BAC Information

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BAC

Clone NameB6Ng01-064K02
ChromosomeY (Build37)11 (Build37)
Map Location 573,321 - 573,3568,361,069 - 8,361,709
singlet/doubletsingletsinglet
Overlap geneUty
Upstream geneLOC100039202, Zfy1, Ube1y1, Rhoay-ps3, Jarid1d, Eif2s3y, Tspy-ps
Downstream geneDdx3y, LOC100042763, LOC385246, Usp9y, LOC100039278, EG667079, LOC667089, Rhoay-ps1, Zfy2, Ube1y1-ps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064K02.bB6Ng01-064K02.g
ACCDH884357DH884358
length500641
definitionDH884357|Mus musculus domesticus DNA, BAC clone: B6Ng01-064K02, 5' end.DH884358|Mus musculus domesticus DNA, BAC clone: B6Ng01-064K02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(573,321 - 573,356)(8,361,069 - 8,361,709)
sequence
gaattcctaggcaaatggatggacctggagggcatcatcctgagtgaggt
aacacaatgacaaaagaactcaaatgatatgtactcactgataagtggat
attagcccagaaacttagtatacctgaaatataacatacaatttgcaaaa
cacatgaaactgaagaagaacgaagaccaaagtgtggacactttgcccct
tcttagaattggaaacaatcacccatggaaggagttacagagacaaagta
tggagctgagacaaaaggatggaccatctaaagactgccatatccagaga
tccatcccataattagcctccaaacgatgacatcattgcatacactagca
agcgttggctgaaaggattctgatatagctgtctcttgtgagactaggcc
ggggcctagcaaacacataagtagatgctcacagtcagctattggatgga
gcacagggcccccaatggaggagctagagaaagtatccaaggagctaaag

gaattctaacccatggagctttgcacacagaaagaaggacaaaggtttac
tgaagagtgaagggtggaagcccaagaatcagcctgggatcctggtgcag
aaggaatgccatttcctccaggtgcagatgctaaggcaacaagcctcagc
cagtagctactgtctccgagcctgtgttttgaacacagtgcagctctcca
tggtgcagtcattagatacgaaaggtgctggtgtgagcagttgtcagttg
ttagaaagtctaagaggcctatggagtgccacacagactatgactactag
taacaagttggtattctatggaagacaggtaaaatgtgattagtttcagg
tgagattgcagccaaatttcacctcctgtggtctgtcccagagtaagaat
atatctttttgtttagtaggtttgaccaaagctgaggtcttgaggtaccg
ggtactcttggtattgtgtcctctgtagctacaatatcaggagttccagg
cagaggtacctttgcctagttaggggcttgcttgggaatctgtgcagtga
tgtttcggtttcaggaaggacgcaagaaacctgcaaactgcctgtggtcc
tgggtattttgtgtggagtgtgtgtgtgtgtgtgtgtgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrY_573321_573356
seq2: B6Ng01-064K02.b_507_542

seq1  ATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAG  36
      ||||||||||||||||||||| ||||||||||||||
seq2  ATGGAGGAGCTAGAGAAAGTATCCAAGGAGCTAAAG  36

seq1: chr11_8361069_8361709
seq2: B6Ng01-064K02.g_69_709 (reverse)

seq1  TCACACACACACACACACACACACTCCACACAAAATACCCAGGACCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACACACACACACACACACTCCACACAAAATACCCAGGACCACAG  50

seq1  GCAGTTTGCAGGTTTCTTGCGTCCTTCCTGAAACCGAAACATCACTGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTGCAGGTTTCTTGCGTCCTTCCTGAAACCGAAACATCACTGCAC  100

seq1  AGATTCCCAAGCAAGCCCCTAACTAGGCAAAGGTACCTCTGCCTGGAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCCCAAGCAAGCCCCTAACTAGGCAAAGGTACCTCTGCCTGGAACT  150

seq1  CCTGATATTGTAGCTACAGAGGACACAATACCAAGAGTACCCGGTACCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATATTGTAGCTACAGAGGACACAATACCAAGAGTACCCGGTACCTC  200

seq1  AAGACCTCAGCTTTGGTCAAACCTACTAAACAAAAAGATATATTCTTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTCAGCTTTGGTCAAACCTACTAAACAAAAAGATATATTCTTACT  250

seq1  CTGGGACAGACCACAGGAGGTGAAATTTGGCTGCAATCTCACCTGAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGACAGACCACAGGAGGTGAAATTTGGCTGCAATCTCACCTGAAACT  300

seq1  AATCACATTTTACCTGTCTTCCATAGAATACCAACTTGTTACTAGTAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACATTTTACCTGTCTTCCATAGAATACCAACTTGTTACTAGTAGTC  350

seq1  ATAGTCTGTGTGGCACTCCATAGGCCTCTTAGACTTTCTAACAACTGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTGTGTGGCACTCCATAGGCCTCTTAGACTTTCTAACAACTGACA  400

seq1  ACTGCTCACACCAGCACCTTTCGTATCTAATGACTGCACCATGGAGAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCACACCAGCACCTTTCGTATCTAATGACTGCACCATGGAGAGCT  450

seq1  GCACTGTGTTCAAAACACAGGCTCGGAGACAGTAGCTACTGGCTGAGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTGTTCAAAACACAGGCTCGGAGACAGTAGCTACTGGCTGAGGCT  500

seq1  TGTTGCCTTAGCATCTGCACCTGGAGGAAATGGCATTCCTTCTGCACCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCCTTAGCATCTGCACCTGGAGGAAATGGCATTCCTTCTGCACCAG  550

seq1  GATCCCAGGCTGATTCTTGGGCTTCCACCCTTCACTCTTCAGTAAACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCAGGCTGATTCTTGGGCTTCCACCCTTCACTCTTCAGTAAACCTT  600

seq1  TGTCCTTCTTTCTGTGTGCAAAGCTCCATGGGTTAGAATTC  641
      |||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTCTTTCTGTGTGCAAAGCTCCATGGGTTAGAATTC  641