BAC Information

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BAC

Clone NameB6Ng01-053E01
Chromosome11 (Build37)
Map Location 18,593,827 - 18,769,011
singlet/doubletdoublet
Overlap genenone
Upstream geneEtaa1, LOC327871, LOC627696, LOC627716, LOC665796
Downstream geneMeis1, LOC635455, LOC100042708, Glns-ps1, LOC665868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053E01.bB6Ng01-053E01.g
ACCDH876356DH876357
length1,120656
definitionDH876356|Mus musculus domesticus DNA, BAC clone: B6Ng01-053E01, 5' end.DH876357|Mus musculus domesticus DNA, BAC clone: B6Ng01-053E01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,767,887 - 18,769,011)(18,593,827 - 18,594,480)
sequence
gaattctagaaaagaaaaataaaactccaaagaattttatcctttatagg
tctgcttttggtatctgggtaacaagaaacgagttttacaaaataagtga
attatttgatcacacattaagataaagagaatgtttaaaaactgtttgaa
aaaaatcactgcaagcctgttattgttaaagtaattaggtttccacaaat
taagagcgaaacaatattcacttcaaaataaggactttaaaaagaaatgg
tatattttgtaaagttgagtaaaatgtatggcacttttacaggtacttgt
aatatatctaataacttatgattttacctttaattctgtgtgtttgcctt
gctgtgtagaccagggtggtctggaacttgtggcaatcctgtcttctgtt
tcctgaaggcaggaattataggtgcgcaatcccacagctggcactattta
ctactttaaggtaagtttctataacattgtcccagctctgttctatgaca
cagaaaaggactgattcacataaaaaaattaaaaataatagtatatttat
gatgggagaaaatgatttcaaagaataacagcaagatgtaaatatgaaac
tataagagagtatacgtaaggtcttatttgtagttaaaaagttggaaaaa
ttaaaatgtgtgttgattcagcatccatactgctgatcacaaaaatcttg
agtgggttctaccaaacataagggatttgcacttgttttagcatagcaac
acataaaaatgaagaaaacaagccacagaaagaaaacaaacacatgaaac
aaacaagcaaacaaagaacagagctttgcaggtaaatttcttctcaacta
acaatctggatttttgtggattatacatgttaaatgttctgcatgacgca
gggtctcgatggctttgtggactttccataaatcatgaccatttccatgt
ctcacaggtcagagtgtctgattcatgtgtgctgtgatattttcctttgg
tttctaatagactaacagttcattattgcaaagcagtgccgagcatgggc
tatggaatcccattgtcaacaccttgcagtaatggcttctggacacaagg
cactctgggatgccttgtgg
gaattccaacctaaagagctactgacatctgatggttgttactaaagaga
tagtcagcattttttcaaggtacaccacctggtaggttgaccacgctaca
atggatggccatatacctgtacacacatggatcttactaactagactcag
tgggttatgaaaagttttaaaaataggacatgaagttgggatggtgatgt
ggggaaaatctgggagaacgggagagaggagttgatgatatgatcaaagt
atgtttatccaggtatgaaattctcaaataataaatttaaaatattgtgt
agatttttaaaatctttcttgctcacttcactggtcagagtaccaactct
ctctaacataaagaaagaagaaaaatatcctaccaaaagtatggaacaaa
aacatttatggatggcagaattgctgtcctttccaaattgaggttaggca
caacttctcaaacaggttaacttttaatgcttgctaaagcatgagtttta
atctaaaagaaacactatggagcccatagaggaacttcttaattataagc
agtttcaaagttgctctattgagtggatggatgttttgaacataacttta
caccaggtttttaaaacaattttaatgatacaagcccaatgagcctggaa
attttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_18767887_18769011
seq2: B6Ng01-053E01.b_43_1162 (reverse)

seq1  CCACAAGTGCATCCCAGGGTGCCTTGTGTCCAGAAGGCAATTACTGCAAG  50
      ||||||| ||||||||| ||||||||||||||||| || |||||||||||
seq2  CCACAAG-GCATCCCAGAGTGCCTTGTGTCCAGAA-GCCATTACTGCAAG  48

seq1  GTGGTAGACAATTGAGATCCCATAGCCCATGCTTCGGCACTGCTTTGCAA  100
      || || ||||| || ||| ||||||||||||| |||||||||||||||||
seq2  GT-GTTGACAA-TGGGATTCCATAGCCCATGC-TCGGCACTGCTTTGCAA  95

seq1  TAATGAACTGTTAGTCTATTAG-AATCAAAGGAAATTATCACAGCACACA  149
      |||||||||||||||||||||| || ||||||||| ||||||||||||||
seq2  TAATGAACTGTTAGTCTATTAGAAACCAAAGGAAAATATCACAGCACACA  145

seq1  TTGAATCAGACACTCTGACCTGTGAGACATGGAAATGGTCATGATTTATG  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TGAATCAGACACTCTGACCTGTGAGACATGGAAATGGTCATGATTTATG  194

seq1  GAAAGTCCACAAAGCCATCGAGACCCTGCGTCATGCAGAACATTTTACAT  249
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAAAGTCCACAAAGCCATCGAGACCCTGCGTCATGCAGAACATTTAACAT  244

seq1  GTATAATCCACAAAAATCCAGATTGTTAGTTGAGAAGAAATTTACCTGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATCCACAAAAATCCAGATTGTTAGTTGAGAAGAAATTTACCTGCA  294

seq1  AAGCTCTGTTCTTTGTTTGCTTGTTTGTTTCATGTGTTTGTTTTCTTTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTGTTCTTTGTTTGCTTGTTTGTTTCATGTGTTTGTTTTCTTTCT  344

seq1  GTGGCTTGTTTTCTTCATTTTTATGTGTTGCTATGCTAAAACAAGTGCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTTGTTTTCTTCATTTTTATGTGTTGCTATGCTAAAACAAGTGCAA  394

seq1  ATCCCTTATGTTTGGTAGAACCCACTCAAGATTTTTGTGATCAGCAGTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTATGTTTGGTAGAACCCACTCAAGATTTTTGTGATCAGCAGTAT  444

seq1  GGATGCTGAATCAACACACATTTTAATTTTTCCAACTTTTTAACTACAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTGAATCAACACACATTTTAATTTTTCCAACTTTTTAACTACAAA  494

seq1  TAAGACCTTACGTATACTCTCTTATAGTTTCATATTTACATCTTGCTGTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACCTTACGTATACTCTCTTATAGTTTCATATTTACATCTTGCTGTT  544

seq1  ATTCTTTGAAATCATTTTCTCCCATCATAAATATACTATTATTTTTAATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTGAAATCATTTTCTCCCATCATAAATATACTATTATTTTTAATT  594

seq1  TTTTTATGTGAATCAGTCCTTTTCTGTGTCATAGAACAGAGCTGGGACAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGTGAATCAGTCCTTTTCTGTGTCATAGAACAGAGCTGGGACAA  644

seq1  TGTTATAGAAACTTACCTTAAAGTAGTAAATAGTGCCAGCTGTGGGATTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAGAAACTTACCTTAAAGTAGTAAATAGTGCCAGCTGTGGGATTG  694

seq1  CGCACCTATAATTCCTGCCTTCAGGAAACAGAAGACAGGATTGCCACAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACCTATAATTCCTGCCTTCAGGAAACAGAAGACAGGATTGCCACAAG  744

seq1  TTCCAGACCACCCTGGTCTACACAGCAAGGCAAACACACAGAATTAAAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGACCACCCTGGTCTACACAGCAAGGCAAACACACAGAATTAAAGG  794

seq1  TAAAATCATAAGTTATTAGATATATTACAAGTACCTGTAAAAGTGCCATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCATAAGTTATTAGATATATTACAAGTACCTGTAAAAGTGCCATA  844

seq1  CATTTTACTCAACTTTACAAAATATACCATTTCTTTTTAAAGTCCTTATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTACTCAACTTTACAAAATATACCATTTCTTTTTAAAGTCCTTATT  894

seq1  TTGAAGTGAATATTGTTTCGCTCTTAATTTGTGGAAACCTAATTACTTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTGAATATTGTTTCGCTCTTAATTTGTGGAAACCTAATTACTTTA  944

seq1  ACAATAACAGGCTTGCAGTGATTTTTTTCAAACAGTTTTTAAACATTCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAACAGGCTTGCAGTGATTTTTTTCAAACAGTTTTTAAACATTCTC  994

seq1  TTTATCTTAATGTGTGATCAAATAATTCACTTATTTTGTAAAACTCGTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTAATGTGTGATCAAATAATTCACTTATTTTGTAAAACTCGTTT  1044

seq1  CTTGTTACCCAGATACCAAAAGCAGACCTATAAAGGATAAAATTCTTTGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTACCCAGATACCAAAAGCAGACCTATAAAGGATAAAATTCTTTGG  1094

seq1  AGTTTTATTTTTCTTTTCTAGAATTC  1125
      ||||||||||||||||||||||||||
seq2  AGTTTTATTTTTCTTTTCTAGAATTC  1120

seq1: chr11_18593827_18594480
seq2: B6Ng01-053E01.g_68_723

seq1  GAATTCCAACCTAAAGAGCTACTGACATCTGATGGTTGTTACTAAAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACCTAAAGAGCTACTGACATCTGATGGTTGTTACTAAAGAGA  50

seq1  TAGTCAGCATTTTTTCAAGGTACACCACCTGGTAGGTTGACCACGCTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAGCATTTTTTCAAGGTACACCACCTGGTAGGTTGACCACGCTACA  100

seq1  ATGGATGGCCATATACCTGTACACACATGGATCTTACTAACTAGACTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGGCCATATACCTGTACACACATGGATCTTACTAACTAGACTCAG  150

seq1  TGGGTTATGAAAAGTTTTAAAAATAGGACATGAAGTTGGGATGGTGATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTATGAAAAGTTTTAAAAATAGGACATGAAGTTGGGATGGTGATGT  200

seq1  GGGGAAAATCTGGGAGAACGGGAGAGAGGAGTTGATGATATGATCAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAATCTGGGAGAACGGGAGAGAGGAGTTGATGATATGATCAAAGT  250

seq1  ATGTTTATCCAGGTATGAAATTCTCAAATAATAAATTTAAAATATTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATCCAGGTATGAAATTCTCAAATAATAAATTTAAAATATTGTGT  300

seq1  AGATTTTTAAAATCTTTCTTGCTCACTTCACTGGTCAGAGTACCAACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTAAAATCTTTCTTGCTCACTTCACTGGTCAGAGTACCAACTCT  350

seq1  CTCTAACATAAAGAAAGAAGAAAAATATCCTACCAAAAGTATGGAACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAACATAAAGAAAGAAGAAAAATATCCTACCAAAAGTATGGAACAAA  400

seq1  AACATTTATGGATGGCAGAATTGCTGTCCTTTCCAAATTGAGGTTAGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTATGGATGGCAGAATTGCTGTCCTTTCCAAATTGAGGTTAGGCA  450

seq1  CAACTTCTCAAACAGGTTAACTTTTAATGCTTGCTAAAGCATGAG-TTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAACTTCTCAAACAGGTTAACTTTTAATGCTTGCTAAAGCATGAGTTTTA  500

seq1  ATCTAAAAGAAACACTATGGAGCCCATAGAGGAACTTCTTAATTATAAGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAAGAAACACTATGGAGCCCATAGAGGAACTTCTTAATTATAAGC  550

seq1  AGTTTCAAAGTTGCTCTATTGAGTGGATGGATGTTTTGAACATAACTTTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAAAGTTGCTCTATTGAGTGGATGGATGTTTTGAACATAACTTTA  600

seq1  CACCAGGTTTTTAAAACAA-TTTAATGATACAAGCCCAATGAGCCTGGAA  648
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CACCAGGTTTTTAAAACAATTTTAATGATACAAGCCCAATGAGCCTGGAA  650

seq1  ATTTTC  654
      ||||||
seq2  ATTTTC  656