BAC Information

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BAC

Clone NameB6Ng01-048I08
Chromosome11 (Build37)
Map Location 7,429,001 - 7,430,175
singlet/doubletsinglet
Overlap genenone
Upstream geneCcm2, LOC665327, AB182283, Tbrg4, Wap, LOC100041311, Ramp3, LOC665314, LOC626419, LOC665339, LOC665343, LOC100041332, Adcy1, LOC100041347, Igfbp1, Igfbp3
Downstream geneLOC665380, Tns3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048I08.bB6Ng01-048I08.g
ACCDH873053DH873054
length1,1601,150
definitionDH873053|Mus musculus domesticus DNA, BAC clone: B6Ng01-048I08, 5' end.DH873054|Mus musculus domesticus DNA, BAC clone: B6Ng01-048I08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtggagaataaactaaaattggtcaatgaagttctcagaacct
ttatcttaaagaaagggggggggcaagttatggatagtatgtacggtgac
tatatgaaccagttcaagtttgtttacctgaatagtctggatcgccacac
agcctcccaaagttccaaaggacacttgtttagcctctgttaaagcaggg
cagccaggagagagtaaaaaccccttgtggagcacagcagtgtccgtgct
tcctggagcctcttttccgtgtgcgtgcaaggcacctcaggattaaatat
tcgaatgttgttagaacagcaaatgaaactctaattatttctccagtgac
atttgacttgtaagaacacagcacaaggccgtcactcacatgtttctcaa
ctgaggcattagaatcatttacattcagctatttctggttgccaaattaa
gaaaaaaaaatgtagatgcctattcagggaggttgaaactgtgccgtgaa
acatgggagaagtggccaagtctcgttcttccccctgcacagcttccctg
tggcggcttcacgtcctctgctaaaagtacctgcttcatgctccctttgt
ccacacggtaaagacattacgaccatggctgcccactcgtctaagtttca
gtgaagacccagcagccatggacatttaacaatgcctggtttagaactga
gaaaaccgagatcctgaacattcagtaaacttgctttgggttttgtggtc
catgagtcaagaatggtgtgaaactcagggctctcaaccaggaactggag
aacaggatacatcagaattactccgtttatgccctccctgctcttgcacg
ggacagggccagatgacaacttctgggagaaatcaacaatcttcttatat
cagaactttattctctcgctctgtgtcttggtttcattatagactaatat
cactccaatcaggagccagctgcacactttacatgctaggcttctaatca
gttgtatttaacattcccatcaagttcaagactaagttttttcttttagt
tacagtaccatataaataacaatggtttattttctaaattgctctttagt
taaagaaaaatcatgcttaaggggattgtccgattttataaacattctgt
actcgtatag
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtgtacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagacgtggatgctcacagtcagctaatggatgatcatatggctcccaa
tgagagctagagaagtagccaggagctaaggatctgcaccctatagtgaa
caacatatgagctaccagtacccgagctctgactctagctgcattatatt
caaagatgcctagtcgccacacttgaagaagccattgacttgcaactttt
atgtccaggtacaggaattcaagccaaagggatgggtggcagggaatggg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_7429001_7430175
seq2: B6Ng01-048I08.b_42_1201

seq1  GAATTCAGTGGAGAATAAACTAAAATTGGTCAATGAAGTTCTCAGAACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGAGAATAAACTAAAATTGGTCAATGAAGTTCTCAGAACCT  50

seq1  TTATCTTAAAGAAAGGGGGGGGGCAAGTTATGGATAGTATGTACGGTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTAAAGAAAGGGGGGGGGCAAGTTATGGATAGTATGTACGGTGAC  100

seq1  TATATGAACCAGTTCAAGTTTGTTTACCTGAATAGTCTGGATCGCCACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAACCAGTTCAAGTTTGTTTACCTGAATAGTCTGGATCGCCACAC  150

seq1  AGCCTCCCAAAGTTCCAAAGGACACTTGTTTAGCCTCTGTTAAAGCAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCCAAAGTTCCAAAGGACACTTGTTTAGCCTCTGTTAAAGCAGGG  200

seq1  CAGCCAGGAGAGAGTAAAAACCCCTTGTGGAGCACAGCAGTGTCCGTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGGAGAGAGTAAAAACCCCTTGTGGAGCACAGCAGTGTCCGTGCT  250

seq1  TCCTGGAGCCTCTTTTCCGTGTGCGTGCAAGGCACCTCAGGATTAAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAGCCTCTTTTCCGTGTGCGTGCAAGGCACCTCAGGATTAAATAT  300

seq1  TCGAATGTTGTTAGAACAGCAAATGAAACTCTAATTATTTCTCCAGTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAATGTTGTTAGAACAGCAAATGAAACTCTAATTATTTCTCCAGTGAC  350

seq1  ATTTGACTTGTAAGAACACAGCACAAGGCCGTCACTCACATGTTTCTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACTTGTAAGAACACAGCACAAGGCCGTCACTCACATGTTTCTCAA  400

seq1  CTGAGGCATTAGAATCATTTACATTCAGCTATTTCTGGTTGCCAAATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCATTAGAATCATTTACATTCAGCTATTTCTGGTTGCCAAATTAA  450

seq1  GAAAAAAAAATGTAGATGCCTATTCAGGGAGGTTGAAACTGTGCCGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAATGTAGATGCCTATTCAGGGAGGTTGAAACTGTGCCGTGAA  500

seq1  ACATGGGAGAAGTGGCCAAGTCTCGTTCTTCCCCCTGCACAGCTTCCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGAGAAGTGGCCAAGTCTCGTTCTTCCCCCTGCACAGCTTCCCTG  550

seq1  TGGCGGCTTCACGTCCTCTGCTAAAAGTACCTGCTTCATGCTCCCTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGGCTTCACGTCCTCTGCTAAAAGTACCTGCTTCATGCTCCCTTTGT  600

seq1  CCACACGGTAAAGACATTACGACCATGGCTGCCCACTCGTCTAAGTTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACGGTAAAGACATTACGACCATGGCTGCCCACTCGTCTAAGTTTCA  650

seq1  GTGAAGACCCAGCAGCCATGGACATTTAACAATGCCTGGTTTAGAACTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGACCCAGCAGCCATGGACATTTAACAATGCCTGGTTTAGAACTGA  700

seq1  GAAAACCGAGATCCTGAACATTCAGTAAACTTGCTTTGGGTTTTGTGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCGAGATCCTGAACATTCAGTAAACTTGCTTTGGGTTTTGTGGTC  750

seq1  CATGAGTCAAGAATGGTGTGAAACTCAGGGCTCTCAACCAGGAACTGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTCAAGAATGGTGTGAAACTCAGGGCTCTCAACCAGGAACTGGAG  800

seq1  AACAGGATACATCAGAATTACTCCGTTTATGCCCTCCCTGCTCTTGCAGG  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AACAGGATACATCAGAATTACTCCGTTTATGCCCTCCCTGCTCTTGCACG  850

seq1  GGACAGGGCCAGAAGGACAACTTCTGGGAGAAATCAAACAATCTTCTTAT  900
      |||||||||||| | |||||||||||||||||||| ||||||||||||||
seq2  GGACAGGGCCAG-ATGACAACTTCTGGGAGAAATC-AACAATCTTCTTAT  898

seq1  ATCAGGAACTTTATTCTCTCGCTCTGTGTCTTGGTTTCATTATAGAACTA  950
      |||| |||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATCA-GAACTTTATTCTCTCGCTCTGTGTCTTGGTTTCATTATAG-ACTA  946

seq1  ATATCACTCCAATCAAGGAGCCAGCTGCACACTTTACATGCTAGGCTTCT  1000
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATATCACTCCAATC-AGGAGCCAGCTGCACACTTTACATGCTAGGCTTCT  995

seq1  AATCAGGTTGTATTTTAACATTCCCATCAAGTTCAAGACTAAGTTTTTTC  1050
      ||||| |||||| |||||||||||||||||||||||||||||||||||||
seq2  AATCA-GTTGTA-TTTAACATTCCCATCAAGTTCAAGACTAAGTTTTTTC  1043

seq1  TTTTAGTAACAGTACCATAATAATAACAATGG-TTATTTTCTAGAGTTGC  1099
      ||||||| |||||||||||  ||||||||||| |||||||||| | ||||
seq2  TTTTAGTTACAGTACCATATAAATAACAATGGTTTATTTTCTA-AATTGC  1092

seq1  TCTTTAGTTAAAAGAAAAATCATGCTTAAGGTAGAATTGGTCGTATTTTA  1149
      ||||||||| |||||||||||||||||||||  | ||| |||  ||||||
seq2  TCTTTAGTT-AAAGAAAAATCATGCTTAAGG--GGATT-GTCCGATTTTA  1138

seq1  TAATACATTCTGTAACTCGGTTATAG  1175
      ||| ||||||||| |||||  |||||
seq2  TAA-ACATTCTGT-ACTCG--TATAG  1160