BAC Information

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BAC

Clone NameB6Ng01-037L20
Chromosome11 (Build37)
Map Location 60,720,037 - 60,942,595
singlet/doubletdoublet
Overlap geneGtlf3b, Map2k3, Kcnj12
Upstream geneMed9, Rasd1, Pemt, Rai1, Srebf1, Tom1l2, LOC667892, Lrrc48, Atpaf2, 4933439F18Rik, LOC674310, Drg2, Myo15, Alkbh5, LOC100042448, LOC624403, LOC624424, OTTMUSG00000007757, LOC668206, Llgl1, Flii, Smcr7, Top3a, LOC100042517, Smcr8, Shmt1, LOC625958, LOC637900, Dhrs7b, Tmem11
Downstream geneLOC668228, Tnfrsf13b, Usp22, LOC668239, Aldh3a1, Aldh3a2, 4933429E10Rik, 1300013J15Rik, LOC100042602, LOC626150, Zfp179, Mfap4, Mapk7, 3110043A19Rik, Eppb9, Epn2, Grap, Slc5a10, 2310040C09Rik, Prpsap2, Ulk2, Akap10, D630015H07, LOC626325, LOC100041558, Specc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037L20.bB6Ng01-037L20.g
ACCDH865510DH865511
length695438
definitionDH865510|Mus musculus domesticus DNA, BAC clone: B6Ng01-037L20, 5' end.DH865511|Mus musculus domesticus DNA, BAC clone: B6Ng01-037L20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,720,037 - 60,720,731)(60,942,152 - 60,942,595)
sequence
gaattctgaagtgcttgggagaggcaggtggagatggaggccactgactt
ggacactcatccactatgcatcaccagggctaactaagcaagtactgcat
gccaagtcctagtcccaaggcggagtcaggctgtggggccccaggctcag
aatagtggccacctgccacagggcctagcaccataagcagcaggtatcta
aagctctcccactgccacatgcaaactcttggacagatgggcctgtgaag
ctatgctgtggtctagaagaaaatcagagttaaccacaggctatcttctc
tgtaaggggagggcgagagctgcatcctggtctgctacccatcttacctt
ggccaggtgcttggcaatgccacgcccacggtaagcatctgggacctctg
tgtgttgcaggtccacgatccgcttgcccacatactcatagagcaggaca
gctcggtcatgacatcctggagcagagatagaaacagctcaagtacgaac
tccagaggccctcggagcttcgttattcctggcaacccccggggtggagg
acagggtgaaggatagaatccggaaccagactaccaatgtgctataagag
ctgaatgttagccgcgcagtggtggtgcacgcctttaatcccagtacttg
ggaggcaaaggcaggtggatttctgagttcgaggccagcctggtc
ttgcgccttttaaaaactggatgcagtttgggatagggggtggcgcacgc
ctttcatcccagcccttgggaggcagaggcaggaggaactctgagttcaa
ggtcagtctcatctacagagagttccagaacagccagggctatacagaga
aaccctatcttcttaaaaaaacaaaacaaacaaaaaacaaagccaaaaac
ttggacacaggacatgtttgactattattgtgaatacctttaaagaggaa
gggaagactcggctttcaataccagtcaggtgcctgttgtgagcgagcaa
tcctacgctgcaatagaacaaaacaagacagttttaagaacgcaaggccc
agctgggcgtggtggagcacgcctttaatctttgcactcttgaggcatag
acaggcagatttctgagttcgaggccagcctgttcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_60720037_60720731
seq2: B6Ng01-037L20.b_46_740

seq1  GAATTCTGAAGTGCTTGGGAGAGGCAGGTGGAGATGGAGGCCACTGACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAGTGCTTGGGAGAGGCAGGTGGAGATGGAGGCCACTGACTT  50

seq1  GGACACTCATCCACTATGCATCACCAGGGCTAACTAAGCAAGTACTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTCATCCACTATGCATCACCAGGGCTAACTAAGCAAGTACTGCAT  100

seq1  GCCAAGTCCTAGTCCCAAGGCGGAGTCAGGCTGTGGGGCCCCAGGCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTCCTAGTCCCAAGGCGGAGTCAGGCTGTGGGGCCCCAGGCTCAG  150

seq1  AATAGTGGCCACCTGCCACAGGGCCTAGCACCATAAGCAGCAGGTATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGGCCACCTGCCACAGGGCCTAGCACCATAAGCAGCAGGTATCTA  200

seq1  AAGCTCTCCCACTGCCACATGCAAACTCTTGGACAGATGGGCCTGTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTCCCACTGCCACATGCAAACTCTTGGACAGATGGGCCTGTGAAG  250

seq1  CTATGCTGTGGTCTAGAAGAAAATCAGAGTTAACCACAGGCTATCTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCTGTGGTCTAGAAGAAAATCAGAGTTAACCACAGGCTATCTTCTC  300

seq1  TGTAAGGGGAGGGCGAGAGCTGCATCCTGGTCTGCTACCCATCTTACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGGGGAGGGCGAGAGCTGCATCCTGGTCTGCTACCCATCTTACCTT  350

seq1  GGCCAGGTGCTTGGCAATGCCACGCCCACGGTAAGCATCTGGGACCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGTGCTTGGCAATGCCACGCCCACGGTAAGCATCTGGGACCTCTG  400

seq1  TGTGTTGCAGGTCCACGATCCGCTTGCCCACATACTCATAGAGCAGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGCAGGTCCACGATCCGCTTGCCCACATACTCATAGAGCAGGACA  450

seq1  GCTCGGTCATGACATCCTGGAGCAGAGATAGAAACAGCTCAAGTACGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGGTCATGACATCCTGGAGCAGAGATAGAAACAGCTCAAGTACGAAC  500

seq1  TCCAGAGGCCCTCGGAGCTTCGTTATTCCTGGCAACCCCCGGGGTGGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGGCCCTCGGAGCTTCGTTATTCCTGGCAACCCCCGGGGTGGAGG  550

seq1  ACAGGGTGAAGGATAGAATCCGGAACCAGACTACCAATGTGCTATAAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTGAAGGATAGAATCCGGAACCAGACTACCAATGTGCTATAAGAG  600

seq1  CTGAATGTTAGCCGCGCAGTGGTGGTGCACGCCTTTAATCCCAGTACTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGTTAGCCGCGCAGTGGTGGTGCACGCCTTTAATCCCAGTACTTG  650

seq1  GGAGGCAAAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTC  695
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAAAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTC  695

seq1: chr11_60942152_60942595
seq2: B6Ng01-037L20.g_69_512 (reverse)

seq1  GTTGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGTCTCTGCCTCCTG  50
      ||||| |||||||||||||||||||||||||||||||||| ||||||  |
seq2  GTTGAACAGGCTGGCCTCGAACTCAGAAATCTGCCTGTCTATGCCTCAAG  50

seq1  AGTGCTGGGATTAAAGGCGTGCTCCACCACGCCCAGCTGGGCCTTGCGTT  100
      |||||   ||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAAAGATTAAAGGCGTGCTCCACCACGCCCAGCTGGGCCTTGCGTT  100

seq1  CTTAAAACTGTCTTGTTTTGTTCTATTGCAGCGTAGGATTGCTCGCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAACTGTCTTGTTTTGTTCTATTGCAGCGTAGGATTGCTCGCTCAC  150

seq1  AACAGGCACCTGACTGGTATTGAAAGCCGAGTCTTCCCTTCCTCTTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCACCTGACTGGTATTGAAAGCCGAGTCTTCCCTTCCTCTTTAAA  200

seq1  GGTATTCACAATAATAGTCAAACATGTCCTGTGTCCAAGTTTTTGGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCACAATAATAGTCAAACATGTCCTGTGTCCAAGTTTTTGGCTTT  250

seq1  GTTTTTTGTTTGTTTTGTTTTTTTAAGAAGATAGGGTTTCTCTGTATAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGTTTGTTTTGTTTTTTTAAGAAGATAGGGTTTCTCTGTATAGC  300

seq1  CCTGGCTGTTCTGGAACTCTCTGTAGATGAGACTGACCTTGAACTCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGTTCTGGAACTCTCTGTAGATGAGACTGACCTTGAACTCAGAG  350

seq1  TTCCTCCTGCCTCTGCCTCCCAAGGGCTGGGATGAAAGGCGTGCGCCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTGCCTCTGCCTCCCAAGGGCTGGGATGAAAGGCGTGCGCCACC  400

seq1  CCCTATCCCAAACTGCATCCAGTTTTTAAAAGGCGCAAGAATTC  444
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATCCCAAACTGCATCCAGTTTTTAAAAGGCGCAAGAATTC  444