BAC Information

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BAC

Clone NameB6Ng01-066G17
Chromosome11 (Build37)
Map Location 25,595,668 - 25,749,128
singlet/doubletdoublet
Overlap gene5730522E02Rik
Upstream geneLOC100042282
Downstream geneLOC100042328, LOC100042345, Fancl, Vrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066G17.bB6Ng01-066G17.g
ACCDH885605DH885606
length496810
definitionDH885605|Mus musculus domesticus DNA, BAC clone: B6Ng01-066G17, 5' end.DH885606|Mus musculus domesticus DNA, BAC clone: B6Ng01-066G17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,595,668 - 25,596,163)(25,748,320 - 25,749,128)
sequence
gaattcagtctattgagttggtggcacagattgttggtagtctggctgct
aggtggactgcgagagaagagagaattcaaatatttctaaaacatgatca
tttcccagacaagtttatggtcataacaccacataaagcttgagaaaatg
tcaacaggggaggcagagtggacaggtcacctatgtctttgattgctaaa
aggaaggagagacctgcagttcaaatgagccttcattaagactcagcaga
tgctatacatgtattgagagcagataatgtgtgatccaagccttactaga
tggttgaatttatgtcaaagtggctccattacatccatgtcccccgggtc
agactgcattagctgctttcctcattccatacgatacactaaagaatcaa
tggtgtacatcaaaaatgactctctgaaatatgtttctagagtccacagg
acactagttcagtgtgtgtatgcatgtgtggtcagtgtgtgtgtgt
gaattcaggagatgaaaatgtgttaaaaggaatgaaaagtgagctgagag
aactcagggggaaagcgaaagaaaaataacaaggaactgaaacccaggca
agcgctgggttcactagcaggggaggactgtgagagcactgcctgctgca
ccgaggggagtgaagaagacagcaaaggaaatgaactaggcagaaaggta
atgagggcccggctcccatatgcttatttgaattccgtatggaagaaaac
ctggtactaatgcagtgattaattaaggatacaagttgatgaaattcgct
tcaaagaaaacaaatctatgcgttgaaggggcatacatcccggaaacctt
ggcccattttaggcaataaataccaaacacaatctcacaaaaggtgaggc
agaaaggcaaaaaaagaaaaaagaaagaaaagaaaaaaacattgacacac
ttataatagattaaaaatcaggctgattccaaacttctccacagcaaagt
ttagctcccacagataatacagtaagtctatagaagacttacgaaaatac
gaatgaaggattaagacaataaaacagctgtttcaaacactccaaacagc
agtgaccctccatggacatgctggaactctgagtggagctagagggaggg
gcacaaaacaaggctgctctcctggcagaggtgctcaaggtcaccacaca
cacaaactacactctcaaaagtgggtgtgtggacacgcaaactttatatg
ccccagtacagggggacgccagggccaaaaaatgggaatgggtgggtagg
gaaagtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_25595668_25596163
seq2: B6Ng01-066G17.b_40_535

seq1  GAATTCAGTCTATTGAGTTGGTGGCACAGATTGTTGGTAGTCTGGCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTATTGAGTTGGTGGCACAGATTGTTGGTAGTCTGGCTGCT  50

seq1  AGGTGGACTGCGAGAGAAGAGAGAATTCAAATATTTCTAAAACATGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGACTGCGAGAGAAGAGAGAATTCAAATATTTCTAAAACATGATCA  100

seq1  TTTCCCAGACAAGTTTATGGTCATAACACCACATAAAGCTTGAGAAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAGACAAGTTTATGGTCATAACACCACATAAAGCTTGAGAAAATG  150

seq1  TCAACAGGGGAGGCAGAGTGGACAGGTCACCTATGTCTTTGATTGCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAGGGGAGGCAGAGTGGACAGGTCACCTATGTCTTTGATTGCTAAA  200

seq1  AGGAAGGAGAGACCTGCAGTTCAAATGAGCCTTCATTAAGACTCAGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAGAGACCTGCAGTTCAAATGAGCCTTCATTAAGACTCAGCAGA  250

seq1  TGCTATACATGTATTGAGAGCAGATAATGTGTGATCCAAGCCTTACTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATACATGTATTGAGAGCAGATAATGTGTGATCCAAGCCTTACTAGA  300

seq1  TGGTTGAATTTATGTCAAAGTGGCTCCATTACATCCATGTCCCCCGGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGAATTTATGTCAAAGTGGCTCCATTACATCCATGTCCCCCGGGTC  350

seq1  AGACTGCATTAGCTGCTTTCCTCATTCCATACGATACACTAAAGAATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGCATTAGCTGCTTTCCTCATTCCATACGATACACTAAAGAATCAA  400

seq1  TGGTGTACATCAAAAATGACTCTCTGAAATATGTTTCTAGAGTCCACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTACATCAAAAATGACTCTCTGAAATATGTTTCTAGAGTCCACAGG  450

seq1  ACACTAGTTCAGTGTGTGTATGCATGTGTGGTCAGTGTGTGTGTGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGTTCAGTGTGTGTATGCATGTGTGGTCAGTGTGTGTGTGT  496

seq1: chr11_25748320_25749128
seq2: B6Ng01-066G17.g_67_876 (reverse)

seq1  CCCCAC-TTCCCTACCCACCCATTCCCATTTTTTGGCCCTGGCGTCCCCC  49
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACTTTCCCTACCCACCCATTCCCATTTTTTGGCCCTGGCGTCCCCC  50

seq1  TGTACTGGGGCATATAAAGTTTGCGTGTCCACACACCCACTTTTGAGAGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGGGGCATATAAAGTTTGCGTGTCCACACACCCACTTTTGAGAGT  100

seq1  GTAGTTTGTGTGTGTGGTGACCTTGAGCACCTCTGCCAGGAGAGCAGCCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTGTGTGTGTGGTGACCTTGAGCACCTCTGCCAGGAGAGCAGCCT  150

seq1  TGTTTTGTGCCCCTCCCTCTAGCTCCACTCAGAGTTCCAGCATGTCCATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTGCCCCTCCCTCTAGCTCCACTCAGAGTTCCAGCATGTCCATG  200

seq1  GAGGGTCACTGCTGTTTGGAGTGTTTGAAACAGCTGTTTTATTGTCTTAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTCACTGCTGTTTGGAGTGTTTGAAACAGCTGTTTTATTGTCTTAA  250

seq1  TCCTTCATTCGTATTTTCGTAAGTCTTCTATAGACTTACTGTATTATCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCATTCGTATTTTCGTAAGTCTTCTATAGACTTACTGTATTATCTG  300

seq1  TGGGAGCTAAACTTTGCTGTGGAGAAGTTTGGAATCAGCCTGATTTTTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCTAAACTTTGCTGTGGAGAAGTTTGGAATCAGCCTGATTTTTAA  350

seq1  TCTATTATAAGTGTGTCAATGTTTTTTTCTTTTCTTTCTTTTTTCTTTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTATAAGTGTGTCAATGTTTTTTTCTTTTCTTTCTTTTTTCTTTTT  400

seq1  TTGCCTTTCTGCCTCACCTTTTGTGAGATTGTGTTTGGTATTTATTGCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTTCTGCCTCACCTTTTGTGAGATTGTGTTTGGTATTTATTGCCT  450

seq1  AAAATGGGCCAAGGTTTCCGGGATGTATGCCCCTTCAACGCATAGATTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGGCCAAGGTTTCCGGGATGTATGCCCCTTCAACGCATAGATTTG  500

seq1  TTTTCTTTGAAGCGAATTTCATCAACTTGTATCCTTAATTAATCACTGCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTGAAGCGAATTTCATCAACTTGTATCCTTAATTAATCACTGCA  550

seq1  TTAGTACCAGGTTTTCTTCCATACGGAATTCAAATAAGCATATGGGAGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTACCAGGTTTTCTTCCATACGGAATTCAAATAAGCATATGGGAGCC  600

seq1  GGGCCCTCATTACCTTTCTGCCTAGTTCATTTCCTTTGCTGTCTTCTTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTCATTACCTTTCTGCCTAGTTCATTTCCTTTGCTGTCTTCTTCA  650

seq1  CTCCCCTCGGTGCAGCAGGCAGTGCTCTCACAGTCCTCCCCTGCTAGTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTCGGTGCAGCAGGCAGTGCTCTCACAGTCCTCCCCTGCTAGTGA  700

seq1  ACCCAGCGCTTGCCTGGGTTTCAGTTCCTTGTTATTTTTCTTTCGCTTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCGCTTGCCTGGGTTTCAGTTCCTTGTTATTTTTCTTTCGCTTTC  750

seq1  CCCCTGAGTTCTCTCAGCTCACTTTTCATTCCTTTTAACACATTTTCATC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGAGTTCTCTCAGCTCACTTTTCATTCCTTTTAACACATTTTCATC  800

seq1  TCCTGAATTC  809
      ||||||||||
seq2  TCCTGAATTC  810