BAC Information

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BAC

Clone NameB6Ng01-032B17
Chromosome11 (Build37)
Map Location 6,795,901 - 6,797,026
singlet/doubletsinglet
Overlap genenone
Upstream geneMyl7, Gck, Ykt6, Camk2b, LOC100042156, Nudcd3, LOC100042173, Npc1l1, LOC100041242, LOC665250, Ddx56, Tmed4, Ogdh, LOC100042227, Zmiz2, Ppia, H2afv, LOC665277, LOC665283, LOC626342, Purb, Myo1g, LOC100041286, Ccm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332
Downstream geneAdcy1, LOC100041347, Igfbp1, Igfbp3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032B17.bB6Ng01-032B17.g
ACCDH861538DH861539
length1,1991,125
definitionDH861538|Mus musculus domesticus DNA, BAC clone: B6Ng01-032B17, 5' end.DH861539|Mus musculus domesticus DNA, BAC clone: B6Ng01-032B17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccaatcaaaatggctatgttcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgctggtg
ggattgcaagctggtataaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccagaagatccagcaatacctctcctgggc
atatacccagaagatgttccaactggtaataaggacacatgctccactat
gctcatagcagccttatttataatagccagaagcttgaaagaacccagat
gtccctcagcagaggaatggatacagaaatggatacatttacacaatgga
gtactactcaacaattaaaaacaatgaattcatgaaattcttaagcaaat
ggatgcatctggaggatatcatcctgagtgaggtaactcaatcacaaaag
aacacacatgatatgcactcactggtaaatggatattagcccagaaactt
agaatatccaagatacaatttgcaaaattcatgaaattcaagaagggaga
ctaaagtgtgaatactttgttccttcttagaacggagaacagaataccct
tggaaggagttacagagacaaagttcagagctgagatggaaggaaggacc
atccagagactgcccacctggggatccatcccaaatacaaccaccaaacc
cagacactattgcatatgccagaaagagtttgctgacaggaccctgacat
agctctgtcttgtgaggttatgccagcgcctggcaaatacagaagtggat
gctcacagtcatctattgggatggaacacaggcccccaatggaggagcta
gagaaagtacccaaggagttaaaggggtctgcaaccctataggaggaaca
acagcatgagctaaccagtacctcccccccccccagagctgtgttctgta
gttcctatgaagcagagatggcttaattgccatcaatgggagagaggtcc
ttggtcttgcgagatctgttcctcatacaaagaatgccaaggccagaaat
ggaagtggtgaattgtgtaacagcaaggtagggatatcgggctttggat
gaattcatctgctcctggcacgaagacgagtcctggaaatcttgacgccg
actggggagacaatgtgaaagttgtctgagaaaggccaaacctacctcca
gaatgtgtatctggggtttggaggccaagcagataactttctgtgttcta
acgcttgtgtccctgtgtgtggaagacgtctctgctcagtgagagagagc
acagcctttaggcccggagggtcagaaagcagacacagctgaagatgtag
gcacagtgagcaagggtgcaaagatggagggaaaccaggcttcagatagg
actaaaatacagaattagccctgtagttagggacacttgggcttcagtga
ctttcttgtagatatctgggaaatcacaaggaagactctaagattaaaca
cacacacatacacacacacacacacacacacacacacacacacacacaca
tacacacacacacacaggctctggagagatggctcagtggttaagaccat
ttactcttctccagcactgtcacagctgcctatgacgtcagctccagggc
atcatatgcctctgacctttgcaggcacacatgtgcatgcgcacataccc
tcctgcttacatgtaattaaaaataaagtaagtcttaaaaatttatacaa
aatattctaatttttttctccaaatctagggtttgatcctgtggagacaa
aagtcaaaacagttatcaaagatattatgtaactttaataaaaattaaat
cacagagttaaaaaaagaacaagagtttggctatcctctgaacagggtgg
catttatagtttaaataaacataggagataatatgatcgactgaaggtct
gtagatctcaaggagtgatggatccttttccatggtcctgtttgcagtga
agaacatccatgggtcgctcaaagcacagatgtggacttggtgcacctga
ggagcttccactctgggaagacttttaggaagtaaaaaacttctatgtca
taggtaaaatcatacctccatgcctctgagccagtcgttttacggaaaga
aaaaaaatctacctgcgtcttcaatacgtgtctacctggcagaaaatgat
tgaacaacttccccttcttagcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_6795901_6797026
seq2: B6Ng01-032B17.g_69_1193

seq1  GAATTCATCTGCTCCTGGCACGAAGACGAGTCCTGGAAATCTTGACGCCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGCTCCTGGCACGAAGACGAGTCCTGGAAATCTTGACGCCG  50

seq1  ACTGGGGAGACAATGTGAAAGTTGTCTGAGAAAGGCCAAACCTACCTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGAGACAATGTGAAAGTTGTCTGAGAAAGGCCAAACCTACCTCCA  100

seq1  GAATGTGTATCTGGGGTTTGGAGGCCAAGCAGATAACTTTCTGTGTTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGTATCTGGGGTTTGGAGGCCAAGCAGATAACTTTCTGTGTTCTA  150

seq1  ACGCTTGTGTCCCTGTGTGTGGAAGACGTCTCTGCTCAGTGAGAGAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTTGTGTCCCTGTGTGTGGAAGACGTCTCTGCTCAGTGAGAGAGAGC  200

seq1  ACAGCCTTTAGGCCCGGAGGGTCAGAAAGCAGACACAGCTGAAGATGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTTTAGGCCCGGAGGGTCAGAAAGCAGACACAGCTGAAGATGTAG  250

seq1  GCACAGTGAGCAAGGGTGCAAAGATGGAGGGAAACCAGGCTTCAGATAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTGAGCAAGGGTGCAAAGATGGAGGGAAACCAGGCTTCAGATAGG  300

seq1  ACTAAAATACAGAATTAGCCCTGTAGTTAGGGACACTTGGGCTTCAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAATACAGAATTAGCCCTGTAGTTAGGGACACTTGGGCTTCAGTGA  350

seq1  CTTTCTTGTAGATATCTGGGAAATCACAAGGAAGACTCTAAGATTAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGTAGATATCTGGGAAATCACAAGGAAGACTCTAAGATTAAACA  400

seq1  CACACACATACACACACACACACACACACACACACACACACACACACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACATACACACACACACACACACACACACACACACACACACACACA  450

seq1  TACACACACACACACAGGCTCTGGAGAGATGGCTCAGTGGTTAAGACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACACACACACAGGCTCTGGAGAGATGGCTCAGTGGTTAAGACCAT  500

seq1  TTACTCTTCTCCAGCACTGTCACAGCTGCCTATGACGTCAGCTCCAGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTTCTCCAGCACTGTCACAGCTGCCTATGACGTCAGCTCCAGGGC  550

seq1  ATCATATGCCTCTGACCTTTGCAGGCACACATGTGCATGCGCACATACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATGCCTCTGACCTTTGCAGGCACACATGTGCATGCGCACATACCC  600

seq1  TCCTGCTTACATGTAATTAAAAATAAAGTAAGTCTTAAAAATTTATACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTTACATGTAATTAAAAATAAAGTAAGTCTTAAAAATTTATACAA  650

seq1  AATATTCTAATTTTTTTCTCCAAATCTAGGGTTTGATCCTGTGGAGACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTAATTTTTTTCTCCAAATCTAGGGTTTGATCCTGTGGAGACAA  700

seq1  AAGTCAAAACAGTTATC-AAGATATTATGTAAC-TTAATAAAAATTAAAT  748
      ||||||||||||||||| ||||||||||||||| ||||||||||||||||
seq2  AAGTCAAAACAGTTATCAAAGATATTATGTAACTTTAATAAAAATTAAAT  750

seq1  CACAGAGTTAAAAAAAGAACAAGAGTTTGGCTATCCTCTGAACAGGGTGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGTTAAAAAAAGAACAAGAGTTTGGCTATCCTCTGAACAGGGTGG  800

seq1  CATTTATAGTTTTAAATAAACATAGGAGATAATATGATCGACTGAAGGTC  848
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATAG-TTTAAATAAACATAGGAGATAATATGATCGACTGAAGGTC  849

seq1  TGTAGATCTC-AGGAGTGATGGATCC-TTTCCATGGTCCTGTTTGCAGTG  896
      |||||||||| ||||||||||||||| |||||||||||||||||||||||
seq2  TGTAGATCTCAAGGAGTGATGGATCCTTTTCCATGGTCCTGTTTGCAGTG  899

seq1  AAGAACATCCAT-GGTCGCTCAAAGCACAGATGTGGACCTGGTGCACCTG  945
      |||||||||||| ||||||||||||||||||||||||| |||||||||||
seq2  AAGAACATCCATGGGTCGCTCAAAGCACAGATGTGGACTTGGTGCACCTG  949

seq1  AGGAGCCTTCACATCTGGGAAGACTTTTAGGAAGTAAAAAAACTTCTATG  995
      |||||| | ||| |||||||||||||||||||||| ||||||||||||||
seq2  AGGAGCTTCCAC-TCTGGGAAGACTTTTAGGAAGT-AAAAAACTTCTATG  997

seq1  TCATTAGGTTAAAATCATA-CTCCATG-CTCTGAGCCAGTCGTTTTAACA  1043
      ||| |||| |||||||||| ||||||| |||||||||||||||||| || 
seq2  TCA-TAGG-TAAAATCATACCTCCATGCCTCTGAGCCAGTCGTTTT-ACG  1044

seq1  GAAAGAAAATAAATCTAACCTGCAGTCTTTCAATAACGTG-CTAACTGGC  1092
      ||||||||| |||||| |||||| ||| |||||| ||||| ||| |||||
seq2  GAAAGAAAAAAAATCT-ACCTGC-GTC-TTCAAT-ACGTGTCTACCTGGC  1090

seq1  AGTAAATGATTGACAAACTTCCCCTTC-AAGCTTC  1126
      || ||||||||||  ||||||||||||  ||||||
seq2  AGAAAATGATTGAACAACTTCCCCTTCTTAGCTTC  1125