BAC Information

Click to search

BAC

Clone NameB6Ng01-045G06
Chromosome11 (Build37)
Map Location 19,458,075 - 19,459,203
singlet/doubletsinglet
Overlap genenone
Upstream geneMeis1, LOC635455
Downstream geneLOC100042708, Glns-ps1, LOC665868, LOC100041937, Spred2, Actr2, Rab1, Cep68, LOC216544, Slc1a4, LOC100042746, LOC382492, Sertad2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045G06.bB6Ng01-045G06.g
ACCDH870857DH870858
length1,1111,018
definitionDH870857|Mus musculus domesticus DNA, BAC clone: B6Ng01-045G06, 5' end.DH870858|Mus musculus domesticus DNA, BAC clone: B6Ng01-045G06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttcaccaagcctggtctcagactggatccacttttgtccaag
atccaggacttacacctgagtccatgagggtctgattcagactcagatgg
tatgtatatagcaaacatgtcctctctttgtaccctagtcatagttgctg
ggccactcagtcttggacccagttgtaacctccccactatgaagcagccg
taagagtcaacctgagaggcaggctagtgattatccccagcatgcactgc
ttgatgtatgaattgagggccttgattcagggttcttagaaataacctta
ttagtggcttcaaggtcagcttttaatgccaaggctcagactgagtcaca
caggcttggcacatttctattcctccttaatactttgcatacccatggga
cttaaaactgacgtcacatggtagagaagagaatgcgatgtatgatctga
gttcagatctcctttctctccttgacggcagtgggacctttggtggctat
cttttttgaatattgtacttttaggtgggcttttgagtattggactttca
tgtgattcaacttgcaagaatattacaagagtaagaagtgatatacagaa
cccggcactgggtctggctggatggcttagtgtgtcaagtagttgtgcat
aagcttgaggcctggactttagatcctcagcacccacataaaagccagtc
aggcatggtggcagattataatcccagtgtttaggagacagagatgtggt
tccatgggcaaactgactagctagactactcaaactggtgagctctggga
tctgcaatagaccctgcctcggtaaagaaagtgaagagatgttagggaga
tgttgcttttatcctcagccatgacacaggcagtcgcaccatggccacct
gtggtcacactaccgtgtgtgcacatggacatgtgaacacattgaattta
gctcagcatgacacagcaggtgcacactactatctgtgtcaccatactgt
gtgccatggacaatgtgacacacacagactagcattttttcttggatgct
ttaagcactcatactggttgtcgttattgaagtgacgcacaagagactga
catggtatctg
gaattctttgtttagctctgtaccccattttttaataggattatttgaat
ttctggagtccagcttcttgagctctttatatatattggatattagtccc
ctatcagatttagaattgataaaaatcctttcccaatttgtggccttttt
gtcttattgatagtgtcttttgccttacagaagttttgcagttttatgag
gtcccatttgtcaatcttgatcttacagcacaagccattgctgttctgtt
taggaatttttccccagggcccatatcttcaaggcttttccctactttct
cctctattaatttcagtgtctctggttttacgtggaggtctttgatccac
ttagactttagctttgtacaaggagataagaatggatcaattcacattct
tctacatgataaccaccagttgtgccagcaccatttgttgaaaatgctgc
ctttttcctgctggattgttttatctcctttgtcaaagatcaagtgacca
taggtgtatgggttcatttctgggtcttcacttctattccattgatctac
ctgtctgtcactgtaccagtaccgtggagtttttatcacaatagctctgt
agtacagcttaatgtcaggcatggtgattccagcagaggttctttttatt
gttgagaatagtttttgttatcctaggttgtttattattccagatgaatt
tgcaaatttgcccttactatctcagtgaagaattgagttggaattttgat
ggggatagcattgaatctatagattgctttcggcagatagccatttttac
tatattaatcctgccaatccatgagcatgggagatcgttccatcttcaat
ttcctttcttcagagactgaagttcttatcatacagatcttcactttcta
tgtagaagtcacaccaaggtattttatattatttgtgactattgagaggt
gtgtttccctaattcttgtcagtcctttatcctttgttgtagagaaggcc
attgatttgtcgagttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_19458075_19459203
seq2: B6Ng01-045G06.b_46_1156 (reverse)

seq1  CAGATACCATGTCAGTCTCCTTTGTCTGCGTCACTATCAATAACGACAAC  50
      |||||||||||||||||||  |||  ||||||||| ||||||||||||||
seq2  CAGATACCATGTCAGTCTC--TTG--TGCGTCACT-TCAATAACGACAAC  45

seq1  CAGTTATGAGTGCTTAAAGCATCTCAAG-AAAAATGCTAGGTTCTGTGTG  99
      ||| ||||||||||||||||||| |||| |||||||||||  ||||||||
seq2  CAG-TATGAGTGCTTAAAGCATC-CAAGAAAAAATGCTAG--TCTGTGTG  91

seq1  TGTTCACA-TGTCCATGGGCACACAGTAATGGTGACCACAGATAGTAGTG  148
      || ||||| ||||||| |||||||||| ||||||| ||||||||||||| 
seq2  TG-TCACATTGTCCAT-GGCACACAGT-ATGGTGA-CACAGATAGTAGT-  136

seq1  GTGCACCTGCCTGTGTCATGGCTGAGCTTAAATTCCAATGTGTTCACATG  198
      ||||||||| ||||||||| ||||||| |||||| |||||||||||||||
seq2  GTGCACCTG-CTGTGTCAT-GCTGAGC-TAAATT-CAATGTGTTCACATG  182

seq1  TCCATGTGCACACACGGTAGTGGTGACCACAGGTGGCCATGGTGCGACTG  248
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCCATGTGCACACACGGTAGT-GTGACCACAGGTGGCCATGGTGCGACTG  231

seq1  CCTGTGTCATGGCTGAGGATAAAAGCAACATCTTCCCTAACATCTCTTCA  298
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CCTGTGTCATGGCTGAGGATAAAAGCAACATC-TCCCTAACATCTCTTCA  280

seq1  CTTTCTTTACCGAGGCAGGGTCTATTGCAGATCCCAGAGCTCACCAGTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTACCGAGGCAGGGTCTATTGCAGATCCCAGAGCTCACCAGTTT  330

seq1  GAGTAGTCTAGCTAGTCAGTTTGCCCATGGAACCACATCTCTGTCTCCTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTCTAGCTAGTCAGTTTGCCCATGGAACCACATCTCTGTCTCCTA  380

seq1  AACACTGGGATTATAATCTGCCACCATGCCTGACTGGCTTTTATGTGGGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGGGATTATAATCTGCCACCATGCCTGACTGGCTTTTATGTGGGT  430

seq1  GCTGAGGATCTAAAGTCCAGGCCTCAAGCTTATGCACAACTACTTGACAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGATCTAAAGTCCAGGCCTCAAGCTTATGCACAACTACTTGACAC  480

seq1  ACTAAGCCATCCAGCCAGACCCAGTGCCGGGTTCTGTATATCACTTCTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGCCATCCAGCCAGACCCAGTGCCGGGTTCTGTATATCACTTCTTA  530

seq1  CTCTTGTAATATTCTTGCAAGTTGAATCACATGAAAGTCCAATACTCAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTAATATTCTTGCAAGTTGAATCACATGAAAGTCCAATACTCAAA  580

seq1  AGCCCACCTAAAAGTACAATATTCAAAAAAGATAGCCACCAAAGGTCCCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCACCTAAAAGTACAATATTCAAAAAAGATAGCCACCAAAGGTCCCA  630

seq1  CTGCCGTCAAGGAGAGAAAGGAGATCTGAACTCAGATCATACATCGCATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGTCAAGGAGAGAAAGGAGATCTGAACTCAGATCATACATCGCATT  680

seq1  CTCTTCTCTACCATGTGACGTCAGTTTTAAGTCCCATGGGTATGCAAAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTCTACCATGTGACGTCAGTTTTAAGTCCCATGGGTATGCAAAGT  730

seq1  ATTAAGGAGGAATAGAAATGTGCCAAGCCTGTGTGACTCAGTCTGAGCCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGAGGAATAGAAATGTGCCAAGCCTGTGTGACTCAGTCTGAGCCT  780

seq1  TGGCATTAAAAGCTGACCTTGAAGCCACTAATAAGGTTATTTCTAAGAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTAAAAGCTGACCTTGAAGCCACTAATAAGGTTATTTCTAAGAAC  830

seq1  CCTGAATCAAGGCCCTCAATTCATACATCAAGCAGTGCATGCTGGGGATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATCAAGGCCCTCAATTCATACATCAAGCAGTGCATGCTGGGGATA  880

seq1  ATCACTAGCCTGCCTCTCAGGTTGACTCTTACGGCTGCTTCATAGTGGGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAGCCTGCCTCTCAGGTTGACTCTTACGGCTGCTTCATAGTGGGG  930

seq1  AGGTTACAACTGGGTCCAAGACTGAGTGGCCCAGCAACTATGACTAGGGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTACAACTGGGTCCAAGACTGAGTGGCCCAGCAACTATGACTAGGGT  980

seq1  ACAAAGAGAGGACATGTTTGCTATATACATACCATCTGAGTCTGAATCAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAGAGGACATGTTTGCTATATACATACCATCTGAGTCTGAATCAG  1030

seq1  ACCCTCATGGACTCAGGTGTAAGTCCTGGATCTTGGACAAAAGTGGATCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCATGGACTCAGGTGTAAGTCCTGGATCTTGGACAAAAGTGGATCC  1080

seq1  AGTCTGAGACCAGGCTTGGTGAAATGAATTC  1129
      |||||||||||||||||||||||||||||||
seq2  AGTCTGAGACCAGGCTTGGTGAAATGAATTC  1111