BAC Information

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BAC

Clone NameB6Ng01-045C15
Chromosome11 (Build37)
Map Location 104,857,233 - 104,858,162
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042645, Crhr1, 4933407P14Rik, Mapt, 1700081L11Rik, Cdc27, Myl4, LOC666721, EG629959, Itgb3, LOC666739, LOC629960, LOC666749, LOC632784
Downstream geneLOC276809, LOC100041125, 4921510J17Rik, Mettl2, LOC666771, Tlk2, 1700052K11Rik, Mrc2, Rnf190, EG666807, Tanc2, LOC667737, Cyb561, Ace, EG217246
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045C15.bB6Ng01-045C15.g
ACCDH870702DH870703
length9231,049
definitionDH870702|Mus musculus domesticus DNA, BAC clone: B6Ng01-045C15, 5' end.DH870703|Mus musculus domesticus DNA, BAC clone: B6Ng01-045C15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgttattaaaatgtggaccattccttagcttcctattgaatcc
ctatctgaattcttgtgtatgtatgcatgtgtacatgtgtgtggatgtac
tcgcccatgtccgttcatgtggaagacataggttgacatcaggatgtatt
ctgcaattctgtttccaccttaattgtctaagacaggctctctcattgaa
cctggaactcaccatttcagctagactggctggccagggaacatcctgga
gctgtccacctatgatccacagcaccagggttacaatacaaactcagcat
tttacccactgagccatatgagccatatgaagcttttaggaagaatagat
gagatcatgtgtgagattataaaatctcaaaccatgttgctgtgcacaaa
ggaaggtgaattcattgacagtatccctatgactcttttatgtatgttgt
tggcatgttacaataatactcttggactttttatgtaccaaatataaaga
agattatgataatcagaaaagaatcattctggattccttcaaatccagag
tttattttggccacactagtggcatttattgccctcagggactccagcac
catccttcattctttggttgtttcttgaatcatttatactggggtcttac
taatgtttatgtcaagactattgttagctgtaaaataaacaggtatagat
ccgagaagagagaacttatcctgacagggatcgcagtgtaatgatgtggg
atggaactggacaaggattgagtgatcttggaaacccccactgctttggg
agcttattcccctcaagcattttatagtctatgaggcattgattctactc
ctgagagtgagcccttgtgacttactaattctaattcctaatgcacaggc
ctgggggtaggttcagcatgagt
gaattcctgatctttccaagacttttatcatgaatgggtgttggatttta
tcaaatgctttctccgcatctaaggagatgatcatgtgttttttgtcttt
gagtttgtttatataatggattacgtagatggatttccatatattaagcc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgtt
ttaatgtgttcttggattcagatagcgagaattttattgagtaatttgca
tcgatattcataagggaaattggtctgaagttctctatctttgttggatc
tttctgtcgtataggtatcagagtaattgtggcttcatagaatgagttgg
gtagagtaccttctacttctattttgtggaacagtttgtgcagaactgga
attagatcttctttgaaggtctgatagaactctgcactaaacccatctag
tcctgggcttattttggtttgggagaccattaatgactgcatctatttct
ttaggggatatggtactgtttagatcgttagcttgatcctggtttaactt
tggtacttggtagctgtctagaaatttgtctatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
aagatgctgtccctgtgccctctagtgagtctggctaaggtttatctatc
ttgtggttttctcaaagaacccactcttcgtttggttgatccttgaatag
ttcttgtttcacttcattgattccgccctgagttgattattcctgctatc
tactcctcttggtgatttgcttccttttttcagagcttttagtgtgtgtc
aagctgctagtgagtgctctctctagtttcttttgggcactagagctatg
agttccctctaaaatgcttcatagagtccctacattgggtaagttgtgct
catttctaaaaactcaaaagtcctaattcttttctatcctccgtcacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_104857233_104858162
seq2: B6Ng01-045C15.b_42_964 (reverse)

seq1  ACTCATGCTGAAACCCTAACCCCCAGGCCTGTGGCATTAGGAATTAGGAA  50
      ||||||||||||  ||| |||||||||||||| ||||||||||||| |||
seq2  ACTCATGCTGAA--CCT-ACCCCCAGGCCTGT-GCATTAGGAATTA-GAA  45

seq1  TTAGTAAGTCACAAGGGCTCAACTCTCAGGAGTAGAATCAATGCCTCATA  100
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTAGTAAGTCACAAGGGCTC-ACTCTCAGGAGTAGAATCAATGCCTCATA  94

seq1  GACTATAAAATGCTTGAGGGGAAATAAGCTCCCAAAGCAGTGGGGGTTTC  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GACTATAAAATGCTTGAGGGG-AATAAGCTCCCAAAGCAGTGGGGGTTTC  143

seq1  CAAGATCACTCAATCCTTGTCCAGTTCCATCCCACATCATTACACTGCGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCACTCAATCCTTGTCCAGTTCCATCCCACATCATTACACTGCGA  193

seq1  TCCCTGTCAGGATAAGTTCTCTCTTCTCGGATCTATACCTGTTTATTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTCAGGATAAGTTCTCTCTTCTCGGATCTATACCTGTTTATTTTA  243

seq1  CAGCTAACAATAGTCTTGACATAAACATTAGTAAGACCCCAGTATAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAACAATAGTCTTGACATAAACATTAGTAAGACCCCAGTATAAATG  293

seq1  ATTCAAGAAACAACCAAAGAATGAAGGATGGTGCTGGAGTCCCTGAGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGAAACAACCAAAGAATGAAGGATGGTGCTGGAGTCCCTGAGGGC  343

seq1  AATAAATGCCACTAGTGTGGCCAAAATAAACTCTGGATTTGAAGGAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATGCCACTAGTGTGGCCAAAATAAACTCTGGATTTGAAGGAATCC  393

seq1  AGAATGATTCTTTTCTGATTATCATAATCTTCTTTATATTTGGTACATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGATTCTTTTCTGATTATCATAATCTTCTTTATATTTGGTACATAA  443

seq1  AAAGTCCAAGAGTATTATTGTAACATGCCAACAACATACATAAAAGAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCAAGAGTATTATTGTAACATGCCAACAACATACATAAAAGAGTC  493

seq1  ATAGGGATACTGTCAATGAATTCACCTTCCTTTGTGCACAGCAACATGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGATACTGTCAATGAATTCACCTTCCTTTGTGCACAGCAACATGGT  543

seq1  TTGAGATTTTATAATCTCACACATGATCTCATCTATTCTTCCTAAAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATTTTATAATCTCACACATGATCTCATCTATTCTTCCTAAAAGCT  593

seq1  TCATATGGCTCATATGGCTCAGTGGGTAAAATGCTGAGTTTGTATTGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATGGCTCATATGGCTCAGTGGGTAAAATGCTGAGTTTGTATTGTAA  643

seq1  CCCTGGTGCTGTGGATCATAGGTGGACAGCTCCAGGATGTTCCCTGGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGTGCTGTGGATCATAGGTGGACAGCTCCAGGATGTTCCCTGGCCA  693

seq1  GCCAGTCTAGCTGAAATGGTGAGTTCCAGGTTCAATGAGAGAGCCTGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCTAGCTGAAATGGTGAGTTCCAGGTTCAATGAGAGAGCCTGTCT  743

seq1  TAGACAATTAAGGTGGAAACAGAATTGCAGAATACATCCTGATGTCAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAATTAAGGTGGAAACAGAATTGCAGAATACATCCTGATGTCAACC  793

seq1  TATGTCTTCCACATGAACGGACATGGGCGAGTACATCCACACACATGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTCCACATGAACGGACATGGGCGAGTACATCCACACACATGTAC  843

seq1  ACATGCATACATACACAAGAATTCAGATAGGGATTCAATAGGAAGCTAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCATACATACACAAGAATTCAGATAGGGATTCAATAGGAAGCTAAG  893

seq1  GAATGGTCCACATTTTAATAACATGAATTC  930
      ||||||||||||||||||||||||||||||
seq2  GAATGGTCCACATTTTAATAACATGAATTC  923