BAC Information

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BAC

Clone NameB6Ng01-033D18
Chromosome11 (Build37)
Map Location 17,628,113 - 17,759,320
singlet/doubletdoublet
Overlap genenone
Upstream geneEgfr, 2810442I21Rik, A630050E13Rik, Plek, 1500041B16Rik, LOC100042644, Ppp3r1, Pno1, AI553587, C1d, LOC382486, EG665748
Downstream geneEtaa1, LOC327871, LOC627696, LOC627716, LOC665796
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033D18.bB6Ng01-033D18.g
ACCDH862346DH862347
length892460
definitionDH862346|Mus musculus domesticus DNA, BAC clone: B6Ng01-033D18, 5' end.DH862347|Mus musculus domesticus DNA, BAC clone: B6Ng01-033D18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,758,429 - 17,759,320)(17,628,113 - 17,628,578)
sequence
gaattcatacgttttaaaactttccaatgtaaataaagaaatggccttta
atagaaaaataaatatccacactgtctgtgggaatagagataactgacct
ctaaagacagacatcagaaccctgcagtaaatattgctaatgacaggctc
atcacacaatccactggtacagcttttcattcgtggggcacaggcacaat
tattcacagtgaacaactaagctagctgacaaccggtgtctatgccaagg
tggtaaagtttctcttatgaactcctaagaccttggttatctgcctttat
cagtgataggagccaggcattaggctggcctggaggagaagggtgggaag
ggtccagtcttaccagtcaagcagagttctcaaaggttggattctcagtg
gcactgagaacttcacttggatttaagggaaagttgaaaggtgaaacata
accttgaataataagctggttgagggcacgaatacaatttacaatggcat
cgtcaagatcaagtggtcaaaaacaagattttgttgcagtttggttgagc
atccagtcaaaattgttctcaaattgattgacagatagactttttcaaaa
taaaattgcctgacttttcacaaagatacaatcttaggagttggatcaga
aggaaatataggcaatgtaggaaatgtttcaatgtctggtctcattcttg
aacccagggattttgttttgaagcttctgcaatatcaggaatcctactac
actggagtaattgaagaaaaaacgttggaagtcaccctcctttatgcact
ggcttcttggccaataaatgaagtccagaagatggccaagtgatttcttt
cttcctttctttctttccttccttccttccttccttccttcc
ttcataaacatgttagcttttgattttctcaagtcactcattactacata
aaccacctgcttctggtgcagttttacctctgccttatcttgcaaaagct
gacttaaaataaatagttggttctcataattaggtagaaaatacagtata
aaaaacaaggaagagcacgggcaaaggaggttccattacgctgttcaaac
accgactggttcctgctgcagctttgccgcacgtgctttcttcttgctat
tactgcttttcttactgcatttttgtttgcttggttctggtccttgttgc
tgatgtgtttcctttcattttattttcccaacagggtcttgctatgtagc
tggaaggttctggaattcactgggcagtcgagggtgaccttaaactcttc
cttttctgtttttattttttaacattaatttgtgtgtgtgtgtgtgtgtg
tgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_17758429_17759320
seq2: B6Ng01-033D18.b_42_933 (reverse)

seq1  GGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGGAAGAAAGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGGAAGAAAGAAAT  50

seq1  CACTTGGCCATCTTCTGGACTTCATTTATTGGCCAAGAAGCCAGTGCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGGCCATCTTCTGGACTTCATTTATTGGCCAAGAAGCCAGTGCATA  100

seq1  AAGGAGGGTGACTTCCAACGTTTTTTCTTCAATTACTCCAGTGTAGTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGGTGACTTCCAACGTTTTTTCTTCAATTACTCCAGTGTAGTAGG  150

seq1  ATTCCTGATATTGCAGAAGCTTCAAAACAAAATCCCTGGGTTCAAGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGATATTGCAGAAGCTTCAAAACAAAATCCCTGGGTTCAAGAATG  200

seq1  AGACCAGACATTGAAACATTTCCTACATTGCCTATATTTCCTTCTGATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGACATTGAAACATTTCCTACATTGCCTATATTTCCTTCTGATCC  250

seq1  AACTCCTAAGATTGTATCTTTGTGAAAAGTCAGGCAATTTTATTTTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTAAGATTGTATCTTTGTGAAAAGTCAGGCAATTTTATTTTGAAA  300

seq1  AAGTCTATCTGTCAATCAATTTGAGAACAATTTTGACTGGATGCTCAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTATCTGTCAATCAATTTGAGAACAATTTTGACTGGATGCTCAACC  350

seq1  AAACTGCAACAAAATCTTGTTTTTGACCACTTGATCTTGACGATGCCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCAACAAAATCTTGTTTTTGACCACTTGATCTTGACGATGCCATT  400

seq1  GTAAATTGTATTCGTGCCCTCAACCAGCTTATTATTCAAGGTTATGTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTGTATTCGTGCCCTCAACCAGCTTATTATTCAAGGTTATGTTTC  450

seq1  ACCTTTCAACTTTCCCTTAAATCCAAGTGAAGTTCTCAGTGCCACTGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCAACTTTCCCTTAAATCCAAGTGAAGTTCTCAGTGCCACTGAGA  500

seq1  ATCCAACCTTTGAGAACTCTGCTTGACTGGTAAGACTGGACCCTTCCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAACCTTTGAGAACTCTGCTTGACTGGTAAGACTGGACCCTTCCCAC  550

seq1  CCTTCTCCTCCAGGCCAGCCTAATGCCTGGCTCCTATCACTGATAAAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCCTCCAGGCCAGCCTAATGCCTGGCTCCTATCACTGATAAAGGC  600

seq1  AGATAACCAAGGTCTTAGGAGTTCATAAGAGAAACTTTACCACCTTGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACCAAGGTCTTAGGAGTTCATAAGAGAAACTTTACCACCTTGGCA  650

seq1  TAGACACCGGTTGTCAGCTAGCTTAGTTGTTCACTGTGAATAATTGTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACCGGTTGTCAGCTAGCTTAGTTGTTCACTGTGAATAATTGTGCC  700

seq1  TGTGCCCCACGAATGAAAAGCTGTACCAGTGGATTGTGTGATGAGCCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCCACGAATGAAAAGCTGTACCAGTGGATTGTGTGATGAGCCTGT  750

seq1  CATTAGCAATATTTACTGCAGGGTTCTGATGTCTGTCTTTAGAGGTCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCAATATTTACTGCAGGGTTCTGATGTCTGTCTTTAGAGGTCAGT  800

seq1  TATCTCTATTCCCACAGACAGTGTGGATATTTATTTTTCTATTAAAGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTATTCCCACAGACAGTGTGGATATTTATTTTTCTATTAAAGGCC  850

seq1  ATTTCTTTATTTACATTGGAAAGTTTTAAAACGTATGAATTC  892
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTATTTACATTGGAAAGTTTTAAAACGTATGAATTC  892

seq1: chr11_17628113_17628578
seq2: B6Ng01-033D18.g_67_532

seq1  GAATTCTTCATAAACATGTTAGCTTTTGATTTTCTCAAGTCACTCATTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATAAACATGTTAGCTTTTGATTTTCTCAAGTCACTCATTAC  50

seq1  TACATAAACCACCTGCTTCTGGTGCAGTTTTACCTCTGCCTTATCTTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAACCACCTGCTTCTGGTGCAGTTTTACCTCTGCCTTATCTTGCA  100

seq1  AAAGCTGACTTAAAATAAATAGTTGGTTCTCATAATTAGGTAGAAAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGACTTAAAATAAATAGTTGGTTCTCATAATTAGGTAGAAAATAC  150

seq1  AGTATAAAAAACAAGGAAGAGCACGGGCAAAGGAGGTTCCATTACGCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAAAAACAAGGAAGAGCACGGGCAAAGGAGGTTCCATTACGCTGT  200

seq1  TCAAACACCGACTGGTTCCTGCTGCAGCTTTGCCGCACGTGCTTTCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACACCGACTGGTTCCTGCTGCAGCTTTGCCGCACGTGCTTTCTTCT  250

seq1  TGCTATTACTGCTTTTCTTACTGCATTTTTGTTTGCTTGGTTCTGGTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTACTGCTTTTCTTACTGCATTTTTGTTTGCTTGGTTCTGGTCCT  300

seq1  TGTTGCTGATGTGTTTCCTTTCATTTTATTTTCCCAACAGGGTCTTGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTGATGTGTTTCCTTTCATTTTATTTTCCCAACAGGGTCTTGCTA  350

seq1  TGTAGCTGGAAGGTTCTGGAATTCACTGGGCAGTCGAGGGTGACCTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTGGAAGGTTCTGGAATTCACTGGGCAGTCGAGGGTGACCTTAAA  400

seq1  CTCTTCCTTTTCTGTTTTTATTTTTTAACATTAATTTGTGTGTGTGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTTTTCTGTTTTTATTTTTTAACATTAATTTGTGTGTGTGTGTG  450

seq1  TGTGTGTGTGTGTGTG  466
      ||||||||||||||||
seq2  TGTGTGTGTGTGTGTG  466