BAC Information

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BAC

Clone NameB6Ng01-047G24
Chromosome11 (Build37)
Map Location 110,451,096 - 110,491,964
singlet/doubletdoublet
Overlap genenone
Upstream geneWipi1, Prkar1a, BC029169, 1700012B07Rik, 1700023C21Rik, LOC100041492, Abca8b, Abca8a, Abca9, Abca6, Abca5, Map2k6
Downstream geneLOC100041523, Kcnj16, Kcnj2, LOC667003, LOC100041539, LOC100041559
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047G24.bB6Ng01-047G24.g
ACCDH872298DH872299
length930914
definitionDH872298|Mus musculus domesticus DNA, BAC clone: B6Ng01-047G24, 5' end.DH872299|Mus musculus domesticus DNA, BAC clone: B6Ng01-047G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,451,096 - 110,451,956)(110,491,049 - 110,491,964)
sequence
gaattcttgttgcagagggtctgggtttggtgtctaggacccacatggca
gattccaaacatctttaactctaattccagtggatctgacaacttcttct
tgcttctgtaagcaacagtcacacatatgttgcaaagacacacataccag
caaaacactaatatatataaaataaataagttaaaataaatcaattaatt
tttaaaaaaaatcaccaaaagctgactggtagtttagggagaagtttgga
gttgggaatttatctttttataacatcatagcacaatttgaatcagatgg
attctaagcactagacgatattttgatgagggagaggatctttgtcttct
ttaaagggtctggccacacgtagacttcagtcatagactatgaagaagtc
aagttggtagtctcctggaagctttgtctccactggctagcttccataga
cctggcagctggtaggcatactaccaggacagaaaaataatcaccaatat
cacccagctgtcaattttgtgagctacaaaaaaatatcttgcaacaacct
agcaagctatttccatcagtacgacagtggcacaaatatcatgggattga
acaatggccttttgactggatgtagggccttctctgctagatgaaaggca
aacctgggactctgattagggccaagaacttgtgtctagacaggacattg
gccctatgggagagcctattattattttgctaattaaatataacattaaa
acatcttctactgatgtatcattttctccataggttgctctatctcagta
ctcatcagacgacatcctttttttgcaaagagagtgactaacctagagac
ccacactgttcagtgtgaaaagaataacaattttagatgggatatggcat
catgtcacctcctactgagactcgatcata
gaattcatctgttgcagagtggcttctaaatccaaaacaaacttcaaaca
agggccacgtttagttcacaaccttaactgcttcctgggtttcgaggcaa
acggacatccaactacagcaatgcctacatgcgtgtgctaaaaggatttc
tgaggtcatccaagaaaggcccggatgatttagagcctatgctaaaaaga
gggaaataatggtaaagttgaaatagaaaaaaatttctaatttactttaa
tatcattaaaatgtctcaatggagaaaaaaaatatggggagttaaattgt
cattttccaaatttttccagaaccaatatctttaaaaaacattttaacag
tatcatttttcttcatttaattaaaaatcatgaatgatatgtgttcatct
ctcatcatcattacaccatacatacatatgtaacattacagtctgatata
tgagcacactcaccagtctagaagtttcaaagtgcagagcctagatccag
gcaggcaatttaccacgtccccaagaaattatataatctctctgagcatc
ttaaagtggaaggtttactctagaactatgcctgacaaatacagaagtgg
attcaaacagccatccattggattgagcacagagtccccaatgaaggagc
tagagaatggacccaaggaggtgaaagggtttgcagccccataggagcaa
caacaatatgaactaaccagtacccctagagctctctgggactaaaacaa
caaccaaagaaaacacatggtgggactcatgactctaactgcatatgtag
caaagattggcctagtcggtcatcagtgggaggagaggtccttggtcctg
tgaaggttctatgccccagtatagaaaatgccaggccaggaagtgggagt
gggtggttggtgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_110451096_110451956
seq2: B6Ng01-047G24.b_44_903

seq1  GAATTCTTGTTGCAGAGGGTCTGGGTTTGGTGTCTAGGACCCACATGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTGCAGAGGGTCTGGGTTTGGTGTCTAGGACCCACATGGCA  50

seq1  GATTCCAAACATCTTTAACTCTAATTCCAGTGGATCTGACAACTTCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCAAACATCTTTAACTCTAATTCCAGTGGATCTGACAACTTCTTCT  100

seq1  TGCTTCTGTAAGCAACAGTCACACATATGTTGCAAAGACACACATACCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTGTAAGCAACAGTCACACATATGTTGCAAAGACACACATACCAG  150

seq1  CAAAACACTAATATATATAAAATAAATAAGTTAAAATAAATCAATTAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACACTAATATATATAAAATAAATAAGTTAAAATAAATCAATTAATT  200

seq1  TTTAAAAAAAATCACCAAAAGCTGACTGGTAGTTTAGGGAGAAGTTTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAAATCACCAAAAGCTGACTGGTAGTTTAGGGAGAAGTTTGGA  250

seq1  GTTGGGAATTTATCTTTTTATAACATCATAGCACAATTTGAATCAGATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGAATTTATCTTTTTATAACATCATAGCACAATTTGAATCAGATGG  300

seq1  ATTCTAAGCACTAGACGATATTTTGATGAGGGAGAGGATCTTTGTCTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAGCACTAGACGATATTTTGATGAGGGAGAGGATCTTTGTCTTCT  350

seq1  TTAAAGGGTCTGGCCACACGTAGACTTCAGTCATAGACTATGAAGAAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGGTCTGGCCACACGTAGACTTCAGTCATAGACTATGAAGAAGTC  400

seq1  AAGTTGGTAGTCTCCTGGAAGCTTTGTCTCCACTGGCTAGCTTCCATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGTAGTCTCCTGGAAGCTTTGTCTCCACTGGCTAGCTTCCATAGA  450

seq1  CCTGGCAGCTGGTAGGCATACTACCAGGACAGAAAAATAATCACCAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCAGCTGGTAGGCATACTACCAGGACAGAAAAATAATCACCAATAT  500

seq1  CACCCAGCTGTCAATTTTGTGAGCTACAAAAAAATATCTTGCAACAACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGCTGTCAATTTTGTGAGCTACAAAAAAATATCTTGCAACAACCT  550

seq1  AGCAAGCTATTTCCATCAGTACGACAGTGGCACAAATATCATGGGATTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCTATTTCCATCAGTACGACAGTGGCACAAATATCATGGGATTGA  600

seq1  ACAATGGCCTTTTGACTGGATGTAGGGCCTTCTCTGCTAGATGAAAGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGCCTTTTGACTGGATGTAGGGCCTTCTCTGCTAGATGAAAGGCA  650

seq1  AACCTGGGACTCTGATTAGGGCCAAGAACTTGTGTCTAGACAGGACATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGGACTCTGATTAGGGCCAAGAACTTGTGTCTAGACAGGACATTG  700

seq1  GCCCTATGGGAGAGCCTATTATTATTTTGCTAATTAAATATAACATTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTATGGGAGAGCCTATTATTATTTTGCTAATTAAATATAACATTAAA  750

seq1  ACATCTTCTACTGATGTATCATTTTCTCCATAGGTTGCTCTATCTCAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTCTACTGATGTATCATTTTCTCCATAGGTTGCTCTATCTCAGTA  800

seq1  CTCATCAGAGGACATCC-TTTTTTGCAATAGAGAGTGACTAACCTAGAGA  849
      ||||||||| ||||||| |||||||||| |||||||||||||||||||||
seq2  CTCATCAGACGACATCCTTTTTTTGCAA-AGAGAGTGACTAACCTAGAGA  849

seq1  CCCACAACTGTT  861
      ||||| ||||||
seq2  CCCAC-ACTGTT  860

seq1: chr11_110491049_110491964
seq2: B6Ng01-047G24.g_68_980 (reverse)

seq1  TCACCAACCCACCCACTCCCACTTCCTGGCCCTGGCATTTTCCTATACTG  50
      ||||||| ||||||||||||||||||||| ||||||||||| ||||||||
seq2  TCACCAA-CCACCCACTCCCACTTCCTGG-CCTGGCATTTT-CTATACTG  47

seq1  GGGCATAGAACCTTCACAGGACCAAGGACCTCTCCTCCCACTGATGACCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATAGAACCTTCACAGGACCAAGGACCTCTCCTCCCACTGATGACCG  97

seq1  ACTAGGCCAATCTTTGCTACATATGCAGTTAGAGTCATGAGTCCCACCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGCCAATCTTTGCTACATATGCAGTTAGAGTCATGAGTCCCACCAT  147

seq1  GTGTTTTCTTTGGTTGTTGTTTTAGTCCCAGAGAGCTCTAGGGGTACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCTTTGGTTGTTGTTTTAGTCCCAGAGAGCTCTAGGGGTACTGG  197

seq1  TTAGTTCATATTGTTGTTGCTCCTATGGGGCTGCAAACCCCTTCACCTCC  250
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTAGTTCATATTGTTGTTGCTCCTATGGGGCTGCAAACCCTTTCACCTCC  247

seq1  TTGGGTCCATTCTCTAGCTCCTTCATTGGGGACTCTGTGCTCAATCCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTCCATTCTCTAGCTCCTTCATTGGGGACTCTGTGCTCAATCCAAT  297

seq1  GGATGGCTGTTTGAATCCACTTCTGTATTTGTCAGGCATAGTTCTAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCTGTTTGAATCCACTTCTGTATTTGTCAGGCATAGTTCTAGAGT  347

seq1  AAACCTTCCACTTTAAGATGCTCAGAGAGATTATATAATTTCTTGGGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTCCACTTTAAGATGCTCAGAGAGATTATATAATTTCTTGGGGAC  397

seq1  GTGGTAAATTGCCTGCCTGGATCTAGGCTCTGCACTTTGAAACTTCTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAAATTGCCTGCCTGGATCTAGGCTCTGCACTTTGAAACTTCTAGA  447

seq1  CTGGTGAGTGTGCTCATATATCAGACTGTAATGTTACATATGTATGTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGAGTGTGCTCATATATCAGACTGTAATGTTACATATGTATGTATG  497

seq1  GTGTAATGATGATGAGAGATGAACACATATCATTCATGATTTTTAATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATGATGATGAGAGATGAACACATATCATTCATGATTTTTAATTAA  547

seq1  ATGAAGAAAAATGATACTGTTAAAATGTTTTTTAAAGATATTGGTTCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAAAAATGATACTGTTAAAATGTTTTTTAAAGATATTGGTTCTGG  597

seq1  AAAAATTTGGAAAATGACAATTTAACTCCCCATATTTTTTTTCTCCATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTGGAAAATGACAATTTAACTCCCCATATTTTTTTTCTCCATTG  647

seq1  AGACATTTTAATGATATTAAAGTAAATTAGAAATTTTTTTCTATTTCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTTAATGATATTAAAGTAAATTAGAAATTTTTTTCTATTTCAAC  697

seq1  TTTACCATTATTTCCCTCTTTTTAGCATAGGCTCTAAATCATCCGGGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCATTATTTCCCTCTTTTTAGCATAGGCTCTAAATCATCCGGGCCT  747

seq1  TTCTTGGATGACCTCAGAAATCCTTTTAGCACACGCATGTAGGCATTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGATGACCTCAGAAATCCTTTTAGCACACGCATGTAGGCATTGCT  797

seq1  GTAGTTGGATGTCCGTTTGCCTCGAAACCCAGGAAGCAGTTAAGGTTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTGGATGTCCGTTTGCCTCGAAACCCAGGAAGCAGTTAAGGTTGTG  847

seq1  AACTAAACGTGGCCCTTGTTTGAAGTTTGTTTTGGATTTAGAAGCCACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAACGTGGCCCTTGTTTGAAGTTTGTTTTGGATTTAGAAGCCACTC  897

seq1  TGCAACAGATGAATTC  916
      ||||||||||||||||
seq2  TGCAACAGATGAATTC  913