BAC Information

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BAC

Clone NameB6Ng01-050B16
Chromosome6 (Build37)11 (Build37)
Map Location 18,835,442 - 18,835,96861,548,811 - 61,548,911
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050B16.bB6Ng01-050B16.g
ACCDH874156DH874157
length942420
definitionDH874156|Mus musculus domesticus DNA, BAC clone: B6Ng01-050B16, 5' end.DH874157|Mus musculus domesticus DNA, BAC clone: B6Ng01-050B16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(61,548,811 - 61,548,911)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgatggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaaactttggagtttta
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagcttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcaattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctactggtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttgttatcctaggttttttgttattccagatgaa
tttgcaaattgctccttctaattcgttgaagaattgagttggaattttga
tggggattgcattgaatcagtagattgcttttggcaagatagccattttt
acaatgttgatcctgccaatccatgggcatgggagatctttccatcttct
gagatcttctttaatttctttcttcagagatttgagttttatcatataga
tctttcacttccttagttagagtcacgccagatattttatat
cacctaagatcccgccctttgattcctgacagtttctttcttcccaggtt
tctggtgcattctgccctccccatcccccctgccccaacttcctctttcc
tgaggttgcctgtttccattcttcctgatggccttcagggcttcagtcct
ttgccctcacccaataccagatcaggttcccctctccaccctcactaacc
ctacatccttttccctcctaggtccctccctccctctccacctgtgatta
ctttcttcactctcccagtgagtctgaggcatccttacttgggtacttca
gcttattgacctttttgagttctgtggactgtatcttggttattcagggt
tttttgtttgtgttttgttgttgttgttgttgttttgttttgttttttgt
ttttgttttgggggtgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-050B16.b_45_572 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| |||| |||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATTGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAGCTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||| ||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATAAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACTGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCATCATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr11_61548811_61548911
seq2: B6Ng01-050B16.g_425_493 (reverse)

seq1  AAAACACCCCCAAAACAAACAAACAAACAAAACCTAAAAAGAACCCAAAA  50
      ||||||||||||||||||  ||||||  |||||   ||||     |||||
seq2  AAAACACCCCCAAAACAA--AAACAA--AAAAC---AAAA-----CAAAA  38

seq1  CAACAACAAGAATTTAATGTTTTATTAAAAACAAAACAAAATAAAACAAA  100
      |||||||||                 || |||||||||     |||||||
seq2  CAACAACAA----------------CAACAACAAAACA----CAAACAAA  68

seq1  A  101
      |
seq2  A  69