BAC Information

Click to search

BAC

Clone NameB6Ng01-065P10
Chromosome11 (Build37)
Map Location 67,082,033 - 67,197,442
singlet/doubletdoublet
Overlap geneMyh8, Myh13
Upstream geneGm879, LOC668323, A530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4
Downstream geneGas7, Rcvrn, Glp2r, LOC544792, Dhrs7c, LOC100041899, Usp43, Wdr16, Stx8, Ntn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065P10.bB6Ng01-065P10.g
ACCDH885285DH885286
length1,060990
definitionDH885285|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P10, 5' end.DH885286|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,196,371 - 67,197,442)(67,082,033 - 67,083,029)
sequence
gaattccttcccattgaggctcacgagagaaactaacccgtaactcttac
cttgacatcagaatgatattggcctcatgagaaaaactgattggcattgt
tgctctctgggaactcttggctaagactggaattattctttcccttaatt
gttttcctctcacaggtgcctgaagctacaaaataggacaatctcggttt
gaatgtttcagtgtgtcttacaccatgtcttcctagagccgcaagtggtc
cttcatgggtcaccttagcgattaactgctgagtagagctcgtgtctgac
taatcatttctgagtttcctaatgctaggagtaatggggatacaggagct
tctatatgctggttgtttcttcggccagtggataggtagtccttgtaaca
tcgtagcatatggcatggtgggcataactgtctatgtgcatggtgaaaag
tgagaggcttgaaattgttcaaagccacgggcttgaatccccacaaccta
gcagctaaactcatacctactacaaagctatttactgaatccttgaagag
caatgtcagtaccatgttctgataaatgcttcttattttgtgtccaggaa
tcttcctccatctctttcttctctctttagttttgacatttgcagcccct
tcagtgacatggatcaaaacgcccacagtcatctgtttgggagcacaggg
tgtgatacttctcctgacacttatagataggtttttctcaagctgtattt
caagaaaggaagggagaaaaggtttcctgtccttttcctgaaccatgctg
ggacgctgtcttcacctgtttactaatgttaggagagggatggaaggagg
catctgccctgtttcccagggctctgtccacagcagcttcttcagtgtcc
tgctgaaagacactgaagtcctatggttttggtgggtcctattattgtat
ttacttgaataggaaacaaacagaatttttaaaattaatttactgaaata
gaactatttggtcagatgtggtacatgtatatgggggtggattctgttga
gagcctgttt
gaattctccatgtagattaggctggcctagaactcacagacgtctacctg
gctctgcctcccaagtgctagtattaaaggcaagtgccaccatacctagc
tgtttttatttttattagtttacactaacaatacaaagttaggcgtttca
ttatgacttagccataccagctagtggattcataaatgttagatgtgaga
taaggtaaatcaggaaggttgaaaatacgagtaggagaaaaagcagtttg
tatatgtgctaccaaagtgtaaaggcaaagatagtatgactgacatgaga
ggaaaatagaattcaaagcaaaacagtgcaaaacacgtacagtccattcc
tgtttgttttttttttaaatgcaatctaccatgaagatatagcaagcaga
aatttctatacggttaacaaatgtctttgagctaaataagccaatgtaac
gaatctgtcataaacatatggaggactttaaacttatacccagtagaaaa
taatagaccaaatatccccaagacacagataacttcagtttaacaattat
aaagtaaatgtggggggttgggaggtggctcagctgttaactatactcat
tgttctttccagaggactggagctcagatccccagaacccctgacaggta
gctggctctcatctgcctgtaactgcagctttaaaggagctgacaccctc
tgcggaacaccacaggtatctttacaaactcctgcagacactcacgctcg
attcataagcaaaataaatcttttcaaaagtaaataataaagcttttgta
gcactaataagagaattaaacgcttcccttatctgatatacagttcacta
agcatggtactgacttcatgaaaggatgtgaaagttatttcctggaagga
taaaaagaatctagaattaaacagttggtgttctgccctacttcagagct
cactacttgaaaaatttattagttagtattaatttctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_67196371_67197442
seq2: B6Ng01-065P10.b_43_1102 (reverse)

seq1  AAACAGGGCTCTCAACCAGAAATCCAACCCCATATACATGTTACCACATC  50
      ||||| ||||||||| ||| |||||| ||||||||||||| |||||||||
seq2  AAACA-GGCTCTCAA-CAG-AATCCACCCCCATATACATG-TACCACATC  46

seq1  TGACCAAATAGTTCTATTTCAAGTAAATTAATTTTTAAAAATTTCTGTTT  100
      |||||||||||||||||||| ||||||||||||||  |||| ||||| ||
seq2  TGACCAAATAGTTCTATTTC-AGTAAATTAATTTT--AAAAATTCTG-TT  92

seq1  TGTTTCCTATTCAAGTAAATACCAATAATAGGACCCACCAAAACCATAGG  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGTTTCCTATTCAAGTAAATA-CAATAATAGGACCCACCAAAACCATAGG  141

seq1  ACCTTCAGTGTCTTTCAGCAGGACACTGAAGAAGCCTGCTGTGGACAGAG  200
      | |||||||||||||||||||||||||||||||| |||||||||||||||
seq2  A-CTTCAGTGTCTTTCAGCAGGACACTGAAGAAG-CTGCTGTGGACAGAG  189

seq1  CCCTGGGACACAGGGCAGATGCCTCCTTCCATCCCTCTCCTAACATTAGT  250
      |||||||| |||||||||||||||||||||||||||||||||||||||| 
seq2  CCCTGGGAAACAGGGCAGATGCCTCCTTCCATCCCTCTCCTAACATTAG-  238

seq1  TAAACAGGTGAAGACAGCGTCCCAGCATGGTTCAGGAAAAGGACAGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGGTGAAGACAGCGTCCCAGCATGGTTCAGGAAAAGGACAGGAAA  288

seq1  CCTTTTCTCCCTTCCTTTCTTGAAATACAGCTTGAGAAAAACCTATCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCTCCCTTCCTTTCTTGAAATACAGCTTGAGAAAAACCTATCTAT  338

seq1  AAGTGTCAGGAGAAGTATCACACCCTGTGCTCCCAAACAGATGACTGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCAGGAGAAGTATCACACCCTGTGCTCCCAAACAGATGACTGTGG  388

seq1  GCGTTTTGATCCATGTCACTGAAGGGGCTGCAAATGTCAAAACTAAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTTTGATCCATGTCACTGAAGGGGCTGCAAATGTCAAAACTAAAGAG  438

seq1  AGAAGAAAGAGATGGAGGAAGATTCCTGGACACAAAATAAGAAGCATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAGAGATGGAGGAAGATTCCTGGACACAAAATAAGAAGCATTTA  488

seq1  TCAGAACATGGTACTGACATTGCTCTTCAAGGATTCAGTAAATAGCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACATGGTACTGACATTGCTCTTCAAGGATTCAGTAAATAGCTTTG  538

seq1  TAGTAGGTATGAGTTTAGCTGCTAGGTTGTGGGGATTCAAGCCCGTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGTATGAGTTTAGCTGCTAGGTTGTGGGGATTCAAGCCCGTGGCT  588

seq1  TTGAACAATTTCAAGCCTCTCACTTTTCACCATGCACATAGACAGTTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAATTTCAAGCCTCTCACTTTTCACCATGCACATAGACAGTTATG  638

seq1  CCCACCATGCCATATGCTACGATGTTACAAGGACTACCTATCCACTGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCATGCCATATGCTACGATGTTACAAGGACTACCTATCCACTGGCC  688

seq1  GAAGAAACAACCAGCATATAGAAGCTCCTGTATCCCCATTACTCCTAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAACAACCAGCATATAGAAGCTCCTGTATCCCCATTACTCCTAGCA  738

seq1  TTAGGAAACTCAGAAATGATTAGTCAGACACGAGCTCTACTCAGCAGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAACTCAGAAATGATTAGTCAGACACGAGCTCTACTCAGCAGTTA  788

seq1  ATCGCTAAGGTGACCCATGAAGGACCACTTGCGGCTCTAGGAAGACATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCTAAGGTGACCCATGAAGGACCACTTGCGGCTCTAGGAAGACATGG  838

seq1  TGTAAGACACACTGAAACATTCAAACCGAGATTGTCCTATTTTGTAGCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGACACACTGAAACATTCAAACCGAGATTGTCCTATTTTGTAGCTT  888

seq1  CAGGCACCTGTGAGAGGAAAACAATTAAGGGAAAGAATAATTCCAGTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACCTGTGAGAGGAAAACAATTAAGGGAAAGAATAATTCCAGTCTT  938

seq1  AGCCAAGAGTTCCCAGAGAGCAACAATGCCAATCAGTTTTTCTCATGAGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGAGTTCCCAGAGAGCAACAATGCCAATCAGTTTTTCTCATGAGG  988

seq1  CCAATATCATTCTGATGTCAAGGTAAGAGTTACGGGTTAGTTTCTCTCGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATCATTCTGATGTCAAGGTAAGAGTTACGGGTTAGTTTCTCTCGT  1038

seq1  GAGCCTCAATGGGAAGGAATTC  1072
      ||||||||||||||||||||||
seq2  GAGCCTCAATGGGAAGGAATTC  1060

seq1: chr11_67082033_67083029
seq2: B6Ng01-065P10.g_68_1057

seq1  GAATTCTCCATGTAGATTAGGCTGGCCTAGAACTCACAGACGTCTACCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATGTAGATTAGGCTGGCCTAGAACTCACAGACGTCTACCTG  50

seq1  GCTCTGCCTCCCAAGTGCTAGTATTAAAGGCAAGTGCCACCATACCTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCCTCCCAAGTGCTAGTATTAAAGGCAAGTGCCACCATACCTAGC  100

seq1  TGTTTTTATTTTTATTAGTTTACACTAACAATACAAAGTTAGGCGTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTATTTTTATTAGTTTACACTAACAATACAAAGTTAGGCGTTTCA  150

seq1  TTATGACTTAGCCATACCAGCTAGTGGATTCATAAATGTTAGATGTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACTTAGCCATACCAGCTAGTGGATTCATAAATGTTAGATGTGAGA  200

seq1  TAAGGTAAATCAGGAAGGTTGAAAATACGAGTAGGAGAAAAAGCAGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTAAATCAGGAAGGTTGAAAATACGAGTAGGAGAAAAAGCAGTTTG  250

seq1  TATATGTGCTACCAAAGTGTAAAGGCAAAGATAGTATGACTGACATGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGCTACCAAAGTGTAAAGGCAAAGATAGTATGACTGACATGAGA  300

seq1  GGAAAATAGAATTCAAAGCAAAACAGTGCAAAACACGTACAGTCCATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAGAATTCAAAGCAAAACAGTGCAAAACACGTACAGTCCATTCC  350

seq1  TGTTTGTTTTTTTTTTAAATGCAATCTACCATGAAGATATAGCAAGCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTTTTTTTTAAATGCAATCTACCATGAAGATATAGCAAGCAGA  400

seq1  AATTTCTATACGGTTAACAAATGTCTTTGAGCTAAATAAGCCAATGTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTATACGGTTAACAAATGTCTTTGAGCTAAATAAGCCAATGTAAC  450

seq1  GAATCTGTCATAAACATATGGAGGACTTTAAACTTATACCCAGTAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGTCATAAACATATGGAGGACTTTAAACTTATACCCAGTAGAAAA  500

seq1  TAATAGACCAAATATCCCCAAGACACAGATAACTTCAGTTTAACAATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGACCAAATATCCCCAAGACACAGATAACTTCAGTTTAACAATTAT  550

seq1  AAAGTAAATGTGGGGGGTTGGGAGGTGGCTCAGCTGTTAACTATACTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAATGTGGGGGGTTGGGAGGTGGCTCAGCTGTTAACTATACTCAT  600

seq1  TGTTC-TTCCAGAGGACTGGAGCTCAGATCCCCAGAACCCCTGACAGGTA  649
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTCCAGAGGACTGGAGCTCAGATCCCCAGAACCCCTGACAGGTA  650

seq1  GCTGGCTCTCATCTGCCTGTAACTGCAGCTTTAAAGGAGCTGACACCCTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTCTCATCTGCCTGTAACTGCAGCTTTAAAGGAGCTGACACCCTC  700

seq1  TGCGGAACACCACAGGTATCTTTACAAACTCCTGCAGACACTCACGCTCG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGAACACCACAGGTATCTTTACAAACTCCTGCAGACACTCACGCTCG  750

seq1  TATTCATAAGCAAAATAAATCTTTTCAAAAAGTAAAT-ATAAAGC-TTTG  797
       ||||||||||||||||||||||||| |||||||||| ||||||| ||||
seq2  -ATTCATAAGCAAAATAAATCTTTTC-AAAAGTAAATAATAAAGCTTTTG  798

seq1  TAGCACTAATAAGAGAAATTAAACGCTTCCCATATCTGATATACAGTTCA  847
      ||||||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  TAGCACTAATAAGAG-AATTAAACGCTTCCCTTATCTGATATACAGTTCA  847

seq1  CTAAGCATGGTACTGACCTCATGAAAGGATGTGAAAGTTATTTCTTGAAA  897
      ||||||||||||||||| |||||||||||||||||||||||||| || ||
seq2  CTAAGCATGGTACTGACTTCATGAAAGGATGTGAAAGTTATTTCCTGGAA  897

seq1  GAATAAAAAGAATCTCAGATATTATAACAGTTGGTGTTCTGCCCTACTCC  947
      | ||||||||||||| ||| |||| ||||||||||||||||||||||| |
seq2  GGATAAAAAGAATCT-AGA-ATTA-AACAGTTGGTGTTCTGCCCTACTTC  944

seq1  AGAAGCTCAACTACCTGGAAAATTTTATTAGTTAGTATTTAATTTCTCTC  997
      || ||||| |||| || ||||| |||||||||||||| ||||||||||||
seq2  AG-AGCTC-ACTA-CTTGAAAAATTTATTAGTTAGTA-TTAATTTCTCTC  990