BAC Information

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BAC

Clone NameB6Ng01-040D01
Chromosome7 (Build37)11 (Build37)
Map Location 61,171,929 - 61,172,11797,743,546 - 97,743,659
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneGm1865, LOC100040718, LOC668789
Downstream geneMrps33p, LOC622146, Luzp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040D01.bB6Ng01-040D01.g
ACCDH867234DH867235
length1,017372
definitionDH867234|Mus musculus domesticus DNA, BAC clone: B6Ng01-040D01, 5' end.DH867235|Mus musculus domesticus DNA, BAC clone: B6Ng01-040D01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(61,171,929 - 61,172,117)(97,743,546 - 97,743,659)
sequence
gaattctgaaataaagtagaaattacatgaaattatgtgtttgtgtgtga
gctactttctactccttgaaatataaaaacgaactgtagaagaaccaatt
caaaagtatacagacaaggtatcacaattgaatcaaatcacccacaaagc
ttttgaaatactacaaatgttttcctttattttggaggttccaaaaaaat
tacctgttttcctgcaccagctgtcaatccttgcttgaggactgtgtcat
gatactgattttacatgtctcactctaaataattagaattaattagacta
ggataggatttagctctctatctatttttctatgatgttcagccagggtt
gaaacctcatctgaataatgggtgtgatagaactgagatcttgatgaaga
aaggacttctttaagaagcaggtagccctgtgctgtgagttcccctagta
cccctaacctgataacacttaaaaacctaacatgtttttaaattttttta
ttagatactttcttcatttacatttcaaatgctatcccaaaagtccccta
taccctccccctgccctgttcccctacccactcactctcaattcttggcc
ctggcgttcccctatactggggcatataaagtttgctacaccaaggggcc
tttcttcccagtgatggctgactaggccatctttctgctacatatgcagc
tagagacacaagctctggggctactgattatttcatatttttctacctat
aaggttgcagatcccttcagctcttgggtactttctctagctcctacatt
gggggccctgtgtttccatcctatagatgactgtgaccatccactttggt
atttgccaggcactggcaaaacctcacaggagacagctatatcggggtcc
ctttcagcaaatcttgctggcatatgcaatagtgtctgtgtttggtggct
gatcatggaatggacccccggtggagcagtctctggatggtccatccttt
catttagctcaaacttt
gaattcaaggacagcctggtcaacaaagtgagtttcaggacagccaggga
tatacagagaaaccctgtctcaaaaaacaaaaacaaaacagaaacaaaca
aaaataaaaaacaaataaaaaaccccaaataatcattgatcattaatatc
tctcaaaatcaatggagtcaattaactgataaaaagacacaggctaacag
agtagatgggaaaacagaatccatcattcagctgcgtacaagaaacacag
tatagcaacaaagatagatacaacatcacagtaaagggttaccaaaagtg
tttccaagaaaagagactcaagttgaaagctggaatagccattctaatat
ataacaacaacaacaacaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_61171929_61172117
seq2: B6Ng01-040D01.b_131_622

seq1  --------------------------------------------------  0
                                                        
seq2  AAGAACCAATTCAAAAGTATACAGACAAGGTATCACAATTGAATCAAATC  50

seq1  --------------------------------------------------  0
                                                        
seq2  ACCCACAAAGCTTTTGAAATACTACAAATGTTTTCCTTTATTTTGGAGGT  100

seq1  --------------------------------------------------  0
                                                        
seq2  TCCAAAAAAATTACCTGTTTTCCTGCACCAGCTGTCAATCCTTGCTTGAG  150

seq1  --------------------------------------------------  0
                                                        
seq2  GACTGTGTCATGATACTGATTTTACATGTCTCACTCTAAATAATTAGAAT  200

seq1  --------------------------------------------------  0
                                                        
seq2  TAATTAGACTAGGATAGGATTTAGCTCTCTATCTATTTTTCTATGATGTT  250

seq1  --------------------------------------AAGAACCAA---  9
                                             |||||  |   
seq2  CAGCCAGGGTTGAAACCTCATCTGAATAATGGGTGTGATAGAACTGAGAT  300

seq1  -TTCA-----AAAGTA--TATTTCCAATGGAGTGTCTCTTAGATCTG-GA  50
       || |     |||| |  | |||   | | || ||  |   |  ||| ||
seq2  CTTGATGAAGAAAGGACTTCTTTAAGAAGCAG-GTAGCCCTGTGCTGTGA  349

seq1  ATTGTCATTTTATTTCTGA----TTAAGGATTCCAATCTTTCTTATTTTT  96
       ||  | |  ||   || |     |||   ||  || | |      ||||
seq2  GTTCCCCTAGTACCCCTAACCTGATAACACTTAAAAACCTAACATGTTTT  399

seq1  TTCTTTTTTTTATTAGATATTTTCTTCATTTGCATTTCAAATGCTATCCT  146
      |   ||||||||||||||| ||||||||||| ||||||||||||||||| 
seq2  TAAATTTTTTTATTAGATACTTTCTTCATTTACATTTCAAATGCTATCCC  449

seq1  GAAAGTCTCCTATACCCTGCCCCCGCCCTGCTCCCCAACCCAC  189
       |||||| |||||||||| |||| |||||| ||||| ||||||
seq2  AAAAGTCCCCTATACCCTCCCCCTGCCCTGTTCCCCTACCCAC  492

seq1: chr11_97743546_97743659
seq2: B6Ng01-040D01.g_80_439

seq1  AGCCTGGACTACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAA  50
      ||||||| | |||||||||||| |||||||||||||| ||||||||||||
seq2  AGCCTGGTCAACAAAGTGAGTTTCAGGACAGCCAGGGATATACAGAGAAA  50

seq1  CCCTGTCTCGAAAAACAAAAAC--AACAACAACAAATAAA---AAACCCC  95
      ||||||||| ||||||||||||  ||||  |||||| |||   |||   |
seq2  CCCTGTCTCAAAAAACAAAAACAAAACAGAAACAAACAAAAATAAAAAAC  100

seq1  AAAACAACAACAACAAAAA-------------------------------  114
      |||  || |||  |||| |                               
seq2  AAATAAAAAACCCCAAATAATCATTGATCATTAATATCTCTCAAAATCAA  150

seq1  --------------------------------------------------  114
                                                        
seq2  TGGAGTCAATTAACTGATAAAAAGACACAGGCTAACAGAGTAGATGGGAA  200

seq1  --------------------------------------------------  114
                                                        
seq2  AACAGAATCCATCATTCAGCTGCGTACAAGAAACACAGTATAGCAACAAA  250

seq1  --------------------------------------------------  114
                                                        
seq2  GATAGATACAACATCACAGTAAAGGGTTACCAAAAGTGTTTCCAAGAAAA  300

seq1  --------------------------------------------------  114
                                                        
seq2  GAGACTCAAGTTGAAAGCTGGAATAGCCATTCTAATATATAACAACAACA  350

seq1  ----------  114
                
seq2  ACAACAAAAA  360