BAC Information

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BAC

Clone NameB6Ng01-049G22
Chromosome11 (Build37)
Map Location 111,497,744 - 111,561,442
singlet/doubletdoublet
Overlap geneEG629966
Upstream geneLOC100041523, Kcnj16, Kcnj2, LOC667003, LOC100041539, LOC100041559
Downstream geneLOC629967, LOC100041589, LOC100043020, EG668396, EG667038, LOC100041610, LOC671963, LOC667047, BC006965
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049G22.bB6Ng01-049G22.g
ACCDH873697DH873698
length1,0941,019
definitionDH873697|Mus musculus domesticus DNA, BAC clone: B6Ng01-049G22, 5' end.DH873698|Mus musculus domesticus DNA, BAC clone: B6Ng01-049G22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,497,744 - 111,498,866)(111,560,406 - 111,561,442)
sequence
gaattcttttttttttttgttacattttttaaattaggtattttcctcat
ttacatttcccaatgctatcccaaaaatccccatacccacccccccccac
actcctctacccatccactccccctttttggccctggcgttcccctgtac
tggggcatataaagtttgcaagtccaatgggcctctctttccagtgatgg
ccgactgggccatcttttgatacatatgcagctagagtcaagagctccct
ccggggtactggttagttcatgttgttgcacctatagggttgcaaatctc
tttaattaattctaaagtcctttgccatgcaaaatagaatgcaaactcat
gcaaaaaagtgaggaggaccatcttgttgtgggacacccaaatctggtcc
tttcttctaaatcgcagcatcttaaaatctgtccatgtggatgggagaaa
atacaataacaacaacaacaacaacaacaacaacaacaccctaaatatat
aatacttcacatgcatattcaaaattggcattgcgaaaacccaccaggca
ccttcttgtataatgtccttgtcctttctacttttaggtaactgggttca
cacttcaacttctttccaagactcctaattgcatcatatgatactaagta
gagacatcatcaagaaaaaatttaaatgcaataatcgaaaatatgatatg
tagatgagcaagcagagaaactagagatttttttgttgttgttgtttaaa
ttacagacttctgtgcggccgacttagctgtcttgcttagatggaaaagg
agcttaatggaaaaatcacttctatacattaaaaatcaattgtgagattt
attaaggaaaccaaacaactttcatttctgtttttacatacagccaaggt
cccattctgacagttagggcagcagtgaggagctacagagttttgaggaa
gatattcgtgatacaaaggcgacttcaattggctactcagctactgccgt
gggtctccaccatgattctctgggatacagctcattaaggcactgtatgg
aacataccaaatcacttctttgagcatatccatttccattccac
gaattcacactgctctcaaaaactggcattctacagttggattccatcct
gacacatctgttgccttcccaggaatagcacgggtggctcagcaacagtg
acaggatgcattcattctgaaattacagagattgcaagtattgattcttt
ggatccacaccgtcctctgcttcggaaggagatgctcttcatttccaatc
ttttggcaatgctcagccatcagacatttttgagtatatatctgatttct
aagtcagggacccttagcactcctccacgatgtttcctcctccaacccct
cccctgctcattggttggatgggaaatcgttctgttagagtagtaaaaag
tcaaagttgaaggggtcaaaaagggtttcagggtcacaaatcatggaagg
atccaataggttttgaagggaagataaccataggatggataaagcagggt
acgtgggggtctcttactagcttatgaagtagaaaatcacttttaaggcc
ccccaaagggaaatcaatggcttccttccctgtggaggactttcctgtct
tcaagggaacagcataaataactctactattataagaaaggatcagcctc
ttattaagagtcataaatcaagaattattttatttcacaatgtaagtccc
aagtgtagttctaaagtgaaagtatatcttaaatagcatgtgggtatatg
taatttatatttctgtctctatgtggtgctatgatatctgtttatgtttg
aataattttaatatttggagtaatataccaacctgcaacttaaagaaaac
cacaaaggagggcataaaatatgaaatttctattatttccatttcaccta
atattgtattagagtgtccaaaagcaataaaatcagaactgtgtgtgaca
agattcactgtatctttctatgacaagagggcacgtctgccttgtactat
gtaatggatgggatcacatgccttgaacaagcttgtaccattgaaggcaa
tgaaggtggtggtgaagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_111497744_111498866
seq2: B6Ng01-049G22.b_43_1136

seq1  GAATTCTTTTTTTTTTTTGTTACATTTTTTAAATTAGGTATTTTCCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTTTTTTTGTTACATTTTTTAAATTAGGTATTTTCCTCAT  50

seq1  TTACATTTCCCAATGCTATCCCAAAAATCCCCATACCCACCCCCCCCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTCCCAATGCTATCCCAAAAATCCCCATACCCACCCCCCCCCAC  100

seq1  ACTCCTCTACCCATCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCTACCCATCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTAC  150

seq1  TGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGG  200

seq1  CCGACTGGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTGGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCCT  250

seq1  CCGGGGTACTGGTTAGTTCATGTTGTTGCACCTATAGGGTTGCAAATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGGTACTGGTTAGTTCATGTTGTTGCACCTATAGGGTTGCAAATCTC  300

seq1  TTTAATTAATTCTAAAGTCCTTTGCCATGCAAAATAGAATGCAAACTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTAATTCTAAAGTCCTTTGCCATGCAAAATAGAATGCAAACTCAT  350

seq1  GCAAAAAAGTGAGGAGGACCATCTTGTTGTGGGACACCCAAATCTGGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAAGTGAGGAGGACCATCTTGTTGTGGGACACCCAAATCTGGTCC  400

seq1  TTTCTTCTAAATCGCAGCATCTTAAAATCTGTCCATGTGGATGGGAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTAAATCGCAGCATCTTAAAATCTGTCCATGTGGATGGGAGAAA  450

seq1  ATACAATAACAACAACAACAACAACAACAACAACAACACCCTAAATATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATAACAACAACAACAACAACAACAACAACAACACCCTAAATATAT  500

seq1  AATACTTCACATGCATATTCAAAATTGGCATTGCGAAAACCCACCAGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTCACATGCATATTCAAAATTGGCATTGCGAAAACCCACCAGGCA  550

seq1  CCTTCTTGTATAATGTCCTTGTCCTTTCTACTTTTAGGTAACTGGGTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTGTATAATGTCCTTGTCCTTTCTACTTTTAGGTAACTGGGTTCA  600

seq1  CACTTCAACTTCTTTCCAAGACTCCTAATTGCATCATATGATACTAAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCAACTTCTTTCCAAGACTCCTAATTGCATCATATGATACTAAGTA  650

seq1  GAGACATCATCAAGAAAAAATTTAAATGCAATAATCGAAAATATGATATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATCATCAAGAAAAAATTTAAATGCAATAATCGAAAATATGATATG  700

seq1  TAGATGAGCAAGCAGAGAAACTAGAGATTTTTTTGTTGTTGTTGTTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAGCAAGCAGAGAAACTAGAGATTTTTTTGTTGTTGTTGTTTAAA  750

seq1  TTACAGACTTCTGTGCGGCCGACTTAGCTGTCTTGCTTAGATGGAAAAAG  800
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTACAGACTTCTGTGCGGCCGACTTAGCTGTCTTGCTTAGATGG-AAAAG  799

seq1  GAGCTTAATGGAAAAATCACTTCTATACATTAAAAATCAAATTTGTGAAG  850
      ||||||||||||||||||||||||||||||||||||||||  ||||| ||
seq2  GAGCTTAATGGAAAAATCACTTCTATACATTAAAAATCAA--TTGTG-AG  846

seq1  ATTTTATTAAGGGAAACCAAAACAACTTTCCATTTCTGGTTTTTAACATA  900
      | |||||||| ||||||| |||||||||| ||||||||  |||| |||||
seq2  A-TTTATTAA-GGAAACC-AAACAACTTT-CATTTCTG--TTTTTACATA  890

seq1  CAGCCAAGGGTCCCATTCTGACAAGTTAGGGGCAGGCAAGTGAAGGAGCC  950
      ||||||| |||||||||||||| ||||| ||||||   |||| ||||| |
seq2  CAGCCAA-GGTCCCATTCTGAC-AGTTA-GGGCAG--CAGTG-AGGAG-C  933

seq1  AACAGAGTTTTGAGGAAGAATATCCGTGATACAAAGGCAGACTTCAATTG  1000
       ||||||||||||||||| |||| |||||||||||||| |||||||||||
seq2  TACAGAGTTTTGAGGAAG-ATATTCGTGATACAAAGGC-GACTTCAATTG  981

seq1  GCTACTCAGGCTTAACTGCCGTGGGTCTCCAGCATGA-TCTCATGGGATA  1049
      |||||||| |||  ||||||||||||||||| ||||| |||| |||||||
seq2  GCTACTCA-GCT--ACTGCCGTGGGTCTCCACCATGATTCTC-TGGGATA  1027

seq1  CAGCTCATTAAGCGACTGTATGGAAACATAACAAAATTCATTTCATTTGA  1099
      ||||||||||||  ||||||||| |||||| ||||  ||| ||| |||||
seq2  CAGCTCATTAAGGCACTGTATGG-AACATACCAAA--TCACTTC-TTTGA  1073

seq1  GCATTATCCATTTCACATTTCCAC  1123
      ||| |||||||||| || ||||||
seq2  GCA-TATCCATTTC-CA-TTCCAC  1094

seq1: chr11_111560406_111561442
seq2: B6Ng01-049G22.g_68_1086 (reverse)

seq1  GTCTTCACCCACACACCTCATTGCCCTTCCATTGGTACAAGCCTTGTTCA  50
      |||||||||  ||| | ||||||||  | || ||||||||| ||||||||
seq2  GTCTTCACCACCAC-CTTCATTGCC--TTCAATGGTACAAG-CTTGTTCA  46

seq1  AGGCATTGTGATCCCATCCAATTTACATTAGTTAACAAGGCAGACGTGCC  100
      ||||| ||||||||||||||  ||||| ||||  ||||||||||||||||
seq2  AGGCA-TGTGATCCCATCCA--TTACA-TAGT--ACAAGGCAGACGTGCC  90

seq1  CTCTTTGTTCATAGAAAGATACAGTGAATCTTTGTCAACACACAGTTCTG  150
      |||||   |||||||||||||||||||||| ||||| |||||||||||||
seq2  CTCTT--GTCATAGAAAGATACAGTGAATC-TTGTC-ACACACAGTTCTG  136

seq1  ATTTTATTGCTTTTTGGACACTCTAATACAATATTTAGGTGAAATGGAAA  200
      |||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  ATTTTATTGC-TTTTGGACACTCTAATACAATA-TTAGGTGAAATGGAAA  184

seq1  TAATAGAAAATTTCATATTTTATGCCCTCCTTTGTGGTTTTTCTTTAAGT  250
      |||||| |||||||||||||||||||||||||||||| ||||||||||||
seq2  TAATAG-AAATTTCATATTTTATGCCCTCCTTTGTGG-TTTTCTTTAAGT  232

seq1  TGCAGGTTGGTATATTACTCCAAATATTAAAATTATTCAAACATAAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTTGGTATATTACTCCAAATATTAAAATTATTCAAACATAAACAG  282

seq1  ATATCATAGCACCACATAGAGACAGAAATATAAATTACATATACCCACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATAGCACCACATAGAGACAGAAATATAAATTACATATACCCACAT  332

seq1  GCTATTTAAGATATACTTTCACTTTAGAACTACACTTGGGACTTACATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTAAGATATACTTTCACTTTAGAACTACACTTGGGACTTACATTG  382

seq1  TGAAATAAAATAATTCTTGATTTATGACTCTTAATAAGAGGCTGATCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAAAATAATTCTTGATTTATGACTCTTAATAAGAGGCTGATCCTT  432

seq1  TCTTATAATAGTAGAGTTATTTATGCTGTTCCCTTGAAGACAGGAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAATAGTAGAGTTATTTATGCTGTTCCCTTGAAGACAGGAAAGTC  482

seq1  CTCCACAGGGAAGGAAGCCATTGATTTCCCTTTGGGGGGCCTTAAAAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAGGGAAGGAAGCCATTGATTTCCCTTTGGGGGGCCTTAAAAGTG  532

seq1  ATTTTCTACTTCATAAGCTAGTAAGAGACCCCCACGTACCCTGCTTTATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTACTTCATAAGCTAGTAAGAGACCCCCACGTACCCTGCTTTATC  582

seq1  CATCCTATGGTTATCTTCCCTTCAAAACCTATTGGATCCTTCCATGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTATGGTTATCTTCCCTTCAAAACCTATTGGATCCTTCCATGATTT  632

seq1  GTGACCCTGAAACCCTTTTTGACCCCTTCAACTTTGACTTTTTACTACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCTGAAACCCTTTTTGACCCCTTCAACTTTGACTTTTTACTACTC  682

seq1  TAACAGAACGATTTCCCATCCAACCAATGAGCAGGGGAGGGGTTGGAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGAACGATTTCCCATCCAACCAATGAGCAGGGGAGGGGTTGGAGGA  732

seq1  GGAAACATCGTGGAGGAGTGCTAAGGGTCCCTGACTTAGAAATCAGATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACATCGTGGAGGAGTGCTAAGGGTCCCTGACTTAGAAATCAGATAT  782

seq1  ATACTCAAAAATGTCTGATGGCTGAGCATTGCCAAAAGATTGGAAATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCAAAAATGTCTGATGGCTGAGCATTGCCAAAAGATTGGAAATGAA  832

seq1  GAGCATCTCCTTCCGAAGCAGAGGACGGTGTGGATCCAAAGAATCAATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCTCCTTCCGAAGCAGAGGACGGTGTGGATCCAAAGAATCAATAC  882

seq1  TTGCAATCTCTGTAATTTCAGAATGAATGCATCCTGTCACTGTTGCTGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAATCTCTGTAATTTCAGAATGAATGCATCCTGTCACTGTTGCTGAG  932

seq1  CCACCCGTGCTATTCCTGGGAAGGCAACAGATGTGTCAGGATGGAATCCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCGTGCTATTCCTGGGAAGGCAACAGATGTGTCAGGATGGAATCCA  982

seq1  ACTGTAGAATGCCAGTTTTTGAGAGCAGTGTGAATTC  1037
      |||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGAATGCCAGTTTTTGAGAGCAGTGTGAATTC  1019