BAC Information

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BAC

Clone NameB6Ng01-058K15
Chromosome11 (Build37)
Map Location 17,623,384 - 17,753,927
singlet/doubletdoublet
Overlap genenone
Upstream geneEgfr, 2810442I21Rik, A630050E13Rik, Plek, 1500041B16Rik, LOC100042644, Ppp3r1, Pno1, AI553587, C1d, LOC382486, EG665748
Downstream geneEtaa1, LOC327871, LOC627696, LOC627716, LOC665796
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058K15.bB6Ng01-058K15.g
ACCDH880179DH880180
length1,086850
definitionDH880179|Mus musculus domesticus DNA, BAC clone: B6Ng01-058K15, 5' end.DH880180|Mus musculus domesticus DNA, BAC clone: B6Ng01-058K15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(17,752,820 - 17,753,927)(17,623,384 - 17,624,233)
sequence
gaattctccagtaaattaaattcaaactccgttttatccattcccccctg
ccccccacctcctgaaacttgtagaaagtaactctgtaaggaattgggat
ccagctctttgaactttaactactcccaggaccatgatcagcaggacaaa
ggggaaaaaacatgctcagcaaaggaagaaaattggtcagttttctctag
gcctgctagctttccttagtattcaaggaaggcaggttctatatacacag
aaaagtgagggcattgttttgaaactgtttcaagtctagcagttgaaacc
cggagatctctgttaccaaagataatgtaggtgcgactaatactttccga
ggtacctgggctttatgcatgaattgagcatgctctgatggcttggactc
aatccctgtgaccagcaacagtcaacaaaagacaaagggaagcaatttaa
ccaaggttaacccatggaatcctttgcttggcaacgagacgattcctttg
ttggattggtcattctgccattagcttttctgtaaaccccttcagtctgg
ctgtgaccttgtaactgacctctcctctcaccacggccttcacaagtaac
tcatccgaaggcttaatgggaggcagaaaaatctagagccctcctcagga
gctccaaaaacgtagttccaccagactcactccatttgcaacgtgatggt
cccaggggcatccttgtttttctaaaatattttccttttatttatataaa
cttgaaaatgtttacaacaattcccaaacctgtttcatgattttccctgg
attgccacactgaaaacattttccatacaccttcaaagactggactaaaa
aaaaattttttttttatcttaatttgacttttctttcacattactaggga
gtggaaccagtttccataattagaggaggcatattgacccatcattactc
tgactgttggttccataatgtgcatgtggaaagtgtttttcaaactgcac
cagtaatgtgagaatttttatcgaggcaaaattactacgtgactagtatg
gatgatttaaataaaataagttctttaaatctcctt
gaattcaacttcaaggattatgctgttaatcagtcccaccctaatttcca
tcaagggtcttaagcataaaacctaaagatgttttaagtcagttaggaat
gttcactatttcactgaagagcaaagtgaccagaaatacacatgacaagt
agtgggtggggaaggaaaagcaaacaccttttcaggatgtgcacatcatc
tttcatcttccatgaaagactatcaatacatctttatcatttccacggac
actgagctgaaagcttccaagtgctgcctttcatgctgctgtgaagtaaa
cagagattcaatggtatacttgagaacaatctggggctggttggtaaatt
ggatgtggctgacagggccaagaagcccaagggagccagctttcatagcc
ttccactttaagaatatgcaaatggagaatcaattttccattgcgtagtt
aaggaaattgtgtttttttaactttttttaatctatgagatgaaggaaac
acaaagaggcagggtaggtttttcatctgttcttgaaacttcactactta
agcctctaatttaaactggcaggagagtgaaatcaagcaagcttggacat
tctcggcagtccattgtcacaatcattacttttgattcatcctgctttca
gcatctagttctatatctctgttgtccaattctctgtttctcaaattttg
gccaaagtttcaagaattgctttggattgtccttttttaatgtatttatg
tgtatgtatgcacaaagtacatgtgtacttgtgtctgtgtgcatatatat
atatatatatatgtacactctgtgtgtgtgtgttgtgtgtgtgtgtgtgt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_17752820_17753927
seq2: B6Ng01-058K15.b_49_1134 (reverse)

seq1  AAGGAGATTTTTTAAAAGAAACTTTTATTTTATTTTAAAAATTCATCCAA  50
      ||||||||||    ||||||    |||||||||||    || ||||||| 
seq2  AAGGAGATTT----AAAGAA---CTTATTTTATTT----AAATCATCCA-  38

seq1  TAACTAGTCACGTAGTAAATATTTTGCCTCTGATAAAAATTCTCACATTT  100
        |||||||||||||||   |||||||||| |||||||||||||||| ||
seq2  -TACTAGTCACGTAGTA---ATTTTGCCTC-GATAAAAATTCTCACA-TT  82

seq1  ACTTGGTGCAGTTTGAAAAACACCTTTCACATGCACATTAATGGAACCAA  150
      || |||||||||||||||||||| || |||||||||||| ||||||||||
seq2  AC-TGGTGCAGTTTGAAAAACACTTTCCACATGCACATT-ATGGAACCAA  130

seq1  CAGTCAGAGTAATTGATGGGTCAATATGCCTCCTCTAATTATGGAAACTG  200
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGAGTAA-TGATGGGTCAATATGCCTCCTCTAATTATGGAAACTG  179

seq1  GTTCCACTCCCTAGTAATGTGAAAGAAAAGTCAAATTAAGATAAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCACTCCCTAGTAATGTGAAAGAAAAGTCAAATTAAGATAAAAAAAA  229

seq1  AATTTTTTTTTTAGTCCAGTCTTTGAAGGTGTATGGAAAATGTTTTCAGT  300
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-TTTTTTTTTAGTCCAGTCTTTGAAGGTGTATGGAAAATGTTTTCAGT  278

seq1  GTGGCAATCCAGGGAAAATCATGAAACAGGTTTGGGAATTGTTGTAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAATCCAGGGAAAATCATGAAACAGGTTTGGGAATTGTTGTAAACA  328

seq1  TTTTCAAGTTTATATAAATAAAAGGAAAATATTTTAGAAAAACAAGGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAGTTTATATAAATAAAAGGAAAATATTTTAGAAAAACAAGGATG  378

seq1  CCCCTGGGACCATCACGTTGCAAATGGAGTGAGTCTGGTGGAACTACGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGGACCATCACGTTGCAAATGGAGTGAGTCTGGTGGAACTACGTT  428

seq1  TTTGGAGCTCCTGAGGAGGGCTCTAGATTTTTCTGCCTCCCATTAAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGCTCCTGAGGAGGGCTCTAGATTTTTCTGCCTCCCATTAAGCCT  478

seq1  TCGGATGAGTTACTTGTGAAGGCCGTGGTGAGAGGAGAGGTCAGTTACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGATGAGTTACTTGTGAAGGCCGTGGTGAGAGGAGAGGTCAGTTACAA  528

seq1  GGTCACAGCCAGACTGAAGGGGTTTACAGAAAAGCTAATGGCAGAATGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACAGCCAGACTGAAGGGGTTTACAGAAAAGCTAATGGCAGAATGAC  578

seq1  CAATCCAACAAAGGAATCGTCTCGTTGCCAAGCAAAGGATTCCATGGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCAACAAAGGAATCGTCTCGTTGCCAAGCAAAGGATTCCATGGGTT  628

seq1  AACCTTGGTTAAATTGCTTCCCTTTGTCTTTTGTTGACTGTTGCTGGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGGTTAAATTGCTTCCCTTTGTCTTTTGTTGACTGTTGCTGGTCA  678

seq1  CAGGGATTGAGTCCAAGCCATCAGAGCATGCTCAATTCATGCATAAAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATTGAGTCCAAGCCATCAGAGCATGCTCAATTCATGCATAAAGCC  728

seq1  CAGGTACCTCGGAAAGTATTAGTCGCACCTACATTATCTTTGGTAACAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACCTCGGAAAGTATTAGTCGCACCTACATTATCTTTGGTAACAGA  778

seq1  GATCTCCGGGTTTCAACTGCTAGACTTGAAACAGTTTCAAAACAATGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCCGGGTTTCAACTGCTAGACTTGAAACAGTTTCAAAACAATGCCC  828

seq1  TCACTTTTCTGTGTATATAGAACCTGCCTTCCTTGAATACTAAGGAAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTTCTGTGTATATAGAACCTGCCTTCCTTGAATACTAAGGAAAGC  878

seq1  TAGCAGGCCTAGAGAAAACTGACCAATTTTCTTCCTTTGCTGAGCATGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGGCCTAGAGAAAACTGACCAATTTTCTTCCTTTGCTGAGCATGTT  928

seq1  TTTTCCCCTTTGTCCTGCTGATCATGGTCCTGGGAGTAGTTAAAGTTCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCCTTTGTCCTGCTGATCATGGTCCTGGGAGTAGTTAAAGTTCAA  978

seq1  AGAGCTGGATCCCAATTCCTTACAGAGTTACTTTCTACAAGTTTCAGGAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGGATCCCAATTCCTTACAGAGTTACTTTCTACAAGTTTCAGGAG  1028

seq1  GTGGGGGGCAGGGGGGAATGGATAAAACGGAGTTTGAATTTAATTTACTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGGCAGGGGGGAATGGATAAAACGGAGTTTGAATTTAATTTACTG  1078

seq1  GAGAATTC  1108
      ||||||||
seq2  GAGAATTC  1086

seq1: chr11_17623384_17624233
seq2: B6Ng01-058K15.g_68_917

seq1  GAATTCAACTTCAAGGATTATGCTGTTAATCAGTCCCACCCTAATTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTCAAGGATTATGCTGTTAATCAGTCCCACCCTAATTTCCA  50

seq1  TCAAGGGTCTTAAGCATAAAACCTAAAGATGTTTTAAGTCAGTTAGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGTCTTAAGCATAAAACCTAAAGATGTTTTAAGTCAGTTAGGAAT  100

seq1  GTTCACTATTTCACTGAAGAGCAAAGTGACCAGAAATACACATGACAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTATTTCACTGAAGAGCAAAGTGACCAGAAATACACATGACAAGT  150

seq1  AGTGGGTGGGGAAGGAAAAGCAAACACCTTTTCAGGATGTGCACATCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTGGGGAAGGAAAAGCAAACACCTTTTCAGGATGTGCACATCATC  200

seq1  TTTCATCTTCCATGAAAGACTATCAATACATCTTTATCATTTCCACGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCTTCCATGAAAGACTATCAATACATCTTTATCATTTCCACGGAC  250

seq1  ACTGAGCTGAAAGCTTCCAAGTGCTGCCTTTCATGCTGCTGTGAAGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCTGAAAGCTTCCAAGTGCTGCCTTTCATGCTGCTGTGAAGTAAA  300

seq1  CAGAGATTCAATGGTATACTTGAGAACAATCTGGGGCTGGTTGGTAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATTCAATGGTATACTTGAGAACAATCTGGGGCTGGTTGGTAAATT  350

seq1  GGATGTGGCTGACAGGGCCAAGAAGCCCAAGGGAGCCAGCTTTCATAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGGCTGACAGGGCCAAGAAGCCCAAGGGAGCCAGCTTTCATAGCC  400

seq1  TTCCACTTTAAGAATATGCAAATGGAGAATCAATTTTCCATTGCGTAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTTTAAGAATATGCAAATGGAGAATCAATTTTCCATTGCGTAGTT  450

seq1  AAGGAAATTGTGTTTTTTTAACTTTTTTTAATCTATGAGATGAAGGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATTGTGTTTTTTTAACTTTTTTTAATCTATGAGATGAAGGAAAC  500

seq1  ACAAAGAGGCAGGGTAGGTTTTTCATCTGTTCTTGAAACTTCACTACTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAGGCAGGGTAGGTTTTTCATCTGTTCTTGAAACTTCACTACTTA  550

seq1  AGCCTCTAATTTAAACTGGCAGGAGAGTGAAATCAAGCAAGCTTGGACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTAATTTAAACTGGCAGGAGAGTGAAATCAAGCAAGCTTGGACAT  600

seq1  TCTCGGCAGTCCATTGTCACAATCATTACTTTTGATTCATCCTGCTTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGGCAGTCCATTGTCACAATCATTACTTTTGATTCATCCTGCTTTCA  650

seq1  GCATCTAGTTCTATATCTCTGTTGTCCAATTCTCTGTTTCTCAAA-TTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCATCTAGTTCTATATCTCTGTTGTCCAATTCTCTGTTTCTCAAATTTTG  700

seq1  GCCAAAGTTTCAAGAATTGCTTTGGATTGTCCTTTTTTAATGTATTTATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAGTTTCAAGAATTGCTTTGGATTGTCCTTTTTTAATGTATTTATG  750

seq1  TGTATGTATGCACAAAGTACATGTGTACTTGTGTCTGTGTGCATATATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTATGCACAAAGTACATGTGTACTTGTGTCTGTGTGCATATATAT  800

seq1  ATATATATATATGTACACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATATATATATATGTACACTCTGTGTGTGTGTGT-TGTGTGTGTGTGTGTG  849

seq1  T  850
      |
seq2  T  850