BAC Information

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BAC

Clone NameB6Ng01-055M13
Chromosome11 (Build37)
Map Location 93,143,307 - 93,144,406
singlet/doubletsinglet
Overlap geneCar10
Upstream geneLOC382545, LOC100039286
Downstream geneLOC629636, Utp18, Mbtd1, Nme2, Nme1, Spag9, LOC100039431, LOC100039440, Tob1, Wfikkn2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055M13.bB6Ng01-055M13.g
ACCDH878135DH878136
length1,1551,103
definitionDH878135|Mus musculus domesticus DNA, BAC clone: B6Ng01-055M13, 5' end.DH878136|Mus musculus domesticus DNA, BAC clone: B6Ng01-055M13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaattcaaaacaacactgagat
tccactgcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatcccgcaatacctctcctgggc
atatatccagaagatgccccaaccggtaagaagaacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaatgaatttatgaaattcctaggcaaat
ggatggacctggagggtatcatcctgagtgaagtaacccaatcacaaagg
aactcgcacaatatgtactcactgataagtggatattagcccagaaactt
aggatacccaagatataagatacaacttgccaaacgcatgaaattcaaga
agaacgaagaccaaagtgtggacactttaccctttcttagaaatgggaac
aaaacacccatggaaggagttacagagacaaaatttggagctgtgacgaa
aggatggaccatctagtaattgccatatgcagggatccatcccataatca
gcttccaaatgctgacaccattgcatacactagcaagattttgctgaaag
gacccagatatagctctctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgatcacagtcagctattggatgggtcacacggccccaat
gaggagctagagaataccaagagctaaaggaactgcaaccctataggtgg
aacaacatatgaactacagtaccagagctcttgtcttagctgcatatgta
tcaaagatgctagtagcatcactgcaaaaggaggccatgacttgcaactt
aatagtctcagatcaggtaaccacaggcaaaaggggagttggttggtagg
ggatg
gcactaagtgggttttttttttccttcgtatcttttgacaacagtcccag
gaagtgagattgctaatccctgtgttaaatggcagaactaattggtgagg
ggagagatgcagcaactcagcttagaggagcttaactcccaccttcaaag
gtcccagaagccataatttaagagcctcagttccaccgtcttctgtgtca
gcccagagagagaccacatttgctcatgcagaatccaacactagaggaca
gagtcaggtgtgtgtcatcagttcttctttttcttcaaaggcaaaggaag
gcctagggtgggtgtctcagcagggacaggcactgcttctttcctagagc
catgaatccccaggcagctaatagtctgggccccaggactcaagatttcc
tgacacacaaaatgcagcttcttttaaacatcaatcatctttgggttttc
attgagattggagtagattccttagccaattaggataaaaatcagccaat
ttaataaatccctattaatttctcatgaccaagggcaaggatgaaagaga
attcttcttctcggtgtagtgagacttcccatgtctcctctttgccaatt
gctcaatatgactgctcatatttctctcctttcttagaaaggtaagttat
tcacctacatttcattttatacacacccagatcattccaactggtccaga
aatttggagagtgggtagtggtacacaatagatgttatttaccctttccc
tgcctgtgaaaagagagatgattttaaaaagttaaagcatttaacaaaat
ataatatatgcatgggtatgttttgtcccaaataattttttcattgtgaa
attactcatttgttaaaattcttggagcagccaatcctcatttgattgtt
tgacatatttataatgttaatcactatctaaagataagatctgatggtat
tggacacattcacagtagttggccttagactaaagacagttttctagcca
tatgttgactgttttcattcctctgtctacacagtattttcatattattt
tgagaccataattcatgttaacatggttatgtagctagtatttatgtaat
gac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_93143307_93144406
seq2: B6Ng01-055M13.g_82_1184

seq1  GCACTAAGTGGGTTTTTTTTTTCCTTCGTATCTTTTGACAACAGTCCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAAGTGGGTTTTTTTTTTCCTTCGTATCTTTTGACAACAGTCCCAG  50

seq1  GAAGTGAGATTGCTAATCCCTGTGTTAAATGGCAGAACTAATTGGTGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGAGATTGCTAATCCCTGTGTTAAATGGCAGAACTAATTGGTGAGG  100

seq1  GGAGAGATGCAGCAACTCAGCTTAGAGGAGCTTAACTCCCACCTTCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATGCAGCAACTCAGCTTAGAGGAGCTTAACTCCCACCTTCAAAG  150

seq1  GTCCCAGAAGCCATAATTTAAGAGCCTCAGTTCCACCGTCTTCTGTGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGAAGCCATAATTTAAGAGCCTCAGTTCCACCGTCTTCTGTGTCA  200

seq1  GCCCAGAGAGAGACCACATTTGCTCATGCAGAATCCAACACTAGAGGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGAGAGAGACCACATTTGCTCATGCAGAATCCAACACTAGAGGACA  250

seq1  GAGTCAGGTGTGTGTCATCAGTTCTTCTTTTTCTTCAAAGGCAAAGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGGTGTGTGTCATCAGTTCTTCTTTTTCTTCAAAGGCAAAGGAAG  300

seq1  GCCTAGGGTGGGTGTCTCAGCAGGGACAGGCACTGCTTCTTTCCTAGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGGGTGGGTGTCTCAGCAGGGACAGGCACTGCTTCTTTCCTAGAGC  350

seq1  CATGAATCCCCAGGCAGCTAATAGTCTGGGCCCCAGGACTCAAGATTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATCCCCAGGCAGCTAATAGTCTGGGCCCCAGGACTCAAGATTTCC  400

seq1  TGACACACAAAATGCAGCTTCTTTTAAACATCAATCATCTTTGGGTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACACAAAATGCAGCTTCTTTTAAACATCAATCATCTTTGGGTTTTC  450

seq1  ATTGAGATTGGAGTAGATTCCTTAGCCAATTAGGATAAAAATCAGCCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGATTGGAGTAGATTCCTTAGCCAATTAGGATAAAAATCAGCCAAT  500

seq1  TTAATAAATCCCTATTAATTTCTCATGACCAAGGGCAAGGATGAAAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAATCCCTATTAATTTCTCATGACCAAGGGCAAGGATGAAAGAGA  550

seq1  ATTCTTCTTCTCGGTGTAGTGAGACTTCCCATGTCTCCTCTTTGCCAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTTCTCGGTGTAGTGAGACTTCCCATGTCTCCTCTTTGCCAATT  600

seq1  GCTCAATATGACTGCTCATATTTCTCTCCTTTCTTAGAAAGGTAAGTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAATATGACTGCTCATATTTCTCTCCTTTCTTAGAAAGGTAAGTTAT  650

seq1  TCACCTACATTTCATTTTATACACACCCAGATCATTCCAACTGGTCCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTACATTTCATTTTATACACACCCAGATCATTCCAACTGGTCCAGA  700

seq1  AATTTGGAGAGTGGGTAGTGGTACACAATAGATGTTATTTACCCTTTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGAGAGTGGGTAGTGGTACACAATAGATGTTATTTACCCTTTCCC  750

seq1  TGCCTGTGAAAAGAGAGATGATTTTAAAAAGTTAAAGCAATTTAACAAAA  800
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGCCTGTGAAAAGAGAGATGATTTTAAAAAGTTAAAGC-ATTTAACAAAA  799

seq1  TATAATATATGCAT-GGTATGTTTTGTCCCAAATAATTTTTTCATTGTGA  849
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TATAATATATGCATGGGTATGTTTTGTCCCAAATAATTTTTTCATTGTGA  849

seq1  AATTACTCA-TTGTTAAAA-TCTTGGAGCAGCCAAT-CTCATTTGAATGT  896
      ||||||||| ||||||||| |||||||||||||||| ||||||||| |||
seq2  AATTACTCATTTGTTAAAATTCTTGGAGCAGCCAATCCTCATTTGATTGT  899

seq1  TTGAACATATTTATAATGTTAATCACTATCTAAAGATAAGATCTGATGGT  946
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTG-ACATATTTATAATGTTAATCACTATCTAAAGATAAGATCTGATGGT  948

seq1  ATTGGACACATTCACAGTAGTTTGGCCTTAGACTAAAGACAG-TTTCTAG  995
      |||||||||||||||||||| ||||||||||||||||||||| |||||||
seq2  ATTGGACACATTCACAGTAG-TTGGCCTTAGACTAAAGACAGTTTTCTAG  997

seq1  CCATATGTTGACTGTTTTCATT-CTCTGTCCTACACAGTA-TTTCATAT-  1042
      |||||||||||||||||||||| |||||| |||||||||| |||||||| 
seq2  CCATATGTTGACTGTTTTCATTCCTCTGT-CTACACAGTATTTTCATATT  1046

seq1  -ATTTGAGACAATATTCCATGTTAACAATGGTTATGTAGCTAGAATTTAT  1091
        |||||||| ||| | ||||||||| |||||||||||||||| ||||||
seq2  ATTTTGAGACCATAATTCATGTTAAC-ATGGTTATGTAGCTAGTATTTAT  1095

seq1  GTTAATGAC  1100
      | |||||||
seq2  G-TAATGAC  1103