BAC Information

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BAC

Clone NameB6Ng01-064G08
Chromosome11 (Build37)
Map Location 93,167,210 - 93,331,481
singlet/doubletdoublet
Overlap geneCar10
Upstream geneLOC382545, LOC100039286
Downstream geneLOC629636, Utp18, Mbtd1, Nme2, Nme1, Spag9, LOC100039431, LOC100039440, Tob1, Wfikkn2, 3300001P08Rik, Ankrd40, Abcc3, Cacna1g
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064G08.bB6Ng01-064G08.g
ACCDH884195DH884196
length1,017778
definitionDH884195|Mus musculus domesticus DNA, BAC clone: B6Ng01-064G08, 5' end.DH884196|Mus musculus domesticus DNA, BAC clone: B6Ng01-064G08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,167,210 - 93,168,199)(93,330,704 - 93,331,481)
sequence
gaattcaagagaaatgaaaaggcacttgcgtgcaaaaaaaaatgctaggg
ctgaaattatagacatttgttattcctggcagatccttctctagggttgg
actgtttgggctctgcccctcttcctcctctgaggtcttttacccatctg
caccaattcatttgtatgttatagttttacccttgctaatatattcgaac
atgttttctaccatgtcacttactcaacaaacgcacacgtgtgcacacac
acaccaaacactcatatacacataatttttctgtatagaaaaatcattat
tgcaagtgagattgagacaatttagctatgcagtttttggatgctctttt
aaaaaattatttgggagtcattttttcatagaaagcttctatctaggtta
cttggttgctctgattttaaagaaaaacaaaaccagactaggtgcagtgc
acatccctttacttccagcattcaggaggtagaagcagacagatctctgt
gagtttgaggctaacctggtctaaagagtgacttctaggacagccagggc
ttcacagagaaaccctgtcttgaaaagccaaaaattaattaactaaaagt
tttaaaagaaaataaaaacaaaaccattctaattgttcccctggcagttt
tatctcacgaactctaaaggaaagttaatatagctgggacacataccatg
cagtgtacaaactacttatttgatagatgcaaatgcttatgtttcttggt
caatgtttagaagtgaaagtttcagtttaaatagacattgaattatcttc
ttcttgttggagaggatgacaggggcataattgcatcctaggcaaacaat
aaaataaataaaacacccagtgcagatgatgcttggtgcttaggtttcat
aaaccaactggaaggtagccagccatgcaggagtaacctaaggccagagc
ttgtggtgagtggagaacagcgatgggatcagatacgagtctatgctgtg
aagaatggatatttcga
gaattctctcttgaaatgatttttaaatctataatagatcttacttagga
aagtgaaattgtagttagtttgaataataataataataataataataata
ataataattgaataataataattgtagttagtttgaataataattgtagt
tagttggaataattgatgtgaaaaggaaagtttctcatgaatcagcaggt
gtacaataataatttgctaactaagatgtgtttacttaaggtgagagatg
agtgttactgagtctaagcccctacttggggtccctaatgggtaatggct
gctgaggctcatctgtttgtcccacccttgaaaggagattcctgcttgtc
tagacattgtagaaggtgtctggcactcattttccacttacaaaaaaact
cttccttttagttatttttaaaactaaattcaactattgggcactgaatg
tttcaattcaagctcattgtatgtattgatttatacttgtaatattttta
tgaaggggacttaattatttcagttttataacatttctttctttctttcc
acgtgtgggtgtgtgtcagttttcttgttctactgggaatcaaactcagg
tcctcgggcttggaagcgagggcctttgcccactgaaccatcttgctggc
tctcatgtctgattttagaggtgtgcaaacggaggttctgagagtgtgca
tatgtaagagtgtgtattcaagtgcgttcatatgtgtatgaatgtgcatg
tgagtgtgcatatgtaagggtttgtatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_93167210_93168199
seq2: B6Ng01-064G08.b_45_1030

seq1  GAATTCAAGAGAAATGAAAAGGCACTTGCGTGCAAAAAAAAATGCTAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGAAATGAAAAGGCACTTGCGTGCAAAAAAAAATGCTAGGG  50

seq1  CTGAAATTATAGACATTTGTTATTCCTGGCAGATCCTTCTCTAGGGTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATTATAGACATTTGTTATTCCTGGCAGATCCTTCTCTAGGGTTGG  100

seq1  ACTGTTTGGGCTCTGCCCCTCTTCCTCCTCTGAGGTCTTTTACCCATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTGGGCTCTGCCCCTCTTCCTCCTCTGAGGTCTTTTACCCATCTG  150

seq1  CACCAATTCATTTGTATGTTATAGTTTTACCCTTGCTAATATATTCGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATTCATTTGTATGTTATAGTTTTACCCTTGCTAATATATTCGAAC  200

seq1  ATGTTTTCTACCATGTCACTTACTCAACAAACGCACACGTGTGCACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCTACCATGTCACTTACTCAACAAACGCACACGTGTGCACACAC  250

seq1  ACACCAAACACTCATATACACATAATTTTTCTGTATAGAAAAATCATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAAACACTCATATACACATAATTTTTCTGTATAGAAAAATCATTAT  300

seq1  TGCAAGTGAGATTGAGACAATTTAGCTATGCAGTTTTTGGATGCTCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGTGAGATTGAGACAATTTAGCTATGCAGTTTTTGGATGCTCTTTT  350

seq1  AAAAAATTATTTGGGAGTCATTTTTTCATAGAAAGCTTCTATCTAGGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTATTTGGGAGTCATTTTTTCATAGAAAGCTTCTATCTAGGTTA  400

seq1  CTTGGTTGCTCTGATTTTAAAGAAAAACAAAACCAGACTAGGTGCAGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTGCTCTGATTTTAAAGAAAAACAAAACCAGACTAGGTGCAGTGC  450

seq1  ACATCCCTTTACTTCCAGCATTCAGGAGGTAGAAGCAGACAGATCTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCTTTACTTCCAGCATTCAGGAGGTAGAAGCAGACAGATCTCTGT  500

seq1  GAGTTTGAGGCTAACCTGGTCTAAAGAGTGACTTCTAGGACAGCCAGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGAGGCTAACCTGGTCTAAAGAGTGACTTCTAGGACAGCCAGGGC  550

seq1  TTCACAGAGAAACCCTGTCTTGAAAAGCCAAAAATTAATTAACTAAAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGAGAAACCCTGTCTTGAAAAGCCAAAAATTAATTAACTAAAAGT  600

seq1  TTTAAAAGAAAATAAAAACAAAACCATTCTAATTGTTCCCCTGGCAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGAAAATAAAAACAAAACCATTCTAATTGTTCCCCTGGCAGTTT  650

seq1  TATCTCACGAACTCTAAAGGAAAGTTAATATAGCTGGGACACATACCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCACGAACTCTAAAGGAAAGTTAATATAGCTGGGACACATACCATG  700

seq1  CAGTGTACAAACTACTTATTTGATAGATGCAAATGCTTATGTTTCTTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTACAAACTACTTATTTGATAGATGCAAATGCTTATGTTTCTTGGT  750

seq1  CAATGTTTAGAAGTGAAAGTTTCAGTTTAAATAGACATTGAATTATCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTTAGAAGTGAAAGTTTCAGTTTAAATAGACATTGAATTATCTTC  800

seq1  TTCTTGTTGGAGAGGATGACAGGGGCATAATTGCATCCTAGGCAAACAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTTGGAGAGGATGACAGGGGCATAATTGCATCCTAGGCAAACAAT  850

seq1  AAAATAAATAAAACCACCCAGTGCAGAATGAGGCTTGGTGCTTAGGTTTC  900
      ||||||||||||| |||||||||||| |||| ||||||||||||||||||
seq2  AAAATAAATAAAA-CACCCAGTGCAG-ATGATGCTTGGTGCTTAGGTTTC  898

seq1  ATAAACCAACTGGAAGGTAGCCAGCCATGCAGGAGTAACCTAAGGCCAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCAACTGGAAGGTAGCCAGCCATGCAGGAGTAACCTAAGGCCAGA  948

seq1  GCTTGTGGGTGGAGTGGAGAACAGCGATGGGATCAGATAC  990
      ||||||||   |||||||||||||||||||||||||||||
seq2  GCTTGTGG--TGAGTGGAGAACAGCGATGGGATCAGATAC  986

seq1: chr11_93330704_93331481
seq2: B6Ng01-064G08.g_71_848 (reverse)

seq1  CATACACACCCTTACATATGCACACTCACATGCACATTCATACACATATG  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAAACCCTTACATATGCACACTCACATGCACATTCATACACATATG  50

seq1  AACGCACTTGAATACACACTCTTACATATGCACACTCTCAGAACCTCCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCACTTGAATACACACTCTTACATATGCACACTCTCAGAACCTCCGT  100

seq1  TTGCACACCTCTAAAATCAGACATGAGAGCCAGCAAGATGGTTCAGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACACCTCTAAAATCAGACATGAGAGCCAGCAAGATGGTTCAGTGGG  150

seq1  CAAAGGCCCTCGCTTCCAAGCCCGAGGACCTGAGTTTGATTCCCAGTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCCCTCGCTTCCAAGCCCGAGGACCTGAGTTTGATTCCCAGTAGA  200

seq1  ACAAGAAAACTGACACACACCCACACGTGGAAAGAAAGAAAGAAATGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAAACTGACACACACCCACACGTGGAAAGAAAGAAAGAAATGTTA  250

seq1  TAAAACTGAAATAATTAAGTCCCCTTCATAAAAATATTACAAGTATAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTGAAATAATTAAGTCCCCTTCATAAAAATATTACAAGTATAAAT  300

seq1  CAATACATACAATGAGCTTGAATTGAAACATTCAGTGCCCAATAGTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACATACAATGAGCTTGAATTGAAACATTCAGTGCCCAATAGTTGAA  350

seq1  TTTAGTTTTAAAAATAACTAAAAGGAAGAGTTTTTTTGTAAGTGGAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTTAAAAATAACTAAAAGGAAGAGTTTTTTTGTAAGTGGAAAAT  400

seq1  GAGTGCCAGACACCTTCTACAATGTCTAGACAAGCAGGAATCTCCTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCCAGACACCTTCTACAATGTCTAGACAAGCAGGAATCTCCTTTCA  450

seq1  AGGGTGGGACAAACAGATGAGCCTCAGCAGCCATTACCCATTAGGGACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGGACAAACAGATGAGCCTCAGCAGCCATTACCCATTAGGGACCC  500

seq1  CAAGTAGGGGCTTAGACTCAGTAACACTCATCTCTCACCTTAAGTAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAGGGGCTTAGACTCAGTAACACTCATCTCTCACCTTAAGTAAACA  550

seq1  CATCTTAGTTAGCAAATTATTATTGTACACCTGCTGATTCATGAGAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTAGTTAGCAAATTATTATTGTACACCTGCTGATTCATGAGAAACT  600

seq1  TTCCTTTTCACATCAATTATTCCAACTAACTACAATTATTATTCAAACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTCACATCAATTATTCCAACTAACTACAATTATTATTCAAACTA  650

seq1  ACTACAATTATTATTATTCAATTATTATTATTATTATTATTATTATTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAATTATTATTATTCAATTATTATTATTATTATTATTATTATTATT  700

seq1  ATTATTCAAACTAACTACAATTTCACTTTCCTAAGTAAGATCTATTATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCAAACTAACTACAATTTCACTTTCCTAAGTAAGATCTATTATAG  750

seq1  ATTTAAAAATCATTTCAAGAGAGAATTC  778
      ||||||||||||||||||||||||||||
seq2  ATTTAAAAATCATTTCAAGAGAGAATTC  778