BAC Information

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BAC

Clone NameB6Ng01-065P22
Chromosome11 (Build37)
Map Location 26,632,696 - 26,633,351
singlet/doubletsinglet
Overlap genenone
Upstream gene5730522E02Rik, LOC100042328, LOC100042345, Fancl, Vrk2, EG628586, Ppia-ps11_266.1
Downstream geneOTTMUSG00000005300, LOC666270, LOC100042367, LOC100042377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065P22.bB6Ng01-065P22.g
ACCDH885307DH885308
length1,216752
definitionDH885307|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P22, 5' end.DH885308|Mus musculus domesticus DNA, BAC clone: B6Ng01-065P22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagacccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaatctcactaaa
atcagggactagacaaggctgcccactttctccctacctattcaataata
tacttgaagtcctagccagagcaatcaaaggaaaaatccagcaagatgaa
ctctcaatgctgaatatctatgctccaaatgcaagggtacccacagttgt
aaaagaaacattactaaagctcaaagtgcacattgcatctcacacaatag
tattggagacctcaacacctcactctcaccaatggacaaatcatggaaac
agaaactaaacagagacacagtgaaactaatagaagttttgaaccaaatg
gatttaatagatatttacagaacatttcactttaaagcaaaagaatagac
ctttttcgcaccaactcatggtaccttctccaattcacaatataattgga
cacaaaacaaggctcaacagatacaagaacatttacattactcccatgta
ttctatcagtccatcacagactaaggtttatattcaatagtgacaaaaac
aacagaaagtccacatacacatggaagctgaacaactctgctcaaagatt
acttggtcagggaagaaattaaaggctttaacaaaatttaacaaaaatga
aggtacataatacccaaacttatgggacacaatgaaagcagtactaagag
gaaaactcatagctctgagtgcctccttaaagaaattgaagaagtcatat
actagcagcataatagcacatttgaaaactctagaacaaaaaagaagcaa
atactaacaagaggagtagacacaggaataatcatctctgggttgaagtc
acccagtagacaaagagacatacaaagatcataaactagagttgcttcta
tgagaaatcacaagatttcactcttagcaaactactagaggcaagagaag
tacaaattacaaatcgaatgaaaggagatataacacagtactgagaaatt
ccgaaatcatcgattctactacaagactactcacaaactgaaactaatga
atgatattcgacagatctaggtccagtgattcgatacagataacactaac
ttccaactagaataagtgcttaagctcctatacaagaacgctcgcagctc
gacagtaccacgccta
gaattcctttgaggaatcatcatgttccacacgctgacacaagggctgtg
gtgatagatgtcacagtgagcggaagaatgggcaggaaggggtagaaaca
aaagtcttggacaggaaaaactggaatcaagctgttgtctttaaatagct
ttatccgttggtccgagacccgccgaacttaggaaattagtctgaacagg
tgagagggtgcgccagagaacctgacagcttctggaacaggcagaagcac
agaggcactgagggagcaccctttgtgggccggggacagccagccaccgt
ttggaccggaggacaggtgcccgcccggctggggaggcggcctaagccac
agcagcagcggtcgccatcttggtccgggacctgccgaacttaggaaatt
agtctgaacaggtgagagggtgcgccagagaacctgacagcctctggaac
aggcagaagcacagaggggctgaggcagcaccctgtgtgggccagggaca
gccggccaccttccggaccggaggacaggtgcccgcccggctggggaggc
ggcctaagccacagcagcagcggtcgccatcttggtcccgggactccaag
gaacttaggaatttagtctgcttagtgagagtctataccacctgggaact
gccaaagcaacacactgtctgagaaaggtcctgtttgggccttcttcttc
ggccagaggaggtccaaatacaagatatctgcgcacttccctgtagagag
ct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_26632696_26633351
seq2: B6Ng01-065P22.g_69_723

seq1  GAATTCCTTTGAGGAATCATCATGTTCCACACGCTGACACAAGGGCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGAGGAATCATCATGTTCCACACGCTGACACAAGGGCTGTG  50

seq1  GTGATAGATGTCACAGTGAGCGGAAGAATGGGCAGGAAGGGGTAGAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAGATGTCACAGTGAGCGGAAGAATGGGCAGGAAGGGGTAGAAACA  100

seq1  AAAGTCTTGGACAGGAAAAACTGGAATCAAGCTGTTGTCTTTAAATAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTGGACAGGAAAAACTGGAATCAAGCTGTTGTCTTTAAATAGCT  150

seq1  TTATCCGTTGGTCCGAGACCCGCCGAACTTAGGAAATTAGTCTGAACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCGTTGGTCCGAGACCCGCCGAACTTAGGAAATTAGTCTGAACAGG  200

seq1  TGAGAGGGTGCGCCAGAGAACCTGACAGCTTCTGGAACAGGCAGAAGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGGTGCGCCAGAGAACCTGACAGCTTCTGGAACAGGCAGAAGCAC  250

seq1  AGAGGCACTGAGGGAGCACCCTTTGTGGGCCGGGGACAGCCAGCCACCGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCACTGAGGGAGCACCCTTTGTGGGCCGGGGACAGCCAGCCACCGT  300

seq1  TTGGACCGGAGGACAGGTGCCCGCCCGGCTGGGGAGGCGGCCTAAGCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACCGGAGGACAGGTGCCCGCCCGGCTGGGGAGGCGGCCTAAGCCAC  350

seq1  AGCAGCAGCGGTCGCCATCTTGGTCCGGGACCTGCCGAACTTAGGAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCAGCGGTCGCCATCTTGGTCCGGGACCTGCCGAACTTAGGAAATT  400

seq1  AGTCTGAACAGGTGAGAGGGTGCGCCAGAGAACCTGACAGCCTCTGGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAACAGGTGAGAGGGTGCGCCAGAGAACCTGACAGCCTCTGGAAC  450

seq1  AGGCAGAAGCACAGAGGGGCTGAGGCAGCACCCTGTGTGGGCCAGGGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAAGCACAGAGGGGCTGAGGCAGCACCCTGTGTGGGCCAGGGACA  500

seq1  GCCGGCCACCTTCCGGACCGGAGGACAGGTGCCCGCCCGGCTGGGGAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGCCACCTTCCGGACCGGAGGACAGGTGCCCGCCCGGCTGGGGAGGC  550

seq1  GGCCTAAGCCACAGCAGCAGCGGTCGCCATCTTGGTCCCGGGACTCCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAAGCCACAGCAGCAGCGGTCGCCATCTTGGTCCCGGGACTCCAAG  600

seq1  GAACTTAGGAATTTAGTCTGCTTAGGTGAGAGTCTATACCACCTGGGAAC  650
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAACTTAGGAATTTAGTCTGCTTA-GTGAGAGTCTATACCACCTGGGAAC  649

seq1  TGCCAA  656
      ||||||
seq2  TGCCAA  655