BAC Information

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BAC

Clone NameB6Ng01-065C05
Chromosome11 (Build37)
Map Location 10,928,866 - 10,929,668
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382483
Downstream geneVwc2, Zpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065C05.bB6Ng01-065C05.g
ACCDH884705DH884706
length1,281952
definitionDH884705|Mus musculus domesticus DNA, BAC clone: B6Ng01-065C05, 5' end.DH884706|Mus musculus domesticus DNA, BAC clone: B6Ng01-065C05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagactttcaaagaagaactattgcctccactcatcaaatt
attacaaaaagtagaaactgaaggaacatttctgaaattatttctggagc
cactatcaccctgataatcaagtcacagaaggactcaacaaaaagagaag
tatgtcttctgggacaaaaaaaggccagaaaagcaaagaattgaagaaga
aagaattcaggtaagggaaccaaagatactgtttgatcaggctctatttg
tggtattttttctagtagctacctaaactatatataaaaagcagtggtta
tagaaatcaaaattccttatgaacatagatgcaaaaatttatctaaatac
taaaatactaaaaatacttgtaagctaaattaaagaacaatctgtcttag
tcaggggtctattactgtaaagagacactgtaatcacagcaactcttatt
aaagatttaatatgggttagctttcaatttcagaggtttagtccattttc
atcatgacaagaaagcatggtgacacacaggctgaagtggtattgaagaa
gtggctgagagctctttatctggatcagcaggcatcagaaagtgtgtgac
cagaggacctggcttgagcatttgaaaccccaaattccacctatccccag
tgatacacatctctcaacaaggccatacctcttaatcccttatcaagtag
caccacaccctaatgaccaagcattcaaatatatgagtctatgggggcca
ttcctattctagccaccacaacacataaaaggttatccacaatgatcaac
gtaactttacctcagagatttagagatggtttaccatacataaattaata
aatataatccaacacataggcatagtaaaaggaaagaaatggtcatatca
ttagatgcaaaaaaaactttgcaaaaagtagagaagaggcatgcataata
aagcaattataatcaacccagagctggcatcctcaaagcagatagaactt
catgcctttatatgaaatcagaaagaacagaatgctcattgtatctgtgc
tattcagtataatactgaagcttagtagaagtaataagacaactgaaggc
aatcagaggataagatagaagaaagatccagtatatcttggcagagttga
aatatgttaaagacaataaactctagaggactcctaactgcaacaagcca
caagtacaatcagtacctgatcagtgccataatacacacacaaactggag
aaacgtgacaggcctcaaatctcccctccta
gaattcaaaaacaaggcaatttgatcatgacaataaaagatgactttggc
ttgataatgtcacttatatttaatccagattttaacaggaaagatccatg
tcaatgagtcagtgcagggtctcgataaatgaatgtaaaaggcataattt
aaatgataactaggaaactgttagagcttactttggtgtactgagtgtca
ttacatattctagatggcttgatgtaatgtaaagtgtattagttacagca
agacaataattagaagtaaaatctatattaacaggagaagaagaaacaag
tctaattgtaagttattaaaacttagaactatggttctatggaagggatt
gttaatagaacaaaaacactagctatagtttatgagaaggtatttcccaa
acatgcatttaaagtgtaaaaaattcataaaatccaacaataaagatcaa
acattcaaattggaaaatgcataaaatatgtgagtagtgaccttgccaaa
gtcttattatagtagcaaataaacataaggagattttcaacatcctttgt
caccagagaactgcaaacatgattatgtacttaaaagatggctacattcc
aaaaactctgacaaaaccaaatgttgtttagtatgtaggagaagtggaac
actcatttattttgagtggaaatgctaataaaacagctactttatggttt
tgctgttattttacaaagctcaacacagcctcaccacagagtccagcaat
aactttattcaggttactatctaattttgttttggttttttatttgctga
tacttgctgtttagtggtaacttattcaagtgatttgctaacttctcttc
atacaaacatttatattaagaagcttacagaagattttgtgggtgacctc
taactgctgttaaccaagatactcttgataaattatatgaatgacaaaca
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_10928866_10929668
seq2: B6Ng01-065C05.g_68_870 (reverse)

seq1  GTATCAGCAAATAAAAAACCAAAACAAAATTAGATAGTAACCTGAATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAGCAAATAAAAAACCAAAACAAAATTAGATAGTAACCTGAATAAA  50

seq1  GTTATTGCTGGACTCTGTGGTGAGGCTGTGTTGAGCTTTGTAAAATAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGCTGGACTCTGTGGTGAGGCTGTGTTGAGCTTTGTAAAATAACA  100

seq1  GCAAAACCATAAAGTAGCTGTTTTATTAGCATTTCCACTCAAAATAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACCATAAAGTAGCTGTTTTATTAGCATTTCCACTCAAAATAAATG  150

seq1  AGTGTTCCACTTCTCCTACATACTAAACAACATTTGGTTTTGTCAGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCCACTTCTCCTACATACTAAACAACATTTGGTTTTGTCAGAGTT  200

seq1  TTTGGAATGTAGCCATCTTTTAAGTACATAATCATGTTTGCAGTTCTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATGTAGCCATCTTTTAAGTACATAATCATGTTTGCAGTTCTCTG  250

seq1  GTGACAAAGGATGTTGAAAATCTCCTTATGTTTATTTGCTACTATAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAAAGGATGTTGAAAATCTCCTTATGTTTATTTGCTACTATAATAA  300

seq1  GACTTTGGCAAGGTCACTACTCACATATTTTATGCATTTTCCAATTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGGCAAGGTCACTACTCACATATTTTATGCATTTTCCAATTTGAA  350

seq1  TGTTTGATCTTTATTGTTGGATTTTATGAATTTTTTACACTTTAAATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGATCTTTATTGTTGGATTTTATGAATTTTTTACACTTTAAATGCA  400

seq1  TGTTTGGGAAATACCTTCTCATAAACTATAGCTAGTGTTTTTGTTCTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGGAAATACCTTCTCATAAACTATAGCTAGTGTTTTTGTTCTATT  450

seq1  AACAATCCCTTCCATAGAACCATAGTTCTAAGTTTTAATAACTTACAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCCCTTCCATAGAACCATAGTTCTAAGTTTTAATAACTTACAATT  500

seq1  AGACTTGTTTCTTCTTCTCCTGTTAATATAGATTTTACTTCTAATTATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGTTTCTTCTTCTCCTGTTAATATAGATTTTACTTCTAATTATTG  550

seq1  TCTTGCTGTAACTAATACACTTTACATTACATCAAGCCATCTAGAATATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTGTAACTAATACACTTTACATTACATCAAGCCATCTAGAATATG  600

seq1  TAATGACACTCAGTACACCAAAGTAAGCTCTAACAGTTTCCTAGTTATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACACTCAGTACACCAAAGTAAGCTCTAACAGTTTCCTAGTTATCA  650

seq1  TTTAAATTATGCCTTTTACATTCATTTATCGAGACCCTGCACTGACTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTATGCCTTTTACATTCATTTATCGAGACCCTGCACTGACTCAT  700

seq1  TGACATGGATCTTTCCTGTTAAAATCTGGATTAAATATAAGTGACATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGGATCTTTCCTGTTAAAATCTGGATTAAATATAAGTGACATTAT  750

seq1  CAAGCCAAAGTCATCTTTTATTGTCATGATCAAATTGCCTTGTTTTTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAAAGTCATCTTTTATTGTCATGATCAAATTGCCTTGTTTTTGAA  800

seq1  TTC  803
      |||
seq2  TTC  803