BAC Information

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BAC

Clone NameB6Ng01-055G07
Chromosome11 (Build37)
Map Location 108,754,850 - 108,893,044
singlet/doubletdoublet
Overlap geneAxin2
Upstream geneCacng5, Prkca, Apoh, LOC100041381, Ccdc46, Olfr1397-ps1, LOC629945
Downstream geneE030025P04Rik, LOC194985, Rgs9, 1700096J18Rik, Gna13, 9930022D16Rik, X83328, Slc16a6, Arsg, Wipi1, Prkar1a, BC029169, 1700012B07Rik, 1700023C21Rik, LOC100041492, Abca8b, Abca8a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055G07.bB6Ng01-055G07.g
ACCDH877852DH877853
length468406
definitionDH877852|Mus musculus domesticus DNA, BAC clone: B6Ng01-055G07, 5' end.DH877853|Mus musculus domesticus DNA, BAC clone: B6Ng01-055G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,892,570 - 108,893,044)(108,754,850 - 108,755,261)
sequence
tctgcccagaacccatgcttcaaaagctggatgtgttggcatgaatctgt
aacccccactctggggagacggagacacatgtattccttgagtcttttac
tgagttgtaggccagtggaaaacgctgctcagaagaaagaaaagaagaac
agtgtgtgaggaacaatatccaaggttgacctgcacatggacaagcacag
atgtgctctctctctctctctctctctctctctctctcacacacacacac
acacacacacacacacagagagagagagagagagagagagagagagagag
agagagagagagagggtgtgatgtgcccacaagttagatgttatcgaatg
tctctattacaacattctccccacctctgatgcctctctgatttgaaggg
cagatgatgctaaggaggaggaatgttaatccaaactgacacagcagcgc
ctcctcaccaacaagttg
agatcaatgaagaggcacgccaagtggggaagcacctcttcctttttccg
tgggtggcggagggcctcagtcttcttgaaaacccacgtcacgtctgccc
tgaacctatctggggacagaggtgggaagcggactttaatgctcagggac
ttcccttctcctgcacatctgagatgtccctggttcccttcatagcatag
agcagcaggcctggtgaccaggccaacatctttatctctgggatgagaag
atagccagcaggccaaaatctttatcttatgaatgagaagctagtgtttc
aaacaggtgagaggactttgcctggagtgccaaaatcatcagcaaattgg
ttgcaatactagttccactctcacaagcagataaggtggggtgggggtag
tgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_108892570_108893044
seq2: B6Ng01-055G07.b_47_520 (reverse)

seq1  CAACTTGTTGGTGAGGAGGCGCTGCTGTGTCAGTTTGGATTAACATTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGTTGGTGAGGAGGCGCTGCTGTGTCAGTTTGGATTAACATTCCT  50

seq1  CCTCCTTAGCCTCCTCTGCCCTTCAAATCAGAGAGGCCTCAGAGGTGGGG  100
      |||||||||| || ||||||||||||||||||||||| ||||||||||||
seq2  CCTCCTTAGCATCATCTGCCCTTCAAATCAGAGAGGCATCAGAGGTGGGG  100

seq1  AGAATGTTGTCTATAGAGACATTTGATAACATCTAACTTGTGGGCACATC  150
      ||||||||||  ||||||||||| ||||||||||||||||||||||||||
seq2  AGAATGTTGT-AATAGAGACATTCGATAACATCTAACTTGTGGGCACATC  149

seq1  AAACCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  200
      | ||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  199

seq1  TCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAG  250
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAG  249

seq1  AGAGAGAGAGAGAGCACATCTGTGCTTGTCCATGTGCAGGTCAACCTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGCACATCTGTGCTTGTCCATGTGCAGGTCAACCTTGG  299

seq1  ATATTGTTCCTCACACACTGTTCTTCTTTTCTTTCTTCTGAGCAGCGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTTCCTCACACACTGTTCTTCTTTTCTTTCTTCTGAGCAGCGTTT  349

seq1  TCCACTGGCCTACAACTCAGTAAAAGACTCAAGGAATACATGTGTCTCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGGCCTACAACTCAGTAAAAGACTCAAGGAATACATGTGTCTCCG  399

seq1  TCTCCCCAGAGTGGGGGTTACAGATTCATGCCAACACATCCAGCTTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCAGAGTGGGGGTTACAGATTCATGCCAACACATCCAGCTTTTGA  449

seq1  AGCATGGGTTCTGGGCAGAGAATTC  475
      |||||||||||||||||||||||||
seq2  AGCATGGGTTCTGGGCAGAGAATTC  474

seq1: chr11_108754850_108755261
seq2: B6Ng01-055G07.g_68_479

seq1  GAATTCAGATCAATGAAGAGGCACGCCAAGTGGGGAAGCACCTCTTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATCAATGAAGAGGCACGCCAAGTGGGGAAGCACCTCTTCCTT  50

seq1  TTTCCGTGGGTGGCGGAGGGCCTCAGTCTTCTTGAAAACCCACGTCACGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCGTGGGTGGCGGAGGGCCTCAGTCTTCTTGAAAACCCACGTCACGT  100

seq1  CTGCCCTGAACCTATCTGGGGACAGAGGTGGGAAGCGGACTTTAATGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTGAACCTATCTGGGGACAGAGGTGGGAAGCGGACTTTAATGCTC  150

seq1  AGGGACTTCCCTTCTCCTGCACATCTGAGATGTCCCTGGTTCCCTTCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTTCCCTTCTCCTGCACATCTGAGATGTCCCTGGTTCCCTTCATA  200

seq1  GCATAGAGCAGCAGGCCTGGTGACCAGGCCAACATCTTTATCTCTGGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGAGCAGCAGGCCTGGTGACCAGGCCAACATCTTTATCTCTGGGAT  250

seq1  GAGAAGATAGCCAGCAGGCCAAAATCTTTATCTTATGAATGAGAAGCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGATAGCCAGCAGGCCAAAATCTTTATCTTATGAATGAGAAGCTAG  300

seq1  TGTTTCAAACAGGTGAGAGGACTTTGCCTGGAGTGCCAAAATCATCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAAACAGGTGAGAGGACTTTGCCTGGAGTGCCAAAATCATCAGCA  350

seq1  AATTGGTTGCAATACTAGTTCCACTCTCACAAGCAGATAAGGTGGGGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTTGCAATACTAGTTCCACTCTCACAAGCAGATAAGGTGGGGTGG  400

seq1  GGGTAGTGGGTG  412
      ||||||||||||
seq2  GGGTAGTGGGTG  412