACCCAACTGGAATGTCAGCAGGAC  849

seq1  CTTGCCCTGGCATCTCGTTGGCTCCTTGGTCTATAGAAAGAATTCAGATG  900
      ||||||||||||||||| ||||||| |||||||||||||| |||| ||||
seq2  CTTGCCCTGGCATCTCG-TGGCTCC-TGGTCTATAGAAAGGATTC-GATG  896

seq1  AAAACCGT-GACACAGAGCAGTGTAGAAGACCCAAAGTGAGGCACCTTCA  949
       ||||||| |||||| |||| ||||||||||||||||||||||||| |||
seq2  -AAACCGTGGACACA-AGCA-TGTAGAAGACCCAAAGTGAGGCACC-TCA  942

seq1  AGACCTGAGAGTAGACTGACTAAATAGAGAGGAAAAAAA  988
       |||||||| ||||||||||| |||||||||||||||||
seq2  GGACCTGAG-GTAGACTGACT-AATAGAGAGGAAAAAAA  979