BAC Information

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BAC

Clone NameB6Ng01-043K07
Chromosome11 (Build37)
Map Location 39,434,403 - 39,435,585
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100039241, LOC382508
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043K07.bB6Ng01-043K07.g
ACCDH869645DH869646
length1,148467
definitionDH869645|Mus musculus domesticus DNA, BAC clone: B6Ng01-043K07, 5' end.DH869646|Mus musculus domesticus DNA, BAC clone: B6Ng01-043K07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgttacttttaaaaatattttattttgtaattttatttattt
tacctgaatgtatatctgtgtaccacatgtgtgcatggtactcacaggga
ctagaggagtgtactgaatcccctgggactagagttatcattggttgtga
gccaccatatgagtgttaggaatcagacccctgtcctctgtaagaggaac
aaatgctcttaaccactgagccatctctccaggacccagagtgttatttt
taacagttagatacattgagcctcatattctgcaaaatatctatacaaca
gtatgcaaaacaattttagcagaatccttaaactgagtatgtatcttacc
atataattaactggatccttttttttttttttttttttttggaaagtgga
ctaccctaaaatcgtatgatgggcacctgtcttctacctccatggctccc
ttctttatcatatactaagtttgtgtctttccacatctcatccatgatac
acagacaacaagatggatatttgagcaaaagaaggtctccatgggtcaaa
agctttgtcctatttgatactgctttcaggctcattcctgaaaccccaga
tcaaaagaacagatgagttttagttctctataaagaactatgccaaactc
aaaagttacaccacagctactgtagaatatgatctattcctgatttaaag
ttgaatgccaatggcttatactttaaggccaagaatcaacaaatgggacc
tcataaaattacaaagcttttacaaggcaaaggacactgtcaataggaca
aaaagacaaggaaacagattagaaaaatatctttcccaatcctacatctg
atagagggctactatcaaatatattcaaagaactcaagaagttatacgcc
agagacaataccctatcaaagggggggggggaagaagagctaacagagaa
tctcactaaggaacttgaatgggtgagaaacacctaacaaatggtcactt
cttagtcttcagggaaatgcatatcaattatcctggaatccatctccacc
cagtcaggatggctagttaaaaacaaggtgacagcgatgctggcagaaat
ggaaaagagagactctcatggtgggatgcacctgtacagccacttgga

tttgcagttactcaaaggaagatactatgatttttcaatgacatcgatgg
aactgtatggcattcagttaagtgaaataatgcaggcatggaaatacaac
ggccccatgacttcacttatatgtgggatatgcgttttcactagcactag
tgagcagaaaagttgttaccagagacagaagaggttagcttatgggcata
aaactaccattcagcaagaggaaggtctgcagccccattggaagaacaac
aataggaagcaaccagtaaccccagagctcccagggactaaaccaccaac
caaagggtacacatggagggacccaagtctccagatgcatatgtagcaga
ggatggccttgagaggagaggcccttgatcttgtgaaagcttgatgcccc
agtgtagggaaatcccaggacagggaagcaggagtggatgggttagtgag
cagggggatgggggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_39434403_39435585
seq2: B6Ng01-043K07.b_44_1191

seq1  GAATTCAATGTTACTTTTAAAAATATTTTATTTTGTAATTTTATTTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGTTACTTTTAAAAATATTTTATTTTGTAATTTTATTTATTT  50

seq1  TACCTGAATGTATATCTGTGTACCACATGTGTGCATGGTACTCACAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGAATGTATATCTGTGTACCACATGTGTGCATGGTACTCACAGGGA  100

seq1  CTAGAGGAGTGTACTGAATCCCCTGGGACTAGAGTTATCATTGGTTGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGGAGTGTACTGAATCCCCTGGGACTAGAGTTATCATTGGTTGTGA  150

seq1  GCCACCATATGAGTGTTAGGAATCAGACCCCTGTCCTCTGTAAGAGGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCATATGAGTGTTAGGAATCAGACCCCTGTCCTCTGTAAGAGGAAC  200

seq1  AAATGCTCTTAACCACTGAGCCATCTCTCCAGGACCCAGAGTGTTATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTCTTAACCACTGAGCCATCTCTCCAGGACCCAGAGTGTTATTTT  250

seq1  TAACAGTTAGATACATTGAGCCTCATATTCTGCAAAATATCTATACAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTTAGATACATTGAGCCTCATATTCTGCAAAATATCTATACAACA  300

seq1  GTATGCAAAACAATTTTAGCAGAATCCTTAAACTGAGTATGTATCTTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCAAAACAATTTTAGCAGAATCCTTAAACTGAGTATGTATCTTACC  350

seq1  ATATAATTAACTGGATCCTTTTTTTTTTTTTTTTTTTTTTGGAAAGTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTAACTGGATCCTTTTTTTTTTTTTTTTTTTTTTGGAAAGTGGA  400

seq1  CTACCCTAAAATCGTATGATGGGCACCTGTCTTCTACCTCCATGGCTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTAAAATCGTATGATGGGCACCTGTCTTCTACCTCCATGGCTCCC  450

seq1  TTCTTTATCATATACTAAGTTTGTGTCTTTCCACATCTCATCCATGATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATCATATACTAAGTTTGTGTCTTTCCACATCTCATCCATGATAC  500

seq1  ACAGACAACAAGATGGATATTTGAGCAAAAGAAGGTCTCCATGGGTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAACAAGATGGATATTTGAGCAAAAGAAGGTCTCCATGGGTCAAA  550

seq1  AGCTTTGTCCTATTTGATACTGCTTTCAGGCTCATTCCTGAAACCCCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGTCCTATTTGATACTGCTTTCAGGCTCATTCCTGAAACCCCAGA  600

seq1  TCAAAAGAACAGATGAGTTTTAGTTCTCTATAAAGAACTATGCCAAACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGAACAGATGAGTTTTAGTTCTCTATAAAGAACTATGCCAAACTC  650

seq1  AAAAGTTACACCACAGCTACTGTAGAATATGATCTATTCCTGATTTAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTACACCACAGCTACTGTAGAATATGATCTATTCCTGATTTAAAG  700

seq1  TTGAATGCCAATGGCTTATACTTTAAGGCCAAGAATCAACAAATGGGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGCCAATGGCTTATACTTTAAGGCCAAGAATCAACAAATGGGACC  750

seq1  TCATAAAATTACAAAGCTTTTACAAGGCAAAGGACACTGTCAATAGGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAATTACAAAGCTTTTACAAGGCAAAGGACACTGTCAATAGGACA  800

seq1  AAAAGACAAGGAAACAGATTAGAAAAAATATCTTTCCCAATCCTACATCT  850
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAAAGACAAGGAAACAGATTAG-AAAAATATCTTTCCCAATCCTACATCT  849

seq1  GATAGAGGGCTACTATCAAATATATTCAAAGAACTCAAGAAGTTATACGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAGGGCTACTATCAAATATATTCAAAGAACTCAAGAAGTTATACGC  899

seq1  CAGAGAACCAAATAACCCTATCAAAAGGGGGGGGGGGAAG-AGAGCTAAA  949
      ||||||  |||   |||||||| ||||||||||||||||| |||||| ||
seq2  CAGAGA--CAA--TACCCTATC-AAAGGGGGGGGGGGAAGAAGAGCT-AA  943

seq1  CAGAGAATTCTCAACTAAGGAAACTTGAATGGGTGAGAAACACCTAAACA  999
      ||||||| |||| ||||||| ||||||||||||||||||||||||||   
seq2  CAGAGAA-TCTC-ACTAAGG-AACTTGAATGGGTGAGAAACACCTAA--C  988

seq1  AAATGTTCAACATTCTTAGTCATCAGGGAAATGCATATCAAAATTATCCT  1049
      ||||| |||   ||||||||| |||||||||||||||||  |||||||||
seq2  AAATGGTCA--CTTCTTAGTCTTCAGGGAAATGCATATC--AATTATCCT  1034

seq1  GAGATTCCATCTCACACCAGTCAGGATGGCTAAGTTAAAAAACCAAGGTG  1099
      | || ||||||||   ||||||||||||||| |||||||||  |||||||
seq2  G-GAATCCATCTCCACCCAGTCAGGATGGCT-AGTTAAAAA--CAAGGTG  1080

seq1  ACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAGCACTCCTCCATTGT  1149
      ||||| |||||||||   ||  |||| ||||| ||| ||||      |  
seq2  ACAGC-GATGCTGGC--AGAAATGGA-AAAGA-GAG-ACTC------TCA  1118

seq1  TGGTGGAATTGCAAACTGGTACAGCCACTCTGGA  1183
      |||||| | |||  ||  ||||||||||| ||||
seq2  TGGTGGGA-TGC--ACCTGTACAGCCACT-TGGA  1148


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