BAC Information

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BAC

Clone NameB6Ng01-049C16
Chromosome11 (Build37)
Map Location 121,734,764 - 121,735,771
singlet/doubletsinglet
Overlap genenone
Upstream geneCcdc57, LOC100043454, Slc16a3, Csnk1d, Cd7, Sectm1b, Sectm1a, LOC637008, 4921530G04Rik, Tex19, Uts2r, 1110031I02Rik, Hexdc, BC017643, Narf, Foxk2, Wdr45l, Rab40b, BC032265, Fn3k, Tbcd, Zfp750, B3gntl1, Metrnl, Ptchd3
Downstream geneLOC667879, LOC674842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049C16.bB6Ng01-049C16.g
ACCDH873507DH873508
length988448
definitionDH873507|Mus musculus domesticus DNA, BAC clone: B6Ng01-049C16, 5' end.DH873508|Mus musculus domesticus DNA, BAC clone: B6Ng01-049C16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattacctgttcatcagacaacattaccaaggaaaaacagggcaa
gacctcagagaccaatcacagttcatgctttgcatgatgtagaagaacac
agtagggaaagctttaaggaaaacacacaggacttttctctccctgacca
tcactaacatagccaaaggcactctggtcattgtgtgttcttcctatgaa
ccttccaaattatgaagaagcttggaattcaacattttgaaaactaatag
tcacataacagggatctttctggaactgcttcaatgcatcagcagcagat
cccatgttctgatgttctgttgaatggcaaggaagtgaacatggagggtg
gtctagaaagactgccatgtgaatctttaagatattcatctctaccctat
ccaatatgtgtctgtgtttaaataaacactgtcagaagctagagggaagc
accttagaaccctctcttgcatctcataacacaatggggttggttctctt
tgcccaaggatcattaaatctgttagagcatatcctggagttcttgtctg
gcttgagaaggcctttactgtgctttaaactctagcccccttggtcattt
tggtgcctcttattgtctcaagtgaaacagactgctttagaactaatgtc
taggcttactcctatccctatagtatgggcttccaggagctaacagaaat
ggaggcatgactgtactctctgagtctactcttcaagattttcaccacct
tagtaatttcccaaagattagacagttaatttgtgactcaggttccacat
cgatgaatttctgcttgaaaacctgggcatgctatacacacctataatct
cagcctttagagtagagtaggaggaatttcattcagactaccctggctac
atgtgagatacactgtctcatgaagaaaagaatgaaagaaaggagtgtag
atgatatagatgagaaaatgaagaagaggggaggagga
ttcaccccaattcagcaggaagcaactttacaaagatcattcattgccct
agttccttaagttggggtggataggtttggtcatttgatgtgttatattt
gttatcatttaggatggaagattattattggttatgatcagggagtgata
aaatttaaagtctttttgttagaattattgtatagtaatagaaatttaag
ttttttattatatgttaatagaactttaaggttttgtttgaattattgta
tattaatagaaacacaaagttgtttttaattgttgtacattgatggaaat
ttaaggtttttcttttaattattgtatattgagaggaatttaaatttttg
tttaattattgtatattgatagaagtctaaaattgttttgtctgaactat
tttatttgatagaaatttaaggttgtttcgttagatcatttgactata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_121734764_121735771
seq2: B6Ng01-049C16.b_40_1027 (reverse)

seq1  TCCTCCTCCCCTCTCCTTCCATTTTTCCTCATCTATATCCTTCTACAACT  50
      |||||||||||||| ||| ||||||  ||||||||||| | ||||| |||
seq2  TCCTCCTCCCCTCTTCTT-CATTTT--CTCATCTATAT-CATCTAC-ACT  45

seq1  CCTTTTCCTTTCCATTTCTTTTTCTTCCATGAGGACAGTGTATCTCACAT  100
      |||||  |||| ||||   ||||||| ||||| |||||||||||||||||
seq2  CCTTT--CTTT-CATT--CTTTTCTT-CATGA-GACAGTGTATCTCACAT  88

seq1  GTAGCCCAGGGTAGTCTTGAATTGAAATTCCTCCTACCTCTACCTCTTAA  150
      |||| ||||||||||| |||| |||||||||||||| ||||| ||| |||
seq2  GTAG-CCAGGGTAGTC-TGAA-TGAAATTCCTCCTA-CTCTA-CTC-TAA  132

seq1  AGGCTGAGATTATAGGTGTGTATAGCATGCCCAGGTTTTTCAAGCAGAAA  200
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGGCTGAGATTATAGGTGTGTATAGCATGCCCAGG-TTTTCAAGCAGAAA  181

seq1  TTCATCGATGTGGAACCCTGAGTCACAAATTAACTGTCTAATCTTTGGGA  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTCATCGATGTGGAA-CCTGAGTCACAAATTAACTGTCTAATCTTTGGGA  230

seq1  AATTACTAAGGTGGTGAAAATCTTGAAGAGTAGACTCAGAGAGTACAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTAAGGTGGTGAAAATCTTGAAGAGTAGACTCAGAGAGTACAGTC  280

seq1  ATGCCTCCATTTCTGTTAGCTCCTGGAAGCCCATACTATAGGGATAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCCATTTCTGTTAGCTCCTGGAAGCCCATACTATAGGGATAGGAG  330

seq1  TAAGCCTAGACATTAGTTCTAAAGCAGTCTGTTTCACTTGAGACAATAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTAGACATTAGTTCTAAAGCAGTCTGTTTCACTTGAGACAATAAG  380

seq1  AGGCACCAAAATGACCAAGGGGGCTAGAGTTTAAAGCACAGTAAAGGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACCAAAATGACCAAGGGGGCTAGAGTTTAAAGCACAGTAAAGGCCT  430

seq1  TCTCAAGCCAGACAAGAACTCCAGGATATGCTCTAACAGATTTAATGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGCCAGACAAGAACTCCAGGATATGCTCTAACAGATTTAATGATC  480

seq1  CTTGGGCAAAGAGAACCAACCCCATTGTGTTATGAGATGCAAGAGAGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCAAAGAGAACCAACCCCATTGTGTTATGAGATGCAAGAGAGGGT  530

seq1  TCTAAGGTGCTTCCCTCTAGCTTCTGACAGTGTTTATTTAAACACAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGTGCTTCCCTCTAGCTTCTGACAGTGTTTATTTAAACACAGACA  580

seq1  CATATTGGATAGGGTAGAGATGAATATCTTAAAGATTCACATGGCAGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGGATAGGGTAGAGATGAATATCTTAAAGATTCACATGGCAGTCT  630

seq1  TTCTAGACCACCCTCCATGTTCACTTCCTTGCCATTCAACAGAACATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGACCACCCTCCATGTTCACTTCCTTGCCATTCAACAGAACATCAG  680

seq1  AACATGGGATCTGCTGCTGATGCATTGAAGCAGTTCCAGAAAGATCCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGGATCTGCTGCTGATGCATTGAAGCAGTTCCAGAAAGATCCCTG  730

seq1  TTATGTGACTATTAGTTTTCAAAATGTTGAATTCCAAGCTTCTTCATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGACTATTAGTTTTCAAAATGTTGAATTCCAAGCTTCTTCATAAT  780

seq1  TTGGAAGGTTCATAGGAAGAACACACAATGACCAGAGTGCCTTTGGCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGGTTCATAGGAAGAACACACAATGACCAGAGTGCCTTTGGCTAT  830

seq1  GTTAGTGATGGTCAGGGAGAGAAAAGTCCTGTGTGTTTTCCTTAAAGCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGATGGTCAGGGAGAGAAAAGTCCTGTGTGTTTTCCTTAAAGCTT  880

seq1  TCCCTACTGTGTTCTTCTACATCATGCAAAGCATGAACTGTGATTGGTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACTGTGTTCTTCTACATCATGCAAAGCATGAACTGTGATTGGTCT  930

seq1  CTGAGGTCTTGCCCTGTTTTTCCTTGGTAATGTTGTCTGATGAACAGGTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTCTTGCCCTGTTTTTCCTTGGTAATGTTGTCTGATGAACAGGTA  980

seq1  ATGAATTC  1008
      ||||||||
seq2  ATGAATTC  988