BAC Information

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BAC

Clone NameB6Ng01-063L17
Chromosome11 (Build37)
Map Location 61,963,266 - 61,964,176
singlet/doubletsinglet
Overlap geneSpecc1
Upstream geneUsp22, LOC668239, Aldh3a1, Aldh3a2, 4933429E10Rik, 1300013J15Rik, LOC100042602, LOC626150, Zfp179, Mfap4, Mapk7, 3110043A19Rik, Eppb9, Epn2, Grap, Slc5a10, 2310040C09Rik, Prpsap2, Ulk2, Akap10, D630015H07, LOC626325, LOC100041558
Downstream geneAdora2b, 2410012H22Rik, Ttc19, Ncor1, Pigl, Prr6, Ubb, Trpv2, 2410006H16Rik, BC046404, BC025076, Zfp287, LOC626482, LOC100042766, Zfp286, Trim16, Fbxw10, Fam18b, Cdrt4, Tekt3, Pmp22
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063L17.bB6Ng01-063L17.g
ACCDH883734DH883735
length1,144912
definitionDH883734|Mus musculus domesticus DNA, BAC clone: B6Ng01-063L17, 5' end.DH883735|Mus musculus domesticus DNA, BAC clone: B6Ng01-063L17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
tttaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctcggc
atttatccagaagatgccccaactggtaagaaggacacatgttccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtatggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcataccctagcaagattttattgaaa
ggacccagatgtagctatctcttctgaactatgccggggcctagcaacac
agaagtggatgctcacagtcagctaatggatggatcacaggctccaatgg
agagctagagaagaacccaggagctaaaggatctgcacctatagtggaca
catatgactacagtacctcggagctctgacttagctgcatttgtatcaag
atgctatcgcatcactgaaggaagcccatgacacgtacttgtatgcccag
tacaggacgcaaggcaaaaggggaagtgggtgtatagtgggact
gaattctcttaagaattctttattttaggggtctgtttctactttgatat
taagcatgaaatgtatgcttcccagtgatcctcataagtaaaattgtaga
atataattttcaaaaaatgtttttgaagtcagcatgtgaagcaaaagatt
cctaacaatttagccttataaggaaacatctgagatttcaccacgaagta
tgattactcgcactaaatcagattaaagaatttcccagagaggagctgga
agtatgattcaatggttaagaacagtggctactcttccaaagaaaccaga
ttctattcatagcacccatatggcagcttgctaccacctgtaactctagg
tacagaggatctgataatctcttctggcctccaaaggcagttggcatgcc
catggcacaaataatggatgcatggttaaaaccatccattcacataaaag
atttttaaaaacatatttgagagagagagaatgaatgagaatacacatga
atgaatactggcacctgtatgtcataattaggaaaacacagcttacataa
ttgtgctggctacttttatgtcaacttgacatgagctagagtcatttagg
aagagggtagctcccatgtaatttttaatgggttcttttttattgttgtt
tggctggtattcattttctcaatcgaatttatcactgttcttttagaatc
tatgtctaatagaatcaatatctgctaagcctgtttctgtttttctggtt
ttttggtttttggctttttttttaattgtggcttttagtcttccagtgtc
atctattctatgtgcctggaaatctatgaactgactaaaggactctgtat
ttgaaaacaaagatctatctatgccaggtggtggtggcatagcactcagg
agcaaagaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_61963266_61964176
seq2: B6Ng01-063L17.g_68_979 (reverse)

seq1  TGCCTC-TGCCTCCTGAGTGCTATGCCACCACCACCTGGCATAGATAGAT  49
      |||||| |  ||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTTTGCTCCTGAGTGCTATGCCACCACCACCTGGCATAGATAGAT  50

seq1  CTTTGTTTTCAAATACAGAGTCCTTTAGTCAGTTCATAGATTTCCAGGCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTTCAAATACAGAGTCCTTTAGTCAGTTCATAGATTTCCAGGCA  100

seq1  CATAGAATAGATGACACTGGAAGACTAAAAGCCACAATTAAAAAAAAAGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAATAGATGACACTGGAAGACTAAAAGCCACAATTAAAAAAAAAGC  150

seq1  CAAAAACCAAAAAACCAGAAAAACAGAAACAGGCTTAGCAGATATTGATT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACCAAAAAACCAGAAAAACAGAAACAGGCTTAGCAGATATTGATT  200

seq1  CTATTAGACATAGATTCTAAAAGAACAGTGATAAATTCGATTGAGAAAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAGACATAGATTCTAAAAGAACAGTGATAAATTCGATTGAGAAAAT  250

seq1  GAATACCAGCCAAACAACAATAAAAAAGAACCCATTAAAAATTACATGGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACCAGCCAAACAACAATAAAAAAGAACCCATTAAAAATTACATGGG  300

seq1  AGCTACCCTCTTCCTAAATGACTCTAGCTCATGTCAAGTTGACATAAAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACCCTCTTCCTAAATGACTCTAGCTCATGTCAAGTTGACATAAAAG  350

seq1  TAGCCAGCACAATTATGTAAGCTGTGTTTTCCTAATTATGACATACAGGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGCACAATTATGTAAGCTGTGTTTTCCTAATTATGACATACAGGT  400

seq1  GCCAGTATTCATTCATGTGTATTCTCATTCATTCTCTCTCTCTCAAATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTATTCATTCATGTGTATTCTCATTCATTCTCTCTCTCTCAAATAT  450

seq1  GTTTTTAAAAATCTTTTATGTGAATGGATGGTTTTAACCATGCATCCATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAAAAATCTTTTATGTGAATGGATGGTTTTAACCATGCATCCATT  500

seq1  ATTTGTGCCATGGGCATGCCAACTGCCTTTGGAGGCCAGAAGAGATTATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGCCATGGGCATGCCAACTGCCTTTGGAGGCCAGAAGAGATTATC  550

seq1  AGATCCTCTGTACCTAGAGTTACAGGTGGTAGCAAGCTGCCATATGGGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTCTGTACCTAGAGTTACAGGTGGTAGCAAGCTGCCATATGGGTG  600

seq1  CTATGAATAGAATCTGGTTTCTTTGGAAGAGTAGCCACTGTTCTTAACCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAATAGAATCTGGTTTCTTTGGAAGAGTAGCCACTGTTCTTAACCA  650

seq1  TTGAATCATACTTCCAGCTCCTCTCTGGGAAATTCTTTAATCTGATTTAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCATACTTCCAGCTCCTCTCTGGGAAATTCTTTAATCTGATTTAG  700

seq1  TGCGAGTAATCATACTTCGTGGTGAAATCTCAGATGTTTCCTTATAAGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAGTAATCATACTTCGTGGTGAAATCTCAGATGTTTCCTTATAAGGC  750

seq1  TAAATTGTTAGGAATCTTTTGCTTCACATGCTGACTTCAAAAACATTTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGTTAGGAATCTTTTGCTTCACATGCTGACTTCAAAAACATTTTT  800

seq1  TGAAAATTATATTCTACAATTTTACTTATGAGGATCACTGGGAAGCATAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATTATATTCTACAATTTTACTTATGAGGATCACTGGGAAGCATAC  850

seq1  ATTTCATGCTTAATATCAAAGTAGAAACAGACCCCTAAAATAAAGAATTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGCTTAATATCAAAGTAGAAACAGACCCCTAAAATAAAGAATTC  900

seq1  TTAAGAGAATTC  911
      ||||||||||||
seq2  TTAAGAGAATTC  912