BAC Information

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BAC

Clone NameB6Ng01-034L07
Chromosome11 (Build37)
Map Location 8,250,438 - 8,438,912
singlet/doubletdoublet
Overlap geneLOC665380, Tns3
Upstream genenone
Downstream geneLOC638720, Pkd1l1, LOC624800, Hus1, Sunc1, OTTMUSG00000005148, Upp1, LOC626887, LOC100041469, Abca13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034L07.bB6Ng01-034L07.g
ACCDH863379DH863380
length962803
definitionDH863379|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L07, 5' end.DH863380|Mus musculus domesticus DNA, BAC clone: B6Ng01-034L07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,437,944 - 8,438,912)(8,250,438 - 8,251,075)
sequence
gaattcctaaacatgtcatttttttttcccaatggagaacttttctacct
atctgatttgttattgtttgtttgttttttgagacagggtctcactgtgt
agacccacctggcctagaactcagacctttgcctgcctctgccctccgag
tgcttcgattaaaggcacgtaccactgtgtctggctgcctatgagatttt
aaaagatacctttgttttcagtaagtcttatttcatggttttaggcagct
cagtgaccctaggatgccccacagtgaggtttcccagaagggtctgtaaa
ttctactctgaacattggggctggtgtctgaaggtcaggtaggctgttag
aaagtagattgactttctgtgaagttacatgaagcccaaggccctacaca
cccttcccagccaccaaccctgccccgttctcaactccaggctttctttg
aagctgcttagcagtgtcacatattatacttccaagacttccttccttct
gtgcacattctaggctttttccgaagggtcctgcggctggggcctgcagc
ccattcctctccctgtgagacagtggtacatctaagtatcacacccttag
ataatgtagttcagacaggagttcagcatggctcctgctttgaactgagt
gcactcatgcagaaagacggtgcatggacaggtacagctcctttgtggaa
gaaggtcactgaccgacgtaggatgttgcaccccagtcattcatccatga
ggggctgggcataccactgacctgacatacttacttattcttctcacccc
tctctcctcctccctgcttcccagtgctgaccaggcactggacaagtttg
cattgaagaagttttatgatgacaaaatttcagctttatggagccttcct
aagcggttagtatctatctatccttgggcagatgatattctctgaacttc
tctctgcacaac

gaattcaacttctgacactttcctttaaaaaaagggaagaaatgagtgag
tgttggtctccgagaatttggcactggcactctttcccaaaagtttctta
aagctagacctgggtggaaattaccttcttgaagtgggaatttgtaatgt
ttgtctggaaattgtctaatgagaggatgtcttactgaagcagacacaca
tattgtttttctggcagctgcctggtaaaagggtatgtgatgttttgctg
gagtggacacttgagaggatgtgtgatgtttggaaagagtatcagtagaa
tccaacagacagtggatgacattcttgcattggttcgccttgcaactctt
ttgctggtcttcatcaggctttgctaaggctgttcttcactgacaacact
ctttaattggttcagcttgctttcttctctaatcttcacttgtcatgact
ttgtagaaagaaatatgccaaagaatttcgacagaggataggtgtccgcc
ggcctgggagggctttgcctgagcatctgctggagaaatcttggataccg
gactccactgagactactcttcacaggtgagagtgtggactacaaaagct
aacagctttctgggacaggcgggagccacagagcttctgaggcagccccc
tttttcgggctccagacatccgggcaccatccctgccagaggagaggtgt
ccaacccggcctggggagggctttgcctgagcatctgcaggagacatttt
tggcttctgggactccaccgagactagtcagcacaggtgagagtgcggac
aac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_8437944_8438912
seq2: B6Ng01-034L07.b_45_1006 (reverse)

seq1  GTTGTGCAGAGAGAAGTTGTCAGAGAATATTCATCTGGCCCCAAGGATAG  50
      |||||||||||||||||  |||||||||| |||||||  |||||||||||
seq2  GTTGTGCAGAGAGAAGT--TCAGAGAATA-TCATCTG--CCCAAGGATAG  45

seq1  ATAGATACATACCGCTTCTGGGAGGGCTCCATTAAAGCTGAAATTTTGTC  100
      ||||||||  ||||||  | ||| ||||||| ||||||||||||||||||
seq2  ATAGATACTAACCGCT--TAGGAAGGCTCCA-TAAAGCTGAAATTTTGTC  92

seq1  ATCATAAAACTTCTTCATTGCAAACCTGTCCAGTGCCTGGTCAGCACTGG  150
      ||||||||||||||||| ||||||| |||||||||||||||||||||| |
seq2  ATCATAAAACTTCTTCAATGCAAACTTGTCCAGTGCCTGGTCAGCACT-G  141

seq1  GGAAGCAGGGAGGGAGAGAGAGGGGTGAGAAGAATAAGTAAGTATGTCAG  200
      |||||||||||||  |||||||||||||||||||||||||||||||||||
seq2  GGAAGCAGGGAGGAGGAGAGAGGGGTGAGAAGAATAAGTAAGTATGTCAG  191

seq1  GTCAGTGGTATGCCCAGCCCCTCATGGATGAATGACTGGGGTGC-ACATC  249
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTCAGTGGTATGCCCAGCCCCTCATGGATGAATGACTGGGGTGCAACATC  241

seq1  CTACGTCGGTCAGTGACCTTCTTCCAC-AAGGAGCTGTACCTGTCCATGC  298
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTACGTCGGTCAGTGACCTTCTTCCACAAAGGAGCTGTACCTGTCCATGC  291

seq1  ACCGTCTTTCTGCATGAGTGCACTCAGTTCAAAGCAGGAGCCATGCTGAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCTTTCTGCATGAGTGCACTCAGTTCAAAGCAGGAGCCATGCTGAA  341

seq1  CTCCTGTCTGAACTACATTATCTAAGGGTGTGATACTTAGATGTACCACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTCTGAACTACATTATCTAAGGGTGTGATACTTAGATGTACCACT  391

seq1  GTCTCACAGGGAGAGGAATGGGCTGCAGGCCCCAGCCGCAGGACCCTTCG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACAGGGAGAGGAATGGGCTGCAGGCCCCAGCCGCAGGACCCTTCG  441

seq1  GAAAAAGCCTAGAATGTGCACAGAAGGAAGGAAGTCTTGGAAGTATAATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGCCTAGAATGTGCACAGAAGGAAGGAAGTCTTGGAAGTATAATA  491

seq1  TGTGACACTGCTAAGCAGCTTCAAAGAAAGCCTGGAGTTGAGAACGGGGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACACTGCTAAGCAGCTTCAAAGAAAGCCTGGAGTTGAGAACGGGGC  541

seq1  AGGGTTGGTGGCTGGGAAGGGTGTGTAGGGCCTTGGGCTTCATGTAACTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGGTGGCTGGGAAGGGTGTGTAGGGCCTTGGGCTTCATGTAACTT  591

seq1  CACAGAAAGTCAATCTACTTTCTAACAGCCTACCTGACCTTCAGACACCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAGTCAATCTACTTTCTAACAGCCTACCTGACCTTCAGACACCA  641

seq1  GCCCCAATGTTCAGAGTAGAATTTACAGACCCTTCTGGGAAACCTCACTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAATGTTCAGAGTAGAATTTACAGACCCTTCTGGGAAACCTCACTG  691

seq1  TGGGGCATCCTAGGGTCACTGAGCTGCCTAAAACCATGAAATAAGACTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCATCCTAGGGTCACTGAGCTGCCTAAAACCATGAAATAAGACTTA  741

seq1  CTGAAAACAAAGGTATCTTTTAAAATCTCATAGGCAGCCAGACACAGTGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAACAAAGGTATCTTTTAAAATCTCATAGGCAGCCAGACACAGTGG  791

seq1  TACGTGCCTTTAATCGAAGCACTCGGAGGGCAGAGGCAGGCAAAGGTCTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTGCCTTTAATCGAAGCACTCGGAGGGCAGAGGCAGGCAAAGGTCTG  841

seq1  AGTTCTAGGCCAGGTGGGTCTACACAGTGAGACCCTGTCTCAAAAAACAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAGGCCAGGTGGGTCTACACAGTGAGACCCTGTCTCAAAAAACAA  891

seq1  ACAAACAATAACAAATCAGATAGGTAGAAAAGTTCTCCATTGGGAAAAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAATAACAAATCAGATAGGTAGAAAAGTTCTCCATTGGGAAAAAA  941

seq1  AAATGACATGTTTAGGAATTC  969
      |||||||||||||||||||||
seq2  AAATGACATGTTTAGGAATTC  962


seq1: chr11_8250438_8251075
seq2: B6Ng01-034L07.g_69_707

seq1  GAATTCAACCTCTGACACTTTCCTTTAAAAAAAGGGAAGAAATGAGTGAG  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTCTGACACTTTCCTTTAAAAAAAGGGAAGAAATGAGTGAG  50

seq1  TGTTGGTCTCCGAGAATTTGGCACTGGCACTCTTTCCCAAAAGTTTCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTCTCCGAGAATTTGGCACTGGCACTCTTTCCCAAAAGTTTCTTA  100

seq1  AAGCTAGACCTGGGTGGAAATTACCTTCTTGAAGTGGGAATTTGTAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGACCTGGGTGGAAATTACCTTCTTGAAGTGGGAATTTGTAATGT  150

seq1  TTGTCTGGAAATTGTCTAATGAGAGGATGTCTTACTGAAGCAGACACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGGAAATTGTCTAATGAGAGGATGTCTTACTGAAGCAGACACACA  200

seq1  TATTGTTTTTCTGGCAGCTGCCTGGTAAAAGGGTATGTGATGTTTTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTTTTCTGGCAGCTGCCTGGTAAAAGGGTATGTGATGTTTTGCTG  250

seq1  GAGTGGACACTTGAGAGGATGTGTGATGTTTGGAAAGAGTATCAGTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGACACTTGAGAGGATGTGTGATGTTTGGAAAGAGTATCAGTAGAA  300

seq1  TCCAACAGACAGTGGATGACATTCTTGCATTGGTTCGCCTTGCAACTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACAGACAGTGGATGACATTCTTGCATTGGTTCGCCTTGCAACTCTT  350

seq1  TTGCTGGTCTTCATCAGGCTTTGCTAAGGCTGTTCTTCACTGACAACACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGTCTTCATCAGGCTTTGCTAAGGCTGTTCTTCACTGACAACACT  400

seq1  CTTTAATTGGTTCAGCTTGCTTTCTTCTCTAATCTTCACTTGTCATGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATTGGTTCAGCTTGCTTTCTTCTCTAATCTTCACTTGTCATGACT  450

seq1  TTGTAGAAAGAAATATGCCAAAGAATTTCGACAGAGGATAGGTGTCCGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAAAGAAATATGCCAAAGAATTTCGACAGAGGATAGGTGTCCGCC  500

seq1  GGCCTGGGAGGGCTTTGCCTGAGCATCTGCTGGAGAAATCTTGGATACCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGGAGGGCTTTGCCTGAGCATCTGCTGGAGAAATCTTGGATACCG  550

seq1  GACTCCACTGAGACTACTCTTCACAGGTGAGAGTGTGGACTACAAAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCACTGAGACTACTCTTCACAGGTGAGAGTGTGGACTACAAAAGCT  600

seq1  AACAGC-TTCTGGGACAGGCGGGAGCCACAGAGCTTCTG  638
      |||||| ||||||||||||||||||||||||||||||||
seq2  AACAGCTTTCTGGGACAGGCGGGAGCCACAGAGCTTCTG  639


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