BAC Information

Click to search

BAC

Clone NameB6Ng01-032O16
Chromosome11 (Build37)
Map Location 57,466,465 - 57,618,844
singlet/doubletdoublet
Overlap geneGalnt10, Sap30l
Upstream geneGria1, LOC667878, 1810073G14Rik, Mfap3
Downstream geneHand1, LOC624605, Larp1, LOC676527, LOC667947, Cnot8, Gemin5, Mrpl22, Irgb10, Igtp, LOC263305, LOC100041816, EG668249, 4930438A08Rik, Zfp692, Zfp672, 1700047K16Rik, Sh3bp5l, 2210415F13Rik, LOC624814, 1810065E05Rik, OTTMUSG00000005737, 4930504O13Rik, Olfr30, Olfr333-ps1, Olfr332, Olfr331, Olfr330, Olfr329, Olfr328, Olfr327-ps1, Olfr325, Olfr324, 2210407C18Rik, Olfr323, Trim58, Olfr216, OTTMUSG00000005755, Olfr320, LOC668058, Olfr319, Olfr318, Olfr317, Olfr316, Olfr315, Olfr314, 3100002J23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032O16.bB6Ng01-032O16.g
ACCDH862116DH862117
length2511,021
definitionDH862116|Mus musculus domesticus DNA, BAC clone: B6Ng01-032O16, 5' end.DH862117|Mus musculus domesticus DNA, BAC clone: B6Ng01-032O16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,618,594 - 57,618,844)(57,466,465 - 57,467,481)
sequence
aggctgctttgtggagggaacaatgaaaactgtttaatttgatgattatc
agtttcttgtggttggattggtgagtcatgagtcattccgagtttacact
gtgatgctgtcttgtacacagcaggcgagaaataagtgctgatgcaccaa
tgtaggccctctcatatctacaaacggccaaatgacttttgctggtaaaa
gccacctctttttttttttttttttttttggtttattttttgagtcaggg
t
gaattctttcctgagcagttgcctccaggaagtgtgtttggctacgctag
ccccaggcgttctcctgagcctcccttgcttggatggggagacttcctgg
gtacccgctcttcttggcgagacatctgtgttaatctgtcacactctgtg
gtcatttctgacccgtgcagactacttcatgaagtcagggatgcacttct
cctgtttgttcccacattacacaatgaccgaagactgccagacaagctgt
atggctgattcttagtagccactggtcagggctggaggtttagcctcaag
aatggctttccatgagctttggggtactgagaaccccaagcctgggaagg
atggagacctcaagggtgtggctgagcttcatccctggagcaccccgcac
acacatctgggggacccaccccgtcttgagcccactccagctgccacaag
aatgcccccagcaggcctcttctctgtagctttcctgttgggcagtgagg
aacagctctctgccagacgccagcaggtcgggctctgagcctgtgtcctg
gtctagatccggtctgagtggtggtgaccttttgcatgttctactttggg
ctgggtgcctcccacctgctgccttccagggcggggttgtacctgtggga
ccaggaccaggacaaggaccaggaaccaggaaccccagggggaaggcggt
tttatggagaactcagcagccttttccctgtagcgacaagggcagaaggg
accgtgtggagctgtgaaccagttctatctcattcttaggcctggctgct
cctatcttagtcccatgactggcctttgaagcatcaaactccttctcccc
aattgagcatgttacacttatgtcacaacgccctggtgttagcttaagat
ggggtgactggaggtcagctaagatggcataacgcatctgtagtcacaca
tacaagcagtggggggaaatgggctgctatgtgacttcagtcagtccctt
ccctttggcgtacgaacaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_57618594_57618844
seq2: B6Ng01-032O16.b_53_303 (reverse)

seq1  ACCCTGACTCAAAAAATAAACCAAAAAAAAAAAAAAAAAAAAAGAGGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGACTCAAAAAATAAACCAAAAAAAAAAAAAAAAAAAAAGAGGTGG  50

seq1  CTTTTACCAGCAAAAGTCATTTGGCCGTTTGTAGATATGAGAGGGCCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACCAGCAAAAGTCATTTGGCCGTTTGTAGATATGAGAGGGCCTAC  100

seq1  ATTGGTGCATCAGCACTTATTTCTCGCCTGCTGTGTACAAGACAGCATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTGCATCAGCACTTATTTCTCGCCTGCTGTGTACAAGACAGCATCA  150

seq1  CAGTGTAAACTCGGAATGACTCATGACTCACCAATCCAACCACAAGAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTAAACTCGGAATGACTCATGACTCACCAATCCAACCACAAGAAAC  200

seq1  TGATAATCATCAAATTAAACAGTTTTCATTGTTCCCTCCACAAAGCAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATCATCAAATTAAACAGTTTTCATTGTTCCCTCCACAAAGCAGCC  250

seq1  T  251
      |
seq2  T  251

seq1: chr11_57466465_57467481
seq2: B6Ng01-032O16.g_70_1090

seq1  GAATTCTTTCCTGAGCAGTTGCCTCCAGGAAGTGTGTTTGGCTACGCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTGAGCAGTTGCCTCCAGGAAGTGTGTTTGGCTACGCTAG  50

seq1  CCCCAGGCGTTCTCCTGAGCCTCCCTTGCTTGGATGGGGAGACTTCCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGCGTTCTCCTGAGCCTCCCTTGCTTGGATGGGGAGACTTCCTGG  100

seq1  GTACCCGCTCTTCTTGGCGAGACATCTGTGTTAATCTGTCACACTCTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCGCTCTTCTTGGCGAGACATCTGTGTTAATCTGTCACACTCTGTG  150

seq1  GTCATTTCTGACCCGTGCAGACTACTTCATGAAGTCAGGGATGCACTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTCTGACCCGTGCAGACTACTTCATGAAGTCAGGGATGCACTTCT  200

seq1  CCTGTTTGTTCCCACATTACACAATGACCGAAGACTGCCAGACAAGCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGTTCCCACATTACACAATGACCGAAGACTGCCAGACAAGCTGT  250

seq1  ATGGCTGATTCTTAGTAGCCACTGGTCAGGGCTGGAGGTTTAGCCTCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGATTCTTAGTAGCCACTGGTCAGGGCTGGAGGTTTAGCCTCAAG  300

seq1  AATGGCTTTCCATGAGCTTTGGGGTACTGAGAACCCCAAGCCTGGGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTTTCCATGAGCTTTGGGGTACTGAGAACCCCAAGCCTGGGAAGG  350

seq1  ATGGAGACCTCAAGGGTGTGGCTGAGCTTCATCCCTGGAGCACCCCGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGACCTCAAGGGTGTGGCTGAGCTTCATCCCTGGAGCACCCCGCAC  400

seq1  ACACATCTGGGGGACCCACCCCGTCTTGAGCCCACTCCAGCTGCCACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCTGGGGGACCCACCCCGTCTTGAGCCCACTCCAGCTGCCACAAG  450

seq1  AATGCCCCCAGCAGGCCTCTTCTCTGTAGCTTTCCTGTTGGGCAGTGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCCCCAGCAGGCCTCTTCTCTGTAGCTTTCCTGTTGGGCAGTGAGG  500

seq1  AACAGCTCTCTGCCAGACGCCAGCAGGTCGGGCTCTGAGCCTGTGTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTCTCTGCCAGACGCCAGCAGGTCGGGCTCTGAGCCTGTGTCCTG  550

seq1  GTCTAGATCCGGTCTGAGTGGTGGTGACCTTTTGCATGTTCTACTTTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGATCCGGTCTGAGTGGTGGTGACCTTTTGCATGTTCTACTTTGGG  600

seq1  CTGGGTGCCTCCCACCTGCTGCCTTCCAGGGCGGGGTTGTACCTGTGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGCCTCCCACCTGCTGCCTTCCAGGGCGGGGTTGTACCTGTGGGA  650

seq1  CCAGGACCAGGACAAGGACCAGGAACCAGGAACCCCAGGGGGAAGGCGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACCAGGACAAGGACCAGGAACCAGGAACCCCAGGGGGAAGGCGGT  700

seq1  TTTATGGAGAACTCAGCAGCC-TTTCCCTGTAGCGACAAGGGCAGAAGGG  749
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTATGGAGAACTCAGCAGCCTTTTCCCTGTAGCGACAAGGGCAGAAGGG  750

seq1  ACCGTGTGGAGCTGTGAACCAGTTCTATCTCATTCTTAGGCCTGGCTGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTGTGGAGCTGTGAACCAGTTCTATCTCATTCTTAGGCCTGGCTGCT  800

seq1  CCTATCTTAGGTCCCATGACTGGCCTTTGAAGCATCAAACTCCTTCTCCC  849
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTTA-GTCCCATGACTGGCCTTTGAAGCATCAAACTCCTTCTCCC  849

seq1  CAAATGAGCATGTTACAC-TATGTCACAACGCCCTGGTGTTAGCTAAAGA  898
      ||| |||||||||||||| |||||||||||||||||||||||||| ||||
seq2  CAATTGAGCATGTTACACTTATGTCACAACGCCCTGGTGTTAGCTTAAGA  899

seq1  TGGGGTGACT-GAGGTCAGC-AAGATGCAGTAACGCATCTGTAGCCACAC  946
      |||||||||| ||||||||| ||||||   |||||||||||||| |||||
seq2  TGGGGTGACTGGAGGTCAGCTAAGATGGCATAACGCATCTGTAGTCACAC  949

seq1  AATCAAGCAGT-GGGGGAAATGGGCTGCTATGTGACTCCAGTCTGTCCCC  995
      |  |||||||| ||||||||||||||||||||||||| ||||| ||||| 
seq2  ATACAAGCAGTGGGGGGAAATGGGCTGCTATGTGACTTCAGTCAGTCCCT  999

seq1  TCCC-TTGGCGTACAGAACAAGT  1017
      |||| ||||||||| ||||||||
seq2  TCCCTTTGGCGTAC-GAACAAGT  1021