BAC Information

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BAC

Clone NameB6Ng01-039B05
Chromosome11 (Build37)
Map Location 36,930,881 - 36,931,974
singlet/doubletsinglet
Overlap genenone
Upstream geneOdz2
Downstream geneLOC100039148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039B05.bB6Ng01-039B05.g
ACCDH866450DH866451
length1,0921,160
definitionDH866450|Mus musculus domesticus DNA, BAC clone: B6Ng01-039B05, 5' end.DH866451|Mus musculus domesticus DNA, BAC clone: B6Ng01-039B05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctggattgctgtgtacaatagatatacaagagaagcgttttat
catctttaagggaaacttatcttcctgggggtgtgacaaaactccaggct
cctcagtcacctctccagggtgtcagaaatattataataatacagagggg
caaagtgaaagtgaaatgtctggtatttacagaaacgaggagtggatgat
gatcagacgggaaagcaagagaaggactttcattccattgtcaagagcaa
tttggagggggctttgggagaggcagcaggccagcagaagtggtctggca
gaaaggagaacaatgtggatgagaaaatcatgggctttgcagttacaaag
aactctcagaataactggcttgctccaggtgatagcagctggtctccagg
gaccagcggagaatcagtgaagcctcctcccatggctcaggcatatctgg
gccctcgcagcaggactctgcaacactgcttctccaaccagagctgcccc
tttctggtttctgtgggatgaccatggagaaagaattttctcacccaggc
tgtgtaatagctataattaaagccctctaatcgcccaaaacccagtgtgt
gggaacttggctgaaattgtatataatgaaagcaaaaggttttctttaca
ccaggaacgttgaagagcactctcttctttctttttttttttctttcttt
tatttatttttttactttttattttattttactgttagaatcagagaggc
ccattctttaggtagaaggagactctgtaggaagtgtttacctgaggttc
ccattgctatctgccaaaggaagggaccaaagcagagagcagcagttaga
ggattcagccaaggcaggcacaggctggctgccagtaggcccatgtgatt
catctctaaggtcaccagctacctgagtgaaagctccttttccatggtca
cttgggctgcagcctagaccaacttttctcaagtcagctgtgggtgaaca
tcaaagggcaccaacatctgcatgctaattttgtttatttggcagtgttc
agccagctctgcctttcaacactagctggaaacacctgtagt
gaattctcacctgacgaataccgaatgattgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcagctggcagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcaatctagcggttcctca
gaaaattggacatagtactaccagaggatcctggaatacctctcctgggc
atatccagaagatgttccaaccgataagaaggacacatactccactatgt
tcatagcagccttatttataatagccagaagctggaaagaacccagatgc
ccctcaacagaggaatggatacagaaaatgtggtacatttactcaatgga
gtactactcagctattaaaaagaatgaatttatgaaattcctaggtaaat
ggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaaag
aactcacacaatatctactcactgataagtggatattagcccagaaactt
agaatacccaatatataagatccactttgcgacacacattaaactcaaga
agaacgaagaccaaagtgtgaacactttgccccttcttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggatctgaaacgaa
aggatggaccatctagaggctgccttatccgggaatccatcccataatca
ccttccaaacgctggcaccattgcatacactagcaagattttgctgaaaa
gacccagatatagctgtctcttgtgagactatgccagggcctagcaaaca
ctgaagtggatgctcacagtcagctattggatggatcacagggcccccaa
ttgaggagctagagaagtacccaaggagctaaaggatctgcaccctatag
gtggaacaacaatataacttaccagtaccctggagctcatgtcctctagc
tgctatctatcagaagaatggctagtaggccatcagtgaagagaggccat
aatctgcacttttatgcctcagtaatggaaaccaggccaaatgaattgtg
tgttcgagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_36930881_36931974
seq2: B6Ng01-039B05.b_38_1129

seq1  GAATTCTCTGGATTGCTGTGTACAATAGATATACAAGAGAAGCGTTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGATTGCTGTGTACAATAGATATACAAGAGAAGCGTTTTAT  50

seq1  CATCTTTAAGGGAAACTTATCTTCCTGGGGGTGTGACAAAACTCCAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTAAGGGAAACTTATCTTCCTGGGGGTGTGACAAAACTCCAGGCT  100

seq1  CCTCAGTCACCTCTCCAGGGTGTCAGAAATATTATAATAATACAGAGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTCACCTCTCCAGGGTGTCAGAAATATTATAATAATACAGAGGGG  150

seq1  CAAAGTGAAAGTGAAATGTCTGGTATTTACAGAAACGAGGAGTGGATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTGAAAGTGAAATGTCTGGTATTTACAGAAACGAGGAGTGGATGAT  200

seq1  GATCAGACGGGAAAGCAAGAGAAGGACTTTCATTCCATTGTCAAGAGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGACGGGAAAGCAAGAGAAGGACTTTCATTCCATTGTCAAGAGCAA  250

seq1  TTTGGAGGGGGCTTTGGGAGAGGCAGCAGGCCAGCAGAAGTGGTCTGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGGGGGCTTTGGGAGAGGCAGCAGGCCAGCAGAAGTGGTCTGGCA  300

seq1  GAAAGGAGAACAATGTGGATGAGAAAATCATGGGCTTTGCAGTTACAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAGAACAATGTGGATGAGAAAATCATGGGCTTTGCAGTTACAAAG  350

seq1  AACTCTCAGAATAACTGGCTTGCTCCAGGTGATAGCAGCTGGTCTCCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCAGAATAACTGGCTTGCTCCAGGTGATAGCAGCTGGTCTCCAGG  400

seq1  GACCAGCGGAGAATCAGTGAAGCCTCCTCCCATGGCTCAGGCATATCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCGGAGAATCAGTGAAGCCTCCTCCCATGGCTCAGGCATATCTGG  450

seq1  GCCCTCGCAGCAGGACTCTGCAACACTGCTTCTCCAACCAGAGCTGCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCGCAGCAGGACTCTGCAACACTGCTTCTCCAACCAGAGCTGCCCC  500

seq1  TTTCTGGTTTCTGTGGGATGACCATGGAGAAAGAATTTTCTCACCCAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGTTTCTGTGGGATGACCATGGAGAAAGAATTTTCTCACCCAGGC  550

seq1  TGTGTAATAGCTATAATTAAAGCCCTCTAATCGCCCAAAACCCAGTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAATAGCTATAATTAAAGCCCTCTAATCGCCCAAAACCCAGTGTGT  600

seq1  GGGAACTTGGCTGAAATTGTATATAATGAAAGCAAAAGGTTTTCTTTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTTGGCTGAAATTGTATATAATGAAAGCAAAAGGTTTTCTTTACA  650

seq1  CCAGGAACGTTGAAGAGCACTCTCTTCTTTCTTTTTTTTTTTCTTTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAACGTTGAAGAGCACTCTCTTCTTTCTTTTTTTTTTTCTTTCTTT  700

seq1  TATTTATTTTTTTACTTTTTATTTTATTTTACTGTTAGAATCAGAGAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTTTTTACTTTTTATTTTATTTTACTGTTAGAATCAGAGAGGC  750

seq1  CCATTCTTTAGGTAGAAGGAGACTCTGTAGGAAGTGTTTACCTGAGGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTTTAGGTAGAAGGAGACTCTGTAGGAAGTGTTTACCTGAGGTTC  800

seq1  CCATTGCTATCTGCCAAAGGAAGGGACCAAAGCAGAGAGCAGCAGTTAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCTATCTGCCAAAGGAAGGGACCAAAGCAGAGAGCAGCAGTTAGA  850

seq1  GGATTCAGCCAAGGCAGGCACAGGCTGGCTGCCAGTAGGCCCATGTGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAGCCAAGGCAGGCACAGGCTGGCTGCCAGTAGGCCCATGTGATT  900

seq1  CATCTCTAAGGTCACCCAGCTACCTGAGTGAAAGCTCCTTTTCCATGGTC  950
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CATCTCTAAGGTCA-CCAGCTACCTGAGTGAAAGCTCCTTTTCCATGGTC  949

seq1  ACTTGGGCTGCAGCCTAGACCAACTTTTCTCAAGTCAGCTGT-GGTGAAC  999
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACTTGGGCTGCAGCCTAGACCAACTTTTCTCAAGTCAGCTGTGGGTGAAC  999

seq1  ATCAAAGGGCACCAACATCTGCATGCTTATTTTGTATTATTTGGCAGTGT  1049
      ||||||||||||||||||||||||||| ||||||| ||||||||||||||
seq2  ATCAAAGGGCACCAACATCTGCATGCTAATTTTGT-TTATTTGGCAGTGT  1048

seq1  TCAGCCAGCTCTGCATTTCAAACACTAGCTGGAAACACCTGTAGT  1094
      |||||||||||||| |||| |||||||||||||||||||||||||
seq2  TCAGCCAGCTCTGCCTTTC-AACACTAGCTGGAAACACCTGTAGT  1092