BAC Information

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BAC

Clone NameB6Ng01-037H15
Chromosome16 (Build37)11 (Build37)
Map Location 13,664,133 - 13,664,34578,339,035 - 78,339,817
singlet/doubletsingletsinglet
Overlap geneParn
Upstream geneEG622509, LOC622553, Ercc4, Gt4-1, Mkl2
Downstream geneLOC100043196, 3110001I22Rik, Pla2g10, A930007A09Rik, LOC622757, Rrn3, Ntan1, Pdxdc1, Mpv17l, Ifitm7, 2900011O08Rik, 4921513D23Rik, Nde1, Myh11, 0610037P05Rik, Abcc1, Gm1758
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037H15.bB6Ng01-037H15.g
ACCDH865327DH865328
length292784
definitionDH865327|Mus musculus domesticus DNA, BAC clone: B6Ng01-037H15, 5' end.DH865328|Mus musculus domesticus DNA, BAC clone: B6Ng01-037H15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(13,664,133 - 13,664,345)(78,339,035 - 78,339,817)
sequence
gaattccataggattttgatgggtcctttataagtacaacaagttcttta
actactgagccattgagatcagagatagatagatagatagataggtagat
agatagatagatagatagatagatagatagatagatagatagatagatag
agatagagagatagagagatagattgagatagggcttccatgtgtaggcc
tggctgtcctggatctcactctgtagaccaggcaggtctcaaacccagag
atctgcctgcctctgcctcccaagtgctgggattaagagcgt
gaattccacctggagtgaacagaaaagacagaatgaggtttcatttagtg
aggaaacacctaacgtaggagtcaggtggctgcccggctaacaagggaag
catgagggggcatgagagtatagatcgacacctctagctaccctacagca
tcccacaactgaagactagtatgcatgggtatatccaggtataagcacaa
ctccatgggcttggtgccagatgaagtctgagctttctgggctgtagttc
ctgtttgtgtaaagtggtgccaatagctacctttggttttggtttttttt
ttgagacagggtctccttatagttcaagctgccccagaatcagaatccta
ccttagccttctaagcacggtgattccaaccaagtacaccaacctgagct
aacacctctgaagagttatcaacatagcaggcaagacatacatcctttag
tccagtgactaccccagcacagtaaacaaccaaaatatgtaatagaaagc
agctgcttagccaggcagggtgatgcccgtctatcatccctgctacctgg
gggggctgaggtcaggaggatggagagttcaaagccagcccacctagtaa
aatcctgtctcacagaggggtggaggagcagaggatagctcagtggggta
aaggcacttgcatcaatcctgacaacttgagtttggtcctaggacagaac
tagtagaacccaaatgggaagaatgttccaagctgtcctgtctttcactc
acagggcatgggatgagcacacccaccacacaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_13664133_13664345
seq2: B6Ng01-037H15.b_123_334 (reverse)

seq1  ACGCTTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGGGGATTTCTGAGT  50
      ||||| |||||||||||||||||||||||||||||||  ||| |||| ||
seq2  ACGCTCTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATCTCTGGGT  50

seq1  TCGAGGCCAACCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACA  100
      | ||| ||  |||||||||||||||||| ||||||||||||||| |||||
seq2  TTGAGACCTGCCTGGTCTACAGAGTGAGATCCAGGACAGCCAGGCCTACA  100

seq1  CAGAGAAACCCTGTCTCGAAAAAACAAAACCAATAAATAAATA---ATAT  147
      ||  ||| |||| ||||    || | |   |  ||  |   ||    |||
seq2  CATGGAAGCCCTATCTC----AATCTATCTCTCTATCTCTCTATCTCTAT  146

seq1  -TAACTATTTATTAATAAATACTAAAGTTC-AT-GATCTA-ATTTCTATC  193
       || |||| |||  ||  || |||    || ||  |||||  | ||||||
seq2  CTATCTATCTATCTATCTAT-CTATCTATCTATCTATCTATCTATCTATC  195

seq1  TACCTATCTATAGTCTATCT  213
      ||||||||||   |||||||
seq2  TACCTATCTA---TCTATCT  212

seq1: chr11_78339035_78339817
seq2: B6Ng01-037H15.g_67_849

seq1  GAATTCCACCTGGAGTGAACAGAAAAGACAGAATGAGGTTTCATTTAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTGGAGTGAACAGAAAAGACAGAATGAGGTTTCATTTAGTG  50

seq1  AGGAAACACCTAACGTAGGAGTCAGGTGGCTGCCCGGCTAACAAGGGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACACCTAACGTAGGAGTCAGGTGGCTGCCCGGCTAACAAGGGAAG  100

seq1  CATGAGGGGGCATGAGAGTATAGATCGACACCTCTAGCTACCCTACAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGGGGCATGAGAGTATAGATCGACACCTCTAGCTACCCTACAGCA  150

seq1  TCCCACAACTGAAGACTAGTATGCATGGGTATATCCAGGTATAAGCACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACAACTGAAGACTAGTATGCATGGGTATATCCAGGTATAAGCACAA  200

seq1  CTCCATGGGCTTGGTGCCAGATGAAGTCTGAGCTTTCTGGGCTGTAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGGGCTTGGTGCCAGATGAAGTCTGAGCTTTCTGGGCTGTAGTTC  250

seq1  CTGTTTGTGTAAAGTGGTGCCAATAGCTACCTTTGGTTTTGGTTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGTGTAAAGTGGTGCCAATAGCTACCTTTGGTTTTGGTTTTTTTT  300

seq1  TTGAGACAGGGTCTCCTTATAGTTCAAGCTGCCCCAGAATCAGAATCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACAGGGTCTCCTTATAGTTCAAGCTGCCCCAGAATCAGAATCCTA  350

seq1  CCTTAGCCTTCTAAGCACGGTGATTCCAACCAAGTACACCAACCTGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGCCTTCTAAGCACGGTGATTCCAACCAAGTACACCAACCTGAGCT  400

seq1  AACACCTCTGAAGAGTTATCAACATAGCAGGCAAGACATACATCCTTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCTCTGAAGAGTTATCAACATAGCAGGCAAGACATACATCCTTTAG  450

seq1  TCCAGTGACTACCCCAGCACAGTAAACAACCAAAATATGTAATAGAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGACTACCCCAGCACAGTAAACAACCAAAATATGTAATAGAAAGC  500

seq1  AGCTGCTTAGCCAGGCAGGGTGATGCCCGTCTATCATCCCTGCTACCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTTAGCCAGGCAGGGTGATGCCCGTCTATCATCCCTGCTACCTGG  550

seq1  GGGGGCTGAGGTCAGGAGGATGGAGAGTTCAAAGCCAGCCCACCTAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCTGAGGTCAGGAGGATGGAGAGTTCAAAGCCAGCCCACCTAGTAA  600

seq1  AATCCTGTCTCAGCAGAGGGGTGGAGGAGCAGAGGATAGCTCAGT-GGGT  649
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  AATCCTGTCTCA-CAGAGGGGTGGAGGAGCAGAGGATAGCTCAGTGGGGT  649

seq1  AAAGGCACTTGCATCAATCCTGACAACTTGAGTTTGGTCCTAGGACAGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCACTTGCATCAATCCTGACAACTTGAGTTTGGTCCTAGGACAGAA  699

seq1  CTAGTAGAACCCAAATGGAGAGAATGTTCCAAGCTGTCCTGTCTTTCACT  749
      ||||||||||||||||||  ||||||||||||||||||||||||||||||
seq2  CTAGTAGAACCCAAATGGGAAGAATGTTCCAAGCTGTCCTGTCTTTCACT  749

seq1  CACAGGCCATGGCA-GAGCACACCCACCAACACAA  783
      |||||| ||||| | ||||||||||||| ||||||
seq2  CACAGGGCATGGGATGAGCACACCCACC-ACACAA  783