BAC Information

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BAC

Clone NameB6Ng01-033L24
Chromosome11 (Build37)
Map Location 12,601,134 - 12,602,278
singlet/doubletsinglet
Overlap genenone
Upstream geneIkzf1, Fignl1, Ddc, Grb10, Cobl
Downstream geneLOC627244
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033L24.bB6Ng01-033L24.g
ACCDH862713DH862714
length1,2321,130
definitionDH862713|Mus musculus domesticus DNA, BAC clone: B6Ng01-033L24, 5' end.DH862714|Mus musculus domesticus DNA, BAC clone: B6Ng01-033L24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccagtggagcctataccatccttgcccccgggaaccatgggc
ctcattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaagggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggaaaaatctgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttaa
atgatagacctaagctccgccttaagattaatggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatctctacacattggtggcc
caaagcatggcccaccacagagtcatctcattcattacagggcctaggat
atcaatcatgtcccactataagctccattgccttgacgtgggaatcctct
gaaggacagcaagggaaattcataccttatgtgctcccactcccggttaa
cctctggggaagggatattatgcagcatttgggccttattttgtccaatg
aaaacgccccatcgggagggtattcaactaaagcaaaaatatcatggcaa
agatgggttataaagaaggaaaagggttaggacatcaagaacagggaagg
atagagcccatctcacctaatggaaaccaagacagacagggtctgggttt
tcctagcggccattggggcagcacgacccataccatgaaacaggggaccc
agtgtggtcctcattgcacctatcctctgaaaaactagaagctgtgatca
ctggtagagaacataactagccatttgacctctacctcacttggaatact
ccaatttttgtaatagaaaagtcagcagtggactcgctcctgacctctga
gctatagaccatgaactatgccgaatacagtcgtattcggcttactgtcg
actaatatagagtcacgatgttcctctagctg
gaattcagtcttaattctcaaactatctaattatttatggaacagtgctt
acagaatgagtgggaggaatatgtcagtcaccatagcatcactgtttagc
tctcatgctttggtaagagcacaacctaccctcaattgttcttgaatgaa
agaattaacaaaaataggagacacgtaattatcagcatatgtgggattct
gtttgatcatgagattgtctcttcatttgtcattctgaactatgaataat
tttatttctatgattcacatagatgctttctctgggagctaatacaatgc
atggtgcatagatgactcttattagataggaattagtactaacaagcaaa
atgggcatgctcaatataacagaaatattccagcctctatttcaacatgc
ggagcctgattcaagatgtaccagacaaagccaacagaaggtactccttg
ccttgagtctgctacatattcaaccttggtttcaagctttcaaagtacta
atccctcttcaccaagaaaatatgaggaggggggatctaaccatgtagtg
acaaatgtgcaatctctgtcttgtatggtaattctttaatcattcagtca
gtatttgagtagtatctagtctcagccacaaaagatgctaatcttttgat
taaaaaagattttccagctctaaatgccttggatttctgagaaataaaat
gagatcattagattaaacccttgtgactcatctagctcttacttataata
atcccaataaaatataaggtgtttacacaaaacttcttgagtgctcctaa
agcaaaacaagacaaaacaacaacaacaaaaggctatagtgttaatgcaa
gagctaagtctatgctttggcttcttcttgcccgtcaatctcattagctg
aatgtgtggtgatcctcctgagccacaggtgaaaggggcagatttcctct
ctgactcttgttttgacatctgaatagttttcagaaagacatcatggatt
actggctcgatttttttgtcttccaattccatttattatccaatggaaaa
ataagaaacgttatgatagattgtcttgcacgataagtattgcatgaaag
gaagggagtaaaagagcattcatggtttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12601134_12602278
seq2: B6Ng01-033L24.g_66_1195 (reverse)

seq1  GGAAACCATGGATTGCTTCTTTTTAACTCCCTTCCCTTCTATTGCAATAC  50
      ||||||||| || ||| ||||||  |||||||||| |||   ||||||||
seq2  GGAAACCAT-GAATGC-TCTTTT--ACTCCCTTCCTTTC--ATGCAATAC  44

seq1  TTATCTGTGCAAGCAAATCTATTCATAACTGTTTCTTATTTTTTCCATTT  100
      ||||| |||||||  |||||| ||||||| |||||||| |||||||| ||
seq2  TTATC-GTGCAAGACAATCTA-TCATAAC-GTTTCTTA-TTTTTCCA-TT  89

seq1  GTATAATTAATTGGAATTGGAATGACAAAAGATTCGAGCCAGTAATCCAT  150
      | |||| ||| ||||||||||| ||||||| | |||||||||||||||||
seq2  GGATAA-TAAATGGAATTGGAA-GACAAAAAAATCGAGCCAGTAATCCAT  137

seq1  GATGTCTTTCTGAAAACTTATTCAGATGTCAAAACAAGAGTCAGAGAGGA  200
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GATGTCTTTCTGAAAAC-TATTCAGATGTCAAAACAAGAGTCAGAGAGGA  186

seq1  AATCTGCCCCTTTCACCTGTGGCTCAGGAGGATCACCACACATTCAGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCCCCTTTCACCTGTGGCTCAGGAGGATCACCACACATTCAGCTA  236

seq1  ATGAGATTGACGGGCAAGAAGAAGCCAAAGCATAGACTTAGCTCTTGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATTGACGGGCAAGAAGAAGCCAAAGCATAGACTTAGCTCTTGCAT  286

seq1  TAACACTATAGCCTTTTTGTTGTTGTTGTTTTGTCTTGTTTTGCTTTAGG  350
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAACACTATAGCC-TTTTGTTGTTGTTGTTTTGTCTTGTTTTGCTTTAGG  335

seq1  AGCACTCAAGAAGTTTTGTGTAAACACCTTATATTTTATTGGGATTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCAAGAAGTTTTGTGTAAACACCTTATATTTTATTGGGATTATTA  385

seq1  TAAGTAAGAGCTAGATGAGTCACAAGGGTTTAATCTAATGATCTCATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAAGAGCTAGATGAGTCACAAGGGTTTAATCTAATGATCTCATTTT  435

seq1  ATTTCTCAGAAATCCAAGGCATTTAGAGCTGGAAAATCTTTTTTAATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCAGAAATCCAAGGCATTTAGAGCTGGAAAATCTTTTTTAATCAA  485

seq1  AAGATTAGCATCTTTTGTGGCTGAGACTAGATACTACTCAAATACTGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTAGCATCTTTTGTGGCTGAGACTAGATACTACTCAAATACTGACT  535

seq1  GAATGATTAAAGAATTACCATACAAGACAGAGATTGCACATTTGTCACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATTAAAGAATTACCATACAAGACAGAGATTGCACATTTGTCACTA  585

seq1  CATGGTTAGATCCCCCCTCCTCATATTTTCTTGGTGAAGAGGGATTAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTAGATCCCCCCTCCTCATATTTTCTTGGTGAAGAGGGATTAGTA  635

seq1  CTTTGAAAGCTTGAAACCAAGGTTGAATATGTAGCAGACTCAAGGCAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAAGCTTGAAACCAAGGTTGAATATGTAGCAGACTCAAGGCAAGG  685

seq1  AGTACCTTCTGTTGGCTTTGTCTGGTACATCTTGAATCAGGCTCCGCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTTCTGTTGGCTTTGTCTGGTACATCTTGAATCAGGCTCCGCATG  735

seq1  TTGAAATAGAGGCTGGAATATTTCTGTTATATTGAGCATGCCCATTTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATAGAGGCTGGAATATTTCTGTTATATTGAGCATGCCCATTTTGC  785

seq1  TTGTTAGTACTAATTCCTATCTAATAAGAGTCATCTATGCACCATGCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGTACTAATTCCTATCTAATAAGAGTCATCTATGCACCATGCATT  835

seq1  GTATTAGCTCCCAGAGAAAGCATCTATGTGAATCATAGAAATAAAATTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAGCTCCCAGAGAAAGCATCTATGTGAATCATAGAAATAAAATTAT  885

seq1  TCATAGTTCAGAATGACAAATGAAGAGACAATCTCATGATCAAACAGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTTCAGAATGACAAATGAAGAGACAATCTCATGATCAAACAGAAT  935

seq1  CCCACATATGCTGATAATTACGTGTCTCCTATTTTTGTTAATTCTTTCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATATGCTGATAATTACGTGTCTCCTATTTTTGTTAATTCTTTCAT  985

seq1  TCAAGAACAATTGAGGGTAGGTTGTGCTCTTACCAAAGCATGAGAGCTAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAACAATTGAGGGTAGGTTGTGCTCTTACCAAAGCATGAGAGCTAA  1035

seq1  ACAGTGATGCTATGGTGACTGACATATTCCTCCCACTCATTCTGTAAGCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGATGCTATGGTGACTGACATATTCCTCCCACTCATTCTGTAAGCA  1085

seq1  CTGTTCCATAAATAATTAGATAGTTTGAGAATTAAGACTGAATTC  1145
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCATAAATAATTAGATAGTTTGAGAATTAAGACTGAATTC  1130