BAC Information

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BAC

Clone NameB6Ng01-056L16
Chromosome11 (Build37)
Map Location 50,265,058 - 50,383,445
singlet/doubletdoublet
Overlap genenone
Upstream geneOlfr1387, Olfr1386, Olfr1385, Olfr1549-ps1, Olfr1384, Olfr1383, Olfr1382, GA_x5J8B7TT7LR-4113-3651, Olfr1381, Olfr1380, Flt4, LOC100040032, Scgb3a1, Cnot6, LOC666899, LOC100040073, Gfpt2, Mapk9, Rasgef1c, Rnf130, LOC380696, Tbc1d9b, 3010026O09Rik, Sqstm1, Mgat4b, Ltc4s, Maml1, Canx, 1700121K02Rik, Hnrph1, Rufy1
Downstream geneAdamts2, Zfp354c, 9630041N07Rik, Grm6, Zfp454, Zfp2, Zfp354b, Prop1, Olfr1379-ps1, Olfr1378, Olfr1377, Olfr226-ps1, Olfr51, Olfr54, Olfr1375-ps1, Zfp354a, LOC100040275, LOC382518, Olfr1374-ps1, 5133400J02Rik, LOC622699, BC049762, Clk4, Col23a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056L16.bB6Ng01-056L16.g
ACCDH878798DH878799
length270966
definitionDH878798|Mus musculus domesticus DNA, BAC clone: B6Ng01-056L16, 5' end.DH878799|Mus musculus domesticus DNA, BAC clone: B6Ng01-056L16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,265,058 - 50,265,327)(50,382,686 - 50,383,445)
sequence
taagagaatttgtctgtactaggggtgaagctcagtagagagctgagagc
ctagtgtgtgtggctccattagtttgagctacacacacacacacacacac
acatcgagggagatagagatgaaagggggagagagatatggatggaagga
gagagagaggagagagagagagagagagagtgttttggtcatatagtata
actatctcaattttggtacttcttagctagcatgatttttttatattcta
ttataaagacaaggtctcac
gaattcctctccatagggggctcccagcatctctcacccaactatttagg
taagactgaagtttggacctttgaattgttgttggattgagtttcaggga
actttaagatggaatgaacattgtttgcattaaagagagatgtgaatcat
gggtcttgaagggttttttccccaagtgttgactgaatgtccaatgtgac
taaagggtagggtctttaagaagcagataagccatagagttccttcctta
tgagcaaaagctcaagaaatcagagatgttgaaaataccatttgcaatat
tttttaaaacaaaaacattggaatatctctagtcaaggaaggaaaaaaaa
aactttcagtgaacatttcaaaacaccacagaaagaaatcgaagaagatg
ggagaagaaggacaggtgcagactagacagaatcaatattgtaaaactgg
ttgccttactaaacacgctctgcagatccagtgcagcccccaccacaacc
ccaatgatagtcttcacaggaatataaacactaatcctaaaattcctata
aaagcacaaaagacccccagtggacaaagcaacactgagcaaaaggagca
gtgctgaggttagcagcgcaccggaattcaggttatactgcagagccata
ataacaaaaccagcatggttctggctccaacgtggatgcacagatcaacg
gatagaataaaagacccccatgtaagcccacacatctgaagctatgtgat
tcctaacaaagatgccaaaaatatacactggagaaaagacactatttgat
gcaggggacactggatatccgctatagaagaacgctataactagatccct
gtctcatcctgaaagaaatcagctctaatggatcaaagagaagaaaacat
ggcaaaccttctagacataggcacacaggggtggactcgctggtggttta
ggataaaccagtaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_50265058_50265327
seq2: B6Ng01-056L16.b_54_323

seq1  TAAGAGAATTTGTCTGTACTAGGGGTGATGCTCAGTAGAGAGCTGAGAGC  50
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAAGAGAATTTGTCTGTACTAGGGGTGAAGCTCAGTAGAGAGCTGAGAGC  50

seq1  CTAGTGTGTGTGGCTCCATTAGTTTGAGCTACACACACACACACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGTGTGTGGCTCCATTAGTTTGAGCTACACACACACACACACACAC  100

seq1  ACATCGAGGGAGATAGAGATGAAAGGGGGAGAGAGATATGGATGGAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGAGGGAGATAGAGATGAAAGGGGGAGAGAGATATGGATGGAAGGA  150

seq1  GAGAGAGAGGAGAGAGAGAGAGAGAGAGAGTGTTTTGGTCATATAGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGGAGAGAGAGAGAGAGAGAGAGTGTTTTGGTCATATAGTATA  200

seq1  ACTATCTCAATTTAGGCACTTCTTAGCTAGCATGATTTTTATATATTCTA  250
      ||||||||||||| || ||||||||||||||||||||||| |||||||||
seq2  ACTATCTCAATTTTGGTACTTCTTAGCTAGCATGATTTTTTTATATTCTA  250

seq1  TTATAAAGACAAGGTCTCAC  270
      ||||||||||||||||||||
seq2  TTATAAAGACAAGGTCTCAC  270

seq1: chr11_50382686_50383445
seq2: B6Ng01-056L16.g_68_827 (reverse)

seq1  TTTGTTAGGAATCACATAGCTTCAGATGTGTGGGCTTACATGGGGGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAGGAATCACATAGCTTCAGATGTGTGGGCTTACATGGGGGTCTT  50

seq1  TTATTCTATCCGTTGATCTGTGCATCCACGTTGGAGCCAGAACCATGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTATCCGTTGATCTGTGCATCCACGTTGGAGCCAGAACCATGCTG  100

seq1  GTTTTGTTATTATGGCTCTGCAGTATAACCTGAATTCCGGTGCGCTGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTATTATGGCTCTGCAGTATAACCTGAATTCCGGTGCGCTGCTA  150

seq1  ACCTCAGCACTGCTCCTTTTGCTCAGTGTTGCTTTGTCCACTGGGGGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGCACTGCTCCTTTTGCTCAGTGTTGCTTTGTCCACTGGGGGTCT  200

seq1  TTTGTGCTTTTATAGGAATTTTAGGATTAGTGTTTATATTCCTGTGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCTTTTATAGGAATTTTAGGATTAGTGTTTATATTCCTGTGAAGA  250

seq1  CTATCATTGGGGTTGTGGTGGGGGCTGCACTGGATCTGCAGAGCGTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATTGGGGTTGTGGTGGGGGCTGCACTGGATCTGCAGAGCGTGTTT  300

seq1  AGTAAGGCAACCAGTTTTACAATATTGATTCTGTCTAGTCTGCACCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGCAACCAGTTTTACAATATTGATTCTGTCTAGTCTGCACCTGTC  350

seq1  CTTCTTCTCCCATCTTCTTCGATTTCTTTCTGTGGTGTTTTGAAATGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTCCCATCTTCTTCGATTTCTTTCTGTGGTGTTTTGAAATGTTC  400

seq1  ACTGAAAGTTTTTTTTTTCCTTCCTTGACTAGAGATATTCCAATGTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAAGTTTTTTTTTTCCTTCCTTGACTAGAGATATTCCAATGTTTTT  450

seq1  GTTTTAAAAAATATTGCAAATGGTATTTTCAACATCTCTGATTTCTTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAAAAATATTGCAAATGGTATTTTCAACATCTCTGATTTCTTGAG  500

seq1  CTTTTGCTCATAAGGAAGGAACTCTATGGCTTATCTGCTTCTTAAAGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCTCATAAGGAAGGAACTCTATGGCTTATCTGCTTCTTAAAGACC  550

seq1  CTACCCTTTAGTCACATTGGACATTCAGTCAACACTTGGGGAAAAAACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTTTAGTCACATTGGACATTCAGTCAACACTTGGGGAAAAAACCC  600

seq1  TTCAAGACCCATGATTCACATCTCTCTTTAATGCAAACAATGTTCATTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGACCCATGATTCACATCTCTCTTTAATGCAAACAATGTTCATTCC  650

seq1  ATCTTAAAGTTCCCTGAAACTCAATCCAACAACAATTCAAAGGTCCAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAAGTTCCCTGAAACTCAATCCAACAACAATTCAAAGGTCCAAAC  700

seq1  TTCAGTCTTACCTAAATAGTTGGGTGAGAGATGCTGGGAGCCCCCTATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCTTACCTAAATAGTTGGGTGAGAGATGCTGGGAGCCCCCTATGG  750

seq1  AGAGGAATTC  760
      ||||||||||
seq2  AGAGGAATTC  760