BAC Information

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BAC

Clone NameB6Ng01-044H13
Chromosome11 (Build37)
Map Location 57,622,832 - 57,746,642
singlet/doubletdoublet
Overlap geneSap30l, Hand1
Upstream geneGria1, LOC667878, 1810073G14Rik, Mfap3, Galnt10
Downstream geneLOC624605, Larp1, LOC676527, LOC667947, Cnot8, Gemin5, Mrpl22, Irgb10, Igtp, LOC263305, LOC100041816, EG668249, 4930438A08Rik, Zfp692, Zfp672, 1700047K16Rik, Sh3bp5l, 2210415F13Rik, LOC624814, 1810065E05Rik, OTTMUSG00000005737, 4930504O13Rik, Olfr30, Olfr333-ps1, Olfr332, Olfr331, Olfr330, Olfr329, Olfr328, Olfr327-ps1, Olfr325, Olfr324, 2210407C18Rik, Olfr323, Trim58, Olfr216, OTTMUSG00000005755, Olfr320, LOC668058, Olfr319, Olfr318, Olfr317, Olfr316, Olfr315, Olfr314, 3100002J23Rik, Olfr313, Olfr312, GA_x5J8B7W3UM0-1747565-1747342, Olfr311, 2810021J22Rik, Zfp39, Butr1, Rnf187, LOC676691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044H13.bB6Ng01-044H13.g
ACCDH870214DH870215
length340780
definitionDH870214|Mus musculus domesticus DNA, BAC clone: B6Ng01-044H13, 5' end.DH870215|Mus musculus domesticus DNA, BAC clone: B6Ng01-044H13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,746,303 - 57,746,642)(57,622,832 - 57,623,609)
sequence
gaattcaagccttccagggcacccctgggggcccacaccctcgtgaggtg
gcagtggcttcctatgtaacagcttggcaattttacacttcctcttgctg
tgtggattttgtttgtttgtttgttttttgttttgtttttcgagacaggg
tttctctgtatagccctggctgtcctggaactcactttgtagaccaggct
ggcctcgaactcagaaaccacctgcctctgcctcccgaatgctgggatta
aaggcatgcaccattcatgcccggtgctgtgtggatttttatggatccat
atttaagaaagaaggcggggatcagggggagggagggagg
gaattcttggggccagacacatctgtttgttcatttgacattttggggtg
gtttgttttgttgcgcgcgcacgtgcgtgtgcgtgtgtgtgtgtgtgtgt
gtgtgtgtgcgcgtgtgtgtgtgtgcgtgtgcgtgtgcgtgtgtgttgtc
aaggcactgaggctggtctttggactcctgacctgtctggcctcttgagc
actgggatcacaggcattcaccaccacacccagcttgacataatttttaa
agccttttttttttggtctacttccagagcctgaaaggcttggtggcaat
tggccaactgaggaagtctcagcctccttacatcacagggtagctgaagt
catgccagggatggctagatgctactgaagtacatccataccttggtgcc
gtcctgggccatagtggtgtacttctggtagcctgggaaaaaaacagcta
agctacggagcaaggggcccgctacaccctacggctccttggcaagtctg
agtgccaggccatcgctgctggaagtagcttctcttccctctttgcagcg
tgtaagatgtggggccctattttgcacatagcttaagggactttggtctt
ttctcctgtgtagactgtgagccgacactttcaggaacataccagtgaat
gagaaagagacgcttgcctatttcatctacatggtgaagagtaacaggag
cagactggaccagaatcagagggcagcaagcagcttgagtgagctacagc
cacctgcccgtgtgaggtggggggccgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_57746303_57746642
seq2: B6Ng01-044H13.b_39_378 (reverse)

seq1  CCTCCCTCCCTCCCCCTGATCCCCGCCTTCTTTCTTAAATATGGATCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCCTCCCCCTGATCCCCGCCTTCTTTCTTAAATATGGATCCAT  50

seq1  AAAAATCCACACAGCACCGGGCATGAATGGTGCATGCCTTTAATCCCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCCACACAGCACCGGGCATGAATGGTGCATGCCTTTAATCCCAGC  100

seq1  ATTCGGGAGGCAGAGGCAGGTGGTTTCTGAGTTCGAGGCCAGCCTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGGGAGGCAGAGGCAGGTGGTTTCTGAGTTCGAGGCCAGCCTGGTCT  150

seq1  ACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCG  200

seq1  AAAAACAAAACAAAAAACAAACAAACAAACAAAATCCACACAGCAAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAACAAAAAACAAACAAACAAACAAAATCCACACAGCAAGAGG  250

seq1  AAGTGTAAAATTGCCAAGCTGTTACATAGGAAGCCACTGCCACCTCACGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAAAATTGCCAAGCTGTTACATAGGAAGCCACTGCCACCTCACGA  300

seq1  GGGTGTGGGCCCCCAGGGGTGCCCTGGAAGGCTTGAATTC  340
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGGGCCCCCAGGGGTGCCCTGGAAGGCTTGAATTC  340

seq1: chr11_57622832_57623609
seq2: B6Ng01-044H13.g_69_848

seq1  GAATTCTTGGGGCCAGACACATCTGTTTGTTCATTTGACATTTTGGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGGGCCAGACACATCTGTTTGTTCATTTGACATTTTGGGGTG  50

seq1  GTTTGTTTTGTTGCGCGCGCACGTGCGTGTGCGTGTGTGTGTGTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTGTTGCGCGCGCACGTGCGTGTGCGTGTGTGTGTGTGTGTGT  100

seq1  GTGTGTGTGCGCGTGTGTGTGTGTGCGTGTGCGTGTGCGTGTGTGTTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGCGCGTGTGTGTGTGTGCGTGTGCGTGTGCGTGTGTGTTGTC  150

seq1  AAGGCACTGAGGCTGGTCTTTGGACTCCTGACCTGTCTGGCCTCTTGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACTGAGGCTGGTCTTTGGACTCCTGACCTGTCTGGCCTCTTGAGC  200

seq1  ACTGGGATCACAGGCATTCACCACCACACCCAGCTTGACATAATTTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGATCACAGGCATTCACCACCACACCCAGCTTGACATAATTTTTAA  250

seq1  AGCCTTTTTTTTTTGGTCTACTTCCAGAGCCTGAAAGGCTTGGTGGCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTTTTTTTTGGTCTACTTCCAGAGCCTGAAAGGCTTGGTGGCAAT  300

seq1  TGGCCAACTGAGGAAGTCTCAGCCTCCTTACATCACAGGGTAGCTGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAACTGAGGAAGTCTCAGCCTCCTTACATCACAGGGTAGCTGAAGT  350

seq1  CATGCCAGGGATGGCTAGATGCTACTGAAGTACATCCATACCTTGGTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCAGGGATGGCTAGATGCTACTGAAGTACATCCATACCTTGGTGCC  400

seq1  GTCCTGGGCCATAGTGGTGTACTTCTGGTAGCCTGGGAAAAAAACAGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGGCCATAGTGGTGTACTTCTGGTAGCCTGGGAAAAAAACAGCTA  450

seq1  AGCTACGGAGCAAGGGGCCCGCTACACCCTACGGCTCCTTGGCAAGTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACGGAGCAAGGGGCCCGCTACACCCTACGGCTCCTTGGCAAGTCTG  500

seq1  AGTGCCAGGCCATCGCTGCTGGAAGTAGCTTCTCTTCCCTCTTTGCAGCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCAGGCCATCGCTGCTGGAAGTAGCTTCTCTTCCCTCTTTGCAGCG  550

seq1  TGTAAGATGTGGGGCCCTA-TTTGCACATAGCTTAAGGGACTTTGGTCTT  599
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGTAAGATGTGGGGCCCTATTTTGCACATAGCTTAAGGGACTTTGGTCTT  600

seq1  TTCTCCTGTGTAGACTGTGAGCCGACAC-TTCAGGAACATACCAGTGAAT  648
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCTCCTGTGTAGACTGTGAGCCGACACTTTCAGGAACATACCAGTGAAT  650

seq1  GAGAAAGAGACGCTTGCCTATTTCATCTACATGGTGAAGAGTAACAGGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAGACGCTTGCCTATTTCATCTACATGGTGAAGAGTAACAGGAG  700

seq1  CAGACTGGACCAGAAGTCAGAGGGCAGCAAGCAGCTTGAGTGAGCTACAG  748
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAGACTGGACCAGAA-TCAGAGGGCAGCAAGCAGCTTGAGTGAGCTACAG  749

seq1  CCACCTGCCCGTGTGAGGT-GGGGGCCGTGA  778
      ||||||||||||||||||| |||||||||||
seq2  CCACCTGCCCGTGTGAGGTGGGGGGCCGTGA  780