MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-038J24
Chromosome	11 (Build37)
Map Location	15,242,335 - 15,243,418
singlet/doublet	singlet
Overlap gene	none
Upstream gene	1700046C09Rik, 1700054H16Rik, LOC100042542, LOC100041673, LOC432537
Downstream gene	LOC665660, Vstm2
Link	Open Mouse BAC browser

Click to get alignment info.

name	1700046C09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73307 MGI:1920557
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	1700054H16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432536 MGI:1920677
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	LOC100042542 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042542
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100041673 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041673
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC432537 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:432537
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 4 Proteins pseudo : _no_value

name	LOC665660 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665660
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Vstm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211739 MGI:2384826
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700046C09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261659 GeneID:73307 MGI:1920557
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700046C09 gene transcript_id : XM_001479083.1

name	Vstm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122404 GeneID:211739 MGI:2384826
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : V-set and transmembrane domain containing 2 transcript_id : NM_145967.1

name	1700046C09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261660 GeneID:73307 MGI:1920557
definition	codon_start : 1 product : hypothetical protein LOC73307 protein_id : XP_001479133.1

name	Vstm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122405 CCDS:CCDS24441.1 GeneID:211739 MGI:2384826
definition	codon_start : 1 note : novel transcript product : V-set and transmembrane domain containing 2 protein_id : NP_666079.1

name	LOC100042542 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042542
definition	number : 1 pseudo : _no_value

name	LOC100041673 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041673
definition	number : 1 pseudo : _no_value

name	LOC100041673 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041673
definition	number : 2 pseudo : _no_value

name	LOC100041673 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041673
definition	number : 3 pseudo : _no_value

name	LOC665660 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665660
definition	number : 1 pseudo : _no_value

name	1700054H16Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:142347697 GeneID:432536 MGI:1920677
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700054H16 gene pseudo : _no_value transcript_id : NR_002893.2

name	LOC432537 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261617 GeneID:432537
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 4 Proteins product : similar to Elongation factor 2 (EF-2) pseudo : _no_value transcript_id : XR_032931.1

clone name	MSMg01-435C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439A20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-348K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213J15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-517C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233J15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-474J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046G03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-038J24.b	B6Ng01-038J24.g
ACC	DH866134	DH866135
length	1,117	1,072
definition	DH866134\|Mus musculus domesticus DNA, BAC clone: B6Ng01-038J24, 5' end.	DH866135\|Mus musculus domesticus DNA, BAC clone: B6Ng01-038J24, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgcttagctctgtaccacattttttaatagggtttttggttt ttctggagtcaaaattcttgagttctttatctttctgtatggattgtaat aattggatattaggcctctatcagatttaggattggtaaagatcttttcc caatttgttggttcctgttttgtcttattgacagtttactttgccttaca gaagtttggaatgttatgaggtcccattttttgattcttgatcttactgc acaagccattaattagtgttctgttcaggaatttttcccctgtgcccata tctttgaggctcttccccacattctcctctgtaagtttcagtgtctctgg tttaatatggagttccttgaaccactaagacttgagatttgtacaaggag ataagaatggattaagtcacattcttctacatgctaactgccagttaagt tggcaccatttgttgaaaatgctgtccttttcctactggatggttttacc tcctttgtcagaagatcaagtgaccatagttgtttgggttcatttctggg tcttcaattctgttccatttatctacctgcctgtcagagtaccagtacca tgcagtttttatcacaattgctctgtagtacagcttgagttcaggaatgg agattccaccacaggttcttttttttgttgttgttgagaatagttttttt ttttttttttttgttatcacagaagaatttgcaaatttccctttctaact ctgtgaagaatttagttgaaattttgattgggattgcattgaatctgtag atgacttttggcaagacagccattttaactatattaatcctgccagtccc tgagtatgagagatctttccacctacagagatctttgatttctttcttca gagacttgaagttcttatcataaagatctttcacttccttagtagaatca aagcaaggtattttaagttatttatgactattttgaaggtgctattcctt aatttctggtctcatgctgttaaccttgtggtaaggagggcactaattgt gagttatttaatccgctacttcactgaggattacctaaattagaagtctt gtgagaatttggagcac	gaattcttatccctcccttctcaatatagctataattcccctaaagctcc atgtttcaattggcattgaaaatattttctaaaattactttacaatatag aacttatttctttaaaaagattttggatgaattttcaactttctcctccg tccaaaaaaaaaaaaaaaaaaaaaaatcttaaggggttttgactgaaatt ctgttgaaattcaccggtcactttgggagaaatggtatatcaacataacc aagattttggttaatagtataaagccagctcttaattaattttgccctgt agttttttatctatattttatagggtttgccatatcagtattaaattgtc taaatgtactcatgctattctaatggatgttaacatatacaaggcatcat tcacagctctgtttggtatcttataatatttgaaaacatgtttagttttc tagtaggcatttcgatgcttccatatttcttttgtaatactatattttca aggaatttaaatggaatagtcttagaatttaagttttatcaaaataatta taataatctatttaaggtgtacttccagggcataaattctagctacaagt gctatttaaatatcctgggctctattcatgtgatgtaataagaaagaagt tactgcatgatcaataatggcttatgctgcttaggatatccatataattc caggcttgaaaatgaaattgtattatctctcaaatctcttttacctaagt ggcattttgtagtttttagattgctttcacattcttacctgatttgattc ttacattaataggccaagacatagttctttatcattttttttattagaag aacaacagtcaagtcagaataccatgttctacatgctgtcacagtctagt gagaaacaacaatcctggcctgactctaatgttctgttcatggcatctaa gtctactggggtgtatgacagcattgcatgaaaatgtacacattgctctt gccagaaaactgtctgtaatggtactgtttttttcatattgagactctta gcatcgtggtggcaattttcat
quality values	Open. Hide. 50 47 24 32 61 61 61 61 61 61 61 61 61 49 61 61 61 61 61 61 61 61 61 59 32 52 49 59 59 59 59 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 55 44 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 44 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 44 55 61 61 61 61 44 44 61 61 61 61 59 59 59 61 59 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 55 44 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 53 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 53 61 61 53 61 39 61 50 61 61 61 61 61 47 61 53 61 61 61 61 61 61 53 61 61 61 61 61 50 61 53 50 61 61 61 53 61 61 61 61 53 61 53 61 61 34 61 61 61 53 61 61 43 61 53 53 38 53 57 57 50 53 53 53 53 53 57 57 57 53 57 57 57 57 53 52 52 57 38 53 53 38 47 43 50 53 53 33 47 36 57 57 47 57 53 50 57 57 57 57 47 53 45 52 53 38 57 53 57 57 53 53 45 53 57 52 53 53 52 52 50 50 53 53 57 53 57 53 45 53 47 45 45 38 57 53 52 36 57 57 53 45 41 31 50 45 46 30 47 41 28 53 50 42 52 38 53 53 50 57 41 33 33 25 41 57 52 34 52 52 21 53 52 33 57 50 57 42 57 53 35 42 40 34 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 44 43 16 25 30 35 37 27 40 27 34 57 41 24 43 16 16 46 25 26 37 19 52 52 29 57 44 30 44 41 30 45 35 30 34 29 41 36 40 40 35 45 28 40 40 53 25 32 37 26 57 41 37 30 39 43 31 30 45 46 30 46 46 47 29 30 20 48 32 46 44 20 11 31 30 34 36 39 47 30 29 41 27 29 29 31 22 39 25 37 20 28 39 28 34 51 51 47 29 25 21 31 39 28 39 28 28 29 25 29 24 28 37 46 30 26 29 27 24 25 24 24 23 41 28 29 20 19 32 28 36 14 23 16 28 34 29 43 30 23 29 27 29 34 27 21 23 29 17 40 18 28 22 29 26 51 36 26 19 14 16 32 28 21 22 10 27 29 30 22 16 15 14 51 32 28 14 11 51 29 17 14 51 28 23 20 19 18 15 13 41 23 34 20 21 23 21 22 21 19 25 24 25 25 12 19 10 14 8 14 12 5 5 9 18 21 21 23 51 28 15 12 11 28 25 22 33 22 20 29 17 32 21 12 13 29 14 17 16 42 28 20 13 10 12 19 29 5 5 8 30 17 12 5 14 13 23 6 10 7 35 23 10 6 9 23 5 4 8 4 10 8 24 23 17 6 4 8 9 29 18 13 14 28 28 8 13 14 5 15 20 8 37 6 8 5 14 20 13 17 6 7 7 6 17 13 17 9 13 5 12 14 13 6 7 5 14 6 11 8 6 8 5 4 3 5 3 15 14 24 10 23 5 7 7 17 4 5 12 7 4 3 4 3 3 4 25 19 13 4 6 7 4 4 11 5 9 5 9 24 15 11 24 11 12 10 5 4 4 4 6 3 8 19 7 6 16 6 5 18 9 12 8 7 3 7 9 7 13 5 7 8 6 4 11 9 15 21 6 17 17 8 4 5 4 4	Open. Hide. 61 61 61 59 59 59 52 52 49 59 43 55 61 59 61 61 61 61 61 61 61 59 43 61 61 61 61 59 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 59 61 61 61 61 61 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 59 55 61 61 61 61 61 61 55 55 59 59 61 61 59 55 55 59 61 59 61 61 59 59 59 44 36 44 28 30 28 41 35 36 44 55 55 55 55 59 59 44 52 49 52 55 50 52 49 59 59 44 43 43 52 52 50 59 59 52 49 49 45 43 49 49 59 50 35 52 44 52 50 59 59 59 59 38 49 34 49 41 36 43 59 52 36 52 52 49 52 52 52 59 59 52 52 50 43 55 43 38 45 29 44 49 49 52 49 59 59 52 52 52 52 49 52 39 43 44 49 52 52 49 59 59 55 44 45 49 52 52 49 45 49 59 59 59 59 59 59 61 59 59 55 59 59 59 52 59 39 59 52 59 61 61 59 59 59 59 59 59 50 52 59 52 59 59 59 52 59 52 37 43 61 61 52 59 59 55 59 59 49 59 52 59 52 52 43 52 59 59 59 59 59 59 59 59 59 52 59 59 59 59 59 59 61 52 41 52 52 50 43 52 59 59 52 52 59 59 52 49 52 52 52 55 59 59 49 59 52 43 52 59 52 43 52 49 52 49 55 52 55 55 61 52 52 55 55 52 55 50 41 49 52 49 43 43 52 49 52 52 52 55 52 61 55 49 52 52 52 52 49 52 43 49 49 49 55 55 55 50 50 55 55 55 55 55 50 55 55 55 55 55 61 55 55 61 55 55 55 55 55 50 55 61 55 55 55 55 61 61 55 55 49 61 55 61 61 55 55 55 55 47 55 55 61 61 61 61 53 53 53 50 61 50 53 61 53 61 53 50 50 50 50 50 61 61 50 52 43 50 50 61 61 47 47 61 61 50 50 53 53 61 53 61 61 53 53 42 50 53 53 50 50 33 50 47 47 61 53 50 47 46 61 61 61 53 53 61 61 53 61 61 61 50 61 61 61 61 53 61 47 61 53 61 53 46 53 52 46 53 57 53 53 53 53 53 30 53 45 45 53 52 52 53 53 50 53 57 57 57 47 53 53 53 47 52 57 52 53 53 42 53 52 50 53 45 53 43 50 53 50 52 50 53 53 42 46 53 53 45 45 53 53 53 50 47 47 47 45 50 40 50 45 57 52 45 38 53 53 45 53 52 46 57 45 53 52 42 53 53 45 57 57 47 33 57 52 42 50 53 45 52 46 46 45 45 43 46 38 37 47 34 34 47 53 47 41 57 52 39 57 47 45 41 52 50 50 46 37 53 37 47 30 41 52 40 40 42 50 37 23 38 42 38 52 38 37 37 34 37 20 52 39 36 50 37 47 53 57 57 53 35 35 53 57 36 35 37 33 29 28 33 37 37 37 44 42 40 41 32 31 57 46 36 40 33 40 36 57 57 41 32 30 37 30 40 41 36 28 53 43 30 26 37 57 57 41 37 24 41 29 36 57 57 51 41 37 24 33 23 41 34 35 39 51 27 32 21 30 27 41 29 30 30 35 31 33 44 30 32 29 22 51 43 29 37 27 29 30 20 20 23 29 21 29 29 32 32 29 39 25 36 13 30 30 29 28 29 19 22 26 29 28 38 29 35 28 51 30 21 29 29 28 24 46 51 51 51 51 51 29 28 32 26 33 30 41 33 16 29 16 20 21 21 23 22 31 33 35 33 29 28 28 29 31 13 31 27 18 28 20 16 17 27 29 18 25 24 23 33 29 17 28 33 31 25 30 17 23 16 19 20 31 31 34 29 7 8 8 20 22 7 10 36 13 6 5 30 28 17 23 34 25 22 21 25 28 14 18 12 28 22 16 23 22 25 19 21 16 22 5 24 25 22 33 14 22 22 22 18 27 31 19 21 26 26 23 26 33 19 28 14 9 15 31 22 33 44 44 34 15 25 10 17 18 22 31 19 23 19 16 30 10 17 31 26 13 10 28 23 34 28 23 23 12 3 4 8 6 5 5 11 15 17 7 12 20 9 19 14 13 18 7 11 14 6 12 23 14 12 13 8 21 9 7 4 19 12 26 8 30 8 8 16 14 24 8 21 36 26 8 4 6 7 6 6 10 3 5 4 6 5 22 10 9 9 5 6 20 6 27 8 16 23 4 3 5 8 3 4 6 5 14 9 7 30 26 9 15 7 15

Alignment Information

BAC End 1

BAC End 2

seq1: chr11_15242335_15243418
seq2: B6Ng01-038J24.g_66_1137 (reverse)

seq1  ATGAAAATTTGCCACACAACGATGGCTTAAGAGTCTCAAAATTATGATAA  50
      ||||||| ||||  ||| ||||||   ||||||||||||   ||||| ||
seq2  ATGAAAA-TTGC--CACCACGATG--CTAAGAGTCTCAA---TATGAAAA  42

seq1  AAACAGTACCAATTACAGACAGTTTCTCTGGCAAGAGCAATGTGTACATT  100
      |||||||||| |||||||||||||| ||||||||||||||||||||||||
seq2  AAACAGTACC-ATTACAGACAGTTT-TCTGGCAAGAGCAATGTGTACATT  90

seq1  TTCATGCAATTGCTGTCATACACCCCAGTAGACTTAGATGCCATGAACAG  150
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCAA-TGCTGTCATACACCCCAGTAGACTTAGATGCCATGAACAG  139

seq1  AACATTAGAGTCAGGCCAGGATTGTTGTTTCTCACCTAGACTGTGACAGC  200
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AACATTAGAGTCAGGCCAGGATTGTTGTTTCTCA-CTAGACTGTGACAGC  188

seq1  ATGTAGAACATGGTATTCTGACTTGACTGTTGTTCTTCTAATAAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGAACATGGTATTCTGACTTGACTGTTGTTCTTCTAATAAAAAAAA  238

seq1  TGATAAAGAACTATGTCTTGGCCTATTAATGTAAGAATCAAATCAGGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAGAACTATGTCTTGGCCTATTAATGTAAGAATCAAATCAGGTAA  288

seq1  GAATGTGAAAGCAATCTAAAAACTACAAAATGCCACTTAGGTAAAAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGAAAGCAATCTAAAAACTACAAAATGCCACTTAGGTAAAAGAGA  338

seq1  TTTGAGAGATAATACAATTTCATTTTCAAGCCTGGAATTATATGGATATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAGATAATACAATTTCATTTTCAAGCCTGGAATTATATGGATATC  388

seq1  CTAAGCAGCATAAGCCATTATTGATCATGCAGTAACTTCTTTCTTATTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCAGCATAAGCCATTATTGATCATGCAGTAACTTCTTTCTTATTAC  438

seq1  ATCACATGAATAGAGCCCAGGATATTTAAATAGCACTTGTAGCTAGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATGAATAGAGCCCAGGATATTTAAATAGCACTTGTAGCTAGAATT  488

seq1  TATGCCCTGGAAGTACACCTTAAATAGATTATTATAATTATTTTGATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCTGGAAGTACACCTTAAATAGATTATTATAATTATTTTGATAAA  538

seq1  ACTTAAATTCTAAGACTATTCCATTTAAATTCCTTGAAAATATAGTATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAATTCTAAGACTATTCCATTTAAATTCCTTGAAAATATAGTATTA  588

seq1  CAAAAGAAATATGGAAGCATCGAAATGCCTACTAGAAAACTAAACATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAAATATGGAAGCATCGAAATGCCTACTAGAAAACTAAACATGTT  638

seq1  TTCAAATATTATAAGATACCAAACAGAGCTGTGAATGATGCCTTGTATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATATTATAAGATACCAAACAGAGCTGTGAATGATGCCTTGTATAT  688

seq1  GTTAACATCCATTAGAATAGCATGAGTACATTTAGACAATTTAATACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACATCCATTAGAATAGCATGAGTACATTTAGACAATTTAATACTGA  738

seq1  TATGGCAAACCCTATAAAATATAGATAAAAAACTACAGGGCAAAATTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCAAACCCTATAAAATATAGATAAAAAACTACAGGGCAAAATTAAT  788

seq1  TAAGAGCTGGCTTTATACTATTAACCAAAATCTTGGTTATGTTGATATAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGCTGGCTTTATACTATTAACCAAAATCTTGGTTATGTTGATATAC  838

seq1  CATTTCTCCCAAAGTGACCGGTGAATTTCAACAGAATTTCAGTCAAAACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTCCCAAAGTGACCGGTGAATTTCAACAGAATTTCAGTCAAAACC  888

seq1  CCTTAAGATTTTTTTTTTTTTTTTTTTTTTTGGACGGAGGAGAAAGTTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAGATTTTTTTTTTTTTTTTTTTTTTTGGACGGAGGAGAAAGTTGA  938

seq1  AAATTCATCCAAAATCTTTTTAAAGAAATAAGTTCTATATTGTAAAGTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATCCAAAATCTTTTTAAAGAAATAAGTTCTATATTGTAAAGTAA  988

seq1  TTTTAGAAAATATTTTCAATGCCAATTGAAACATGGAGCTTTAGGGGAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAAAATATTTTCAATGCCAATTGAAACATGGAGCTTTAGGGGAAT  1038

seq1  TATAGCTATATTGAGAAGGGAGGGATAAGAATTC  1084
      ||||||||||||||||||||||||||||||||||
seq2  TATAGCTATATTGAGAAGGGAGGGATAAGAATTC  1072

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information