BAC Information

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BAC

Clone NameB6Ng01-050N15
Chromosome11 (Build37)
Map Location 12,924,459 - 13,035,481
singlet/doubletdoublet
Overlap genenone
Upstream geneGrb10, Cobl, LOC627244
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050N15.bB6Ng01-050N15.g
ACCDH874675DH874676
length1,0681,048
definitionDH874675|Mus musculus domesticus DNA, BAC clone: B6Ng01-050N15, 5' end.DH874676|Mus musculus domesticus DNA, BAC clone: B6Ng01-050N15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,034,386 - 13,035,481)(12,924,459 - 12,925,543)
sequence
gaattctcaactgaggaaactcaaatgactgagaagcacataaagaaatg
ttcaacatccttagtcatcagggaaatgcaaatcagtcacccctgacatt
ccaccttacaccagttagaatggctaaagtaaaacctcaagtgacagcag
atgctggcaaggatgtggagaaacaggaacactcctccattgctggtggg
aatgcaagcttgtacaaccactagggaaaccagtttggcactttctcaga
aaattggacataatattatctgagtactcagctatacccctcctgggcat
ctacccagaagatgctccaatatataataaggacacgtactctactatgt
tcatagcagccttatttataatagccaggagctggaaagaatccagatgt
ccctcaacagaggaatagatacagaaaatgtggtacatttacacaatgga
gcaatggagtactactcaggtactaaaagcaatgaatttatgaaattctt
aggcaaatgtatagaactacaaaaaattaattcttatgtaaaagactgcc
tttttttcagagcttataattgcatccatgttatctaaacaggaaggaat
ttacttattggatgtctttgccagtttcttctcagttgattcttggagtc
ttcttgtgtagttattggccaaaacaatgaattgaaagaaaagtcaaaaa
atttcaatgaagataaaatggaaggatattgtttcttttgagtctctcac
aagtgagatatgtatagattaaaatctactgcatcaaacactgtgtgaaa
tgagtgttactttcctggaagttcattattgaatatccacatttcattat
gttaccggcagatgggctttgggagtattaaatcataagtcttgatgagc
ttctttctgagggggtgttcttctgtcatcatgaggcaagaacagaactt
tctagaacagatgagcagccatcataacttccgattccagcttcgactgt
acaggccttattcagccatcacccaagaatcagaaaggtgctactccatg
ccggatggaggagtgtgt
gaattcattgatttttgagaagagaaataaaagagaataccaaggaaaga
ttaatctactggagaggggatatttcatgtcccagttccttattcatgat
aaagcgttgttctaaaccttaatgataattcatttcatatctgttgaaat
tttgccaaagggagggaaatgatttgtgtcacttgtttatttactcattt
tcagatagatctgggggtagattaatactgcacatttcttcctttggaaa
ccttgttaccttcctccaaattgctcacatcgctataattgcagagtgag
ttctttccaataaatctttccaagttgtaggaaaggaaattgattctgat
gctttctctgcttacccgagctgcccacagactctcttgctgtatccaac
aggtataaaagaaagtgctttgcagttccagcacacagaggacagtcgcg
ttaaaatttccaaaatcactgtgcagatttcttcaaactttgaactcttt
tctgagatgaagcattgggtcattcacatttcaatatccctatggcaagt
tatcatgtgagcagtactggtggacttaatctaattgtcccaagctttac
atttaaatgattggtttacataattaaccaccctttgccatttgcttccc
tttatagcattttgtgactgtgtttgtttgtgttaagtgaaggtatgcct
acctctgatccatttagtgcaagcaaagcctaattctcatttaccatgct
aattgctcttataaacaagcagagttgccttagtaacttctaggtgtatc
caagatggttgaacaaactgcattaaactgctcctattgtcagagtgata
tttaaattattactattgaggataactcactcagggctggatacccctaa
ctgtattttatttctcactcataattgctgactagatgtgcaatatctcc
caaggtaagtattcaaattggaatcattggaaagtttttttttttctttt
atgaaaagacatactgtaatgctaagagattagaattaaatttatgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_13034386_13035481
seq2: B6Ng01-050N15.b_66_1114 (reverse)

seq1  ACACAACTCCTCCATTCTGGGATTGGAGTAGCACCTGTCTTGATTCTTTT  50
      |||| |||||||||| |  ||  ||||||||||||| || ||||||||  
seq2  ACAC-ACTCCTCCATCC--GGCATGGAGTAGCACCTTTC-TGATTCTT--  44

seq1  GGGGTGATGGCTGATTAGAGGCCTGTACAGTTCTGAAGCTGTGAAATCTG  100
       ||||||||||||| || |||||||||||||   |||||  || |||| |
seq2  -GGGTGATGGCTGAATA-AGGCCTGTACAGT--CGAAGC--TGGAATCGG  88

seq1  AAAGTTTATGGAATGTGCTGCTCCCTTCCTGGTTTCTAGAAAGTATCTTG  150
      ||   |||||  ||| |||||||     |||  ||||||||||| |||  
seq2  AA--GTTATG--ATG-GCTGCTC---ATCTG--TTCTAGAAAGT-TCT--  125

seq1  TTTCTGTGCTCAATGATTGACAGGAAAGAACACCCCCTCAGAAAGAAGCT  200
       |||| |||   |||| ||||||  |||||||||||||||||||||||||
seq2  GTTCT-TGCCTCATGA-TGACAG--AAGAACACCCCCTCAGAAAGAAGCT  171

seq1  CATCAAGACTTTATGATTTAATTACTTCCCAAAGGCCCATCTGCCGGTAA  250
      ||||||||| ||||||||||| ||| ||||||| ||||||||||||||||
seq2  CATCAAGAC-TTATGATTTAA-TAC-TCCCAAA-GCCCATCTGCCGGTAA  217

seq1  CATAATGAAATGGTGGATATTTCAATAATGGAACTTCCAGGAAAAGTAAA  300
      ||||||||||| ||||||| ||||||||| ||||||||||| ||||| ||
seq2  CATAATGAAAT-GTGGATA-TTCAATAAT-GAACTTCCAGG-AAAGT-AA  262

seq1  CACTCATTTCACCACAGTGTTTGATGCAGTAGATTTTTAATCTATACATA  350
      ||||||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  CACTCATTTCA-CACAGTGTTTGATGCAGTAGA-TTTTAATCTATACATA  310

seq1  TTCTCACCTTGTTGAGAGACTCAAAAGAAAACAATATCCCTTCCATTTTT  400
       ||||| |||| ||||||||||||||| ||||||||| ||||||| ||||
seq2  -TCTCA-CTTG-TGAGAGACTCAAAAG-AAACAATAT-CCTTCCA-TTTT  354

seq1  ATCTTCATTGAAATTTTTTGACTTTTCTTTTCAATTCATTGTTTTGGCCA  450
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATCTTCATTGAAATTTTTTGACTTTTC-TTTCAATTCATTGTTTTGGCCA  403

seq1  ATAACTACACAAGAAGACTCCAAGAATCAACTGAGAAGAAACTGGCAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTACACAAGAAGACTCCAAGAATCAACTGAGAAGAAACTGGCAAAG  453

seq1  ACATCCAATAAGTAAATTCCTTCCTGTTTAGATAACATGGATGCAATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAATAAGTAAATTCCTTCCTGTTTAGATAACATGGATGCAATTAT  503

seq1  AAGCTCTGAAAAAAAGGCAGTCTTTTACATAAGAATTAATTTTTTGTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTGAAAAAAAGGCAGTCTTTTACATAAGAATTAATTTTTTGTAGT  553

seq1  TCTATACATTTGCCTAAGAATTTCATAAATTCATTGCTTTTAGTACCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACATTTGCCTAAGAATTTCATAAATTCATTGCTTTTAGTACCTGA  603

seq1  GTAGTACTCCATTGCTCCATTGTGTAAATGTACCACATTTTCTGTATCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTACTCCATTGCTCCATTGTGTAAATGTACCACATTTTCTGTATCTA  653

seq1  TTCCTCTGTTGAGGGACATCTGGATTCTTTCCAGCTCCTGGCTATTATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGTTGAGGGACATCTGGATTCTTTCCAGCTCCTGGCTATTATAA  703

seq1  ATAAGGCTGCTATGAACATAGTAGAGTACGTGTCCTTATTATATATTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCTGCTATGAACATAGTAGAGTACGTGTCCTTATTATATATTGGA  753

seq1  GCATCTTCTGGGTAGATGCCCAGGAGGGGTATAGCTGAGTACTCAGATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTCTGGGTAGATGCCCAGGAGGGGTATAGCTGAGTACTCAGATAA  803

seq1  TATTATGTCCAATTTTCTGAGAAAGTGCCAAACTGGTTTCCCTAGTGGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGTCCAATTTTCTGAGAAAGTGCCAAACTGGTTTCCCTAGTGGTT  853

seq1  GTACAAGCTTGCATTCCCACCAGCAATGGAGGAGTGTTCCTGTTTCTCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGCTTGCATTCCCACCAGCAATGGAGGAGTGTTCCTGTTTCTCCA  903

seq1  CATCCTTGCCAGCATCTGCTGTCACTTGAGGTTTTACTTTAGCCATTCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTGCCAGCATCTGCTGTCACTTGAGGTTTTACTTTAGCCATTCTA  953

seq1  ACTGGTGTAAGGTGGAATGTCAGGGGTGACTGATTTGCATTTCCCTGATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGTAAGGTGGAATGTCAGGGGTGACTGATTTGCATTTCCCTGATG  1003

seq1  ACTAAGGATGTTGAACATTTCTTTATGTGCTTCTCAGTCATTTGAG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGATGTTGAACATTTCTTTATGTGCTTCTCAGTCATTTGAG  1049

seq1: chr11_12924459_12925543
seq2: B6Ng01-050N15.g_70_1117

seq1  GAATTCATTGATTTTTGAGAAGAGAAATAAAAGAGAATACCAAGGAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGATTTTTGAGAAGAGAAATAAAAGAGAATACCAAGGAAAGA  50

seq1  TTAATCTACTGGAGAGGGGATATTTCATGTCCCAGTTCCTTATTCATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTACTGGAGAGGGGATATTTCATGTCCCAGTTCCTTATTCATGAT  100

seq1  AAAGCGTTGTTCTAAACCTTAATGATAATTCATTTCATATCTGTTGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCGTTGTTCTAAACCTTAATGATAATTCATTTCATATCTGTTGAAAT  150

seq1  TTTGCCAAAGGGAGGGAAATGATTTGTGTCACTTGTTTATTTACTCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAAAGGGAGGGAAATGATTTGTGTCACTTGTTTATTTACTCATTT  200

seq1  TCAGATAGATCTGGGGGTAGATTAATACTGCACATTTCTTCCTTTGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATAGATCTGGGGGTAGATTAATACTGCACATTTCTTCCTTTGGAAA  250

seq1  CCTTGTTACCTTCCTCCAAATTGCTCACATCGCTATAATTGCAGAGTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTACCTTCCTCCAAATTGCTCACATCGCTATAATTGCAGAGTGAG  300

seq1  TTCTTTCCAATAAATCTTTCCAAGTTGTAGGAAAGGAAATTGATTCTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCAATAAATCTTTCCAAGTTGTAGGAAAGGAAATTGATTCTGAT  350

seq1  GCTTTCTCTGCTTACCCGAGCTGCCCACAGACTCTCTTGCTGTATCCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTCTGCTTACCCGAGCTGCCCACAGACTCTCTTGCTGTATCCAAC  400

seq1  AGGTATAAAAGAAAGTGCTTTGCAGTTCCAGCACACAGAGGACAGTCGCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATAAAAGAAAGTGCTTTGCAGTTCCAGCACACAGAGGACAGTCGCG  450

seq1  TTAAAATTTCCAAAATCACTGTGCAGATTTCTTCAAACTTTGAACTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTTCCAAAATCACTGTGCAGATTTCTTCAAACTTTGAACTCTTT  500

seq1  TCTGAGATGAAGCATTGGGTCATTCACATTTCAATATCCCTATGGCAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGATGAAGCATTGGGTCATTCACATTTCAATATCCCTATGGCAAGT  550

seq1  TATCATGTGAGCAGTACTGGTGGACTTAATCTAATTGTCCCAAGCTTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGTGAGCAGTACTGGTGGACTTAATCTAATTGTCCCAAGCTTTAC  600

seq1  ATTTAAATGATTGGTTTACATAATTAACCACCCTTTGCCATTTGCTTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATGATTGGTTTACATAATTAACCACCCTTTGCCATTTGCTTCCC  650

seq1  TTTATAGCATTTTGTGACTGTGTTTGTTTTGTGTTAAGTGAAGGTATGCC  700
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTATAGCATTTTGTGACTGTGTTTG-TTTGTGTTAAGTGAAGGTATGCC  699

seq1  TACCTCTGATCCATTTAGTGCAAGCAAAGCCTAATTCTCATTTTACCATG  750
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TACCTCTGATCCATTTAGTGCAAGCAAAGCCTAATTCTCA-TTTACCATG  748

seq1  CTAATTGCTCTTATAAACAAGCAGAGTTGCCTTAGTAACTTCTAGGTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGCTCTTATAAACAAGCAGAGTTGCCTTAGTAACTTCTAGGTGTA  798

seq1  TTCCAAGATGGTTGAACAAACTGCATTAAACTGCTCCTA-TGTCAGAGTG  849
       |||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  -TCCAAGATGGTTGAACAAACTGCATTAAACTGCTCCTATTGTCAGAGTG  847

seq1  ATATTTAAAATTATTACTATTGAGGATAACTCACTTCAGGTGCTGGATAC  899
      |||||| ||||||||||||||||||||||||||| ||||| |||||||||
seq2  ATATTT-AAATTATTACTATTGAGGATAACTCAC-TCAGG-GCTGGATAC  894

seq1  CCCTAACTGTATTTTTATTTCCTTCAACTTCATAATTTTGCTGACATAAG  949
      ||||||||||| |||||||||  |||   ||||||  ||||||||   ||
seq2  CCCTAACTGTA-TTTTATTTC--TCA--CTCATAA--TTGCTGAC--TAG  935

seq1  ATGTGCAAATATCTCACAAAGTGTAAGTATTTTCAAATTTGAAATCATTT  999
      |||||| |||||||| |||   |||||||  |||||| ||| ||||| ||
seq2  ATGTGC-AATATCTCCCAA--GGTAAGTA--TTCAAA-TTGGAATCA-TT  978

seq1  GGAAAGTTTTTTTTTTTTACTCTTTATGAAAAAGACATATTACTGTAATG  1049
      |||||||||||||||||  || |||||| ||||||||   ||||||||||
seq2  GGAAAGTTTTTTTTTTT--CT-TTTATG-AAAAGACA---TACTGTAATG  1021

seq1  CAGAAGAGTAATTTTAGTATTTAAATTTTATATGAC  1085
      |  |||||     |||| | |||||||   ||||||
seq2  C-TAAGAG----ATTAG-AATTAAATT---TATGAC  1048