BAC Information

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BAC

Clone NameB6Ng01-033D17
Chromosome11 (Build37)
Map Location 62,510,795 - 62,629,237
singlet/doubletdoublet
Overlap geneZfp287, LOC626482, LOC100042766, Zfp286
Upstream geneSlc5a10, 2310040C09Rik, Prpsap2, Ulk2, Akap10, D630015H07, LOC626325, LOC100041558, Specc1, Adora2b, 2410012H22Rik, Ttc19, Ncor1, Pigl, Prr6, Ubb, Trpv2, 2410006H16Rik, BC046404, BC025076
Downstream geneTrim16, Fbxw10, Fam18b, Cdrt4, Tekt3, Pmp22, LOC433423, LOC100042799
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033D17.bB6Ng01-033D17.g
ACCDH862344DH862345
length822205
definitionDH862344|Mus musculus domesticus DNA, BAC clone: B6Ng01-033D17, 5' end.DH862345|Mus musculus domesticus DNA, BAC clone: B6Ng01-033D17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,510,795 - 62,511,616)(62,629,033 - 62,629,237)
sequence
gaattctaccatgagaagctggaggaaataaaggacaagaagaagttctg
caggttgtatgtagaagacctgtcgaaggaagccacagccatcaacatga
aaaacgaggctctgcagaagctgtggccacagatgtgcatggagcttgtc
aaggatgccgtcatagagatccacagcaaagattcctacatgaaactctg
cctgcagcagatcactgaccagaaatagggacggctcctacttcagcctt
gggcaattggagcttttttaaagtttggcaagatgcaggttagacacgat
gtccactactactgcacagtctagaaagagtggaatcaaagtctcccccc
acacgccacacactgtggagaaaggagggaggcaggagagagggggactc
tttcccatacatgctgaccacataaccttgggaaaccaagcagcgattgg
aggaggcctggctgctgggtcagaattgctccttcagctcctgctctgac
tggtgcgcctgcccaagtctcaagcttgctgtgtgccgacgggctagcat
gagatgcctccaccaacctccagctgagactttttctctctttttatttt
gtctttttattttatgtcaatacttcaaagccaagtatatgttctttttt
ttttttatgagcgaagaataaatacattagttagaaagagaaaaaagaat
attgtctctgttagggacattctccagtggaaagtcacacatcttagaat
tcatgggcagcaaaaaattggttctgatgggtgaaaaataaagacacaag
ttgggagagtgggggttggggg
aaagcaatttcctgccccagaactgtgatgactcacacaacacacacagc
caatagctggtaggtaggtgatcacacacagccaatagctggtaggtagg
tggtcacacacagccaatagctggtaggtaggtggtcacacacagccata
gctggtgggtaggtgatctgcatggggtgttttactcagaaatggggggg
gggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_62510795_62511616
seq2: B6Ng01-033D17.b_44_865

seq1  GAATTCTACCATGAGAAGCTGGAGGAAATAAAGGACAAGAAGAAGTTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCATGAGAAGCTGGAGGAAATAAAGGACAAGAAGAAGTTCTG  50

seq1  CAGGTTGTATGTAGAAGACCTGTCGAAGGAAGCCACAGCCATCAACATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTGTATGTAGAAGACCTGTCGAAGGAAGCCACAGCCATCAACATGA  100

seq1  AAAACGAGGCTCTGCAGAAGCTGTGGCCACAGATGTGCATGGAGCTTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACGAGGCTCTGCAGAAGCTGTGGCCACAGATGTGCATGGAGCTTGTC  150

seq1  AAGGATGCCGTCATAGAGATCCACAGCAAAGATTCCTACATGAAACTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGCCGTCATAGAGATCCACAGCAAAGATTCCTACATGAAACTCTG  200

seq1  CCTGCAGCAGATCACTGACCAGAAATAGGGACGGCTCCTACTTCAGCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGCAGATCACTGACCAGAAATAGGGACGGCTCCTACTTCAGCCTT  250

seq1  GGGCAATTGGAGCTTTTTTAAAGTTTGGCAAGATGCAGGTTAGACACGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATTGGAGCTTTTTTAAAGTTTGGCAAGATGCAGGTTAGACACGAT  300

seq1  GTCCACTACTACTGCACAGTCTAGAAAGAGTGGAATCAAAGTCTCCCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACTACTACTGCACAGTCTAGAAAGAGTGGAATCAAAGTCTCCCCCC  350

seq1  ACACGCCACACACTGTGGAGAAAGGAGGGAGGCAGGAGAGAGGGGGACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGCCACACACTGTGGAGAAAGGAGGGAGGCAGGAGAGAGGGGGACTC  400

seq1  TTTCCCATACATGCTGACCACATAACCTTGGGAAACCAAGCAGCGATTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCATACATGCTGACCACATAACCTTGGGAAACCAAGCAGCGATTGG  450

seq1  AGGAGGCCTGGCTGCTGGGTCAGAATTGCTCCTTCAGCTCCTGCTCTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCCTGGCTGCTGGGTCAGAATTGCTCCTTCAGCTCCTGCTCTGAC  500

seq1  TGGTGCGCCTGCCCAAGTCTCAAGCTTGCTGTGTGCCGACGGGCTAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCGCCTGCCCAAGTCTCAAGCTTGCTGTGTGCCGACGGGCTAGCAT  550

seq1  GAGATGCCTCCACCAACCTCCAGCTGAGACTTTTTCTCTCTTTTTATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGCCTCCACCAACCTCCAGCTGAGACTTTTTCTCTCTTTTTATTTT  600

seq1  GTCTTTTTATTTTATGTCAATACTTCAAAGCCAAGTATATGTTCTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTTATTTTATGTCAATACTTCAAAGCCAAGTATATGTTCTTTTTT  650

seq1  TTTTTTATGAGCGAAGAATAAATACATTAGTTAGAAAGAGAAAAAAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATGAGCGAAGAATAAATACATTAGTTAGAAAGAGAAAAAAGAAT  700

seq1  ATTGTCTCTGTTAGGGACATTCTCCAGTGGAAAGTCACACATCTTAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTCTGTTAGGGACATTCTCCAGTGGAAAGTCACACATCTTAGAAT  750

seq1  TCATGGGCAGCAAAAAATTGGTTCTGATGGGTGAAAAATAAAGACACAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGCAGCAAAAAATTGGTTCTGATGGGTGAAAAATAAAGACACAAG  800

seq1  TTGGGAGAGTGGGGGTTGGGGG  822
      ||||||||||||||||||||||
seq2  TTGGGAGAGTGGGGGTTGGGGG  822

seq1: chr11_62629033_62629237
seq2: B6Ng01-033D17.g_75_279 (reverse)

seq1  CTCCCCCCCCCCATTTCTGAGTAAAACACCCCATGCAGATCACCTACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCCCCCCATTTCTGAGTAAAACACCCCATGCAGATCACCTACCCA  50

seq1  CCAGCTATGGCTGTGTGTGACCACCTACCTACCAGCTATTGGCTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTATGGCTGTGTGTGACCACCTACCTACCAGCTATTGGCTGTGTGT  100

seq1  GACCACCTACCTACCAGCTATTGGCTGTGTGTGATCACCTACCTACCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACCTACCTACCAGCTATTGGCTGTGTGTGATCACCTACCTACCAGC  150

seq1  TATTGGCTGTGTGTGTTGTGTGAGTCATCACAGTTCTGGGGCAGGAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGCTGTGTGTGTTGTGTGAGTCATCACAGTTCTGGGGCAGGAAATT  200

seq1  GCTTT  205
      |||||
seq2  GCTTT  205