BAC Information

Click to search

BAC

Clone NameB6Ng01-067A10
Chromosome11 (Build37)
Map Location 64,229,248 - 64,230,361
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041690, LOC654442, LOC668297, Hs3st3b1, Cox10, 2810001G20Rik, EG544785
Downstream geneHs3st3a1, LOC626959, Elac2, AU040829, 1700086D15Rik, LOC100041790, Myocd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067A10.bB6Ng01-067A10.g
ACCDH886041DH886042
length1,1031,164
definitionDH886041|Mus musculus domesticus DNA, BAC clone: B6Ng01-067A10, 5' end.DH886042|Mus musculus domesticus DNA, BAC clone: B6Ng01-067A10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaatggttatacatgttggtattagtttcctgtgaatatgttt
tggatccacctactaaaagttaagagatcttgagaaattaactctttaag
gactgggtctcaagtggtaagaaaccattgcaacttgtgtaaactaaaag
gagctaatgaaacttgaagattttgcctctgtgttcacctttggatgctc
tgatggcagctgtaggatttgtctcattttgcccataaccctcagtaagt
acccttgtagttttcttcactctcaggcaacatccatcagtcacctgaat
gtgggtcacttgcttggttttatactaagcgctgtggctaaagcatggct
gtttcctgctcatctgtttacttgttactctgattagtttggacccacag
cttccaagaactaatcgcaggggcacctctcaagagaccattcatacctt
agactgttttgaaggttcataggcacagtacacacagctcagtcctggca
caagcaagttttccattagtgttaactcacacagacacaaagagcatgac
cctaaatgtttggagatgggtaaagctctacttagataaatctctaaaca
cttctgttggtgagtgtaggcttagatgtttttaagcctacttttaataa
gggtatttaagtgttttaacgtctgttctataccaccacccaccagaggt
agtggaaaggaaaggttaatagagcaaggaggatgtggacatgatctgtg
tgatcaggaaatcagcagtttagtttatatgaatcagcagtggcagcttg
atccactggcaaacaccatttaaggatcagcaacagcatgtcgatccaga
tgaaactacaagttctgccaattggctgagtctgtggaagtggcaagaac
tcaccagaacaccaccagaagatttttggttcatttctctctatgagtca
taacaaacaatgcccaacaaagaatggtaggcacaccatacccctcagca
tcatcagtgaagacagcatcagcaaagcacaacatgaccagtaagaacag
caagcatactatcatctagcacctccactgttcattgggctaatatttat
act
gaattcactttgtagtacaagttttatgagacacagaggcaagactagga
atataggacttggctctattaaaaaaaataacttaaaatttttattctta
caaaaaaaaagagctgcatgtgctgtttagatttttgtcagaatcacctg
ggaagggggaatctcagcggaggaagtgtccccaccagagtggcttgtgg
tcatccctgaggtgcatctaggttgaaagcgacctacaaagtgatttgtt
ctcagcaccagagacttgtggaattggtgcctggtcaaagggaccagagg
agccggtcagcaccttcccaccttgtgaggacatagtgaggaaatgggct
cctgtgagccagctgtgaactcgcagaccagatccagcagccctttgatc
tggactccaggctttcagaagcataaacaagaagtctgttgcttctaagc
catccattttatgatacattgctgttgcaaccaaacagactaagacactc
atcacactttagtagtgatgtctttgtgtaacttagttagggttactact
gctgccatgaaacaccatgaccaaaacaacttggagaagaaagggtctct
ttgttttatactcccacagcactgtcaaaggaattctgggcaggaacaaa
agccaggctggaacacgagacaggagttgatgcagaggctatggaggagt
gctgcttcctggcttgctctctgtgattgctcaaacttctctgtatagaa
ctgaggtacaccagcacagagacagcacccacagtgggctgggccctcct
tcatttatcactaattaagaaaatgccctactggcttgcctacagcctga
tcttatggaggtattttcataattgaggtaccctcctttcagatgacttt
agcttatgtcaagtgacacaaaactatgcaactcagtactgttttattaa
aatgacttttaaagccagtaaggaacatccctcatggcctctgcatcagc
tctgcttcctgactgctgagtcagttctgacttctggtgatgacagcagt
ttgggagtggtagctgataacccttcctcccacttgctcttggcagagag
gttgcagaatagaacctgactaaacggtatatatgtcggtggatattgca
cacgtaaggtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_64229248_64230361
seq2: B6Ng01-067A10.b_47_1149

seq1  GAATTCTTAATGGTTATACATGTTGGTATTAGTTTCCTGTGAATATGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATGGTTATACATGTTGGTATTAGTTTCCTGTGAATATGTTT  50

seq1  TGGATCCACCTACTAAAAGTTAAGAGATCTTGAGAAATTAACTCTTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCACCTACTAAAAGTTAAGAGATCTTGAGAAATTAACTCTTTAAG  100

seq1  GACTGGGTCTCAAGTGGTAAGAAACCATTGCAACTTGTGTAAACTAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGTCTCAAGTGGTAAGAAACCATTGCAACTTGTGTAAACTAAAAG  150

seq1  GAGCTAATGAAACTTGAAGATTTTGCCTCTGTGTTCACCTTTGGATGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAATGAAACTTGAAGATTTTGCCTCTGTGTTCACCTTTGGATGCTC  200

seq1  TGATGGCAGCTGTAGGATTTGTCTCATTTTGCCCATAACCCTCAGTAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCAGCTGTAGGATTTGTCTCATTTTGCCCATAACCCTCAGTAAGT  250

seq1  ACCCTTGTAGTTTTCTTCACTCTCAGGCAACATCCATCAGTCACCTGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTGTAGTTTTCTTCACTCTCAGGCAACATCCATCAGTCACCTGAAT  300

seq1  GTGGGTCACTTGCTTGGTTTTATACTAAGCGCTGTGGCTAAAGCATGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTCACTTGCTTGGTTTTATACTAAGCGCTGTGGCTAAAGCATGGCT  350

seq1  GTTTCCTGCTCATCTGTTTACTTGTTACTCTGATTAGTTTGGACCCACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTGCTCATCTGTTTACTTGTTACTCTGATTAGTTTGGACCCACAG  400

seq1  CTTCCAAGAACTAATCGCAGGGGCACCTCTCAAGAGACCATTCATACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAAGAACTAATCGCAGGGGCACCTCTCAAGAGACCATTCATACCTT  450

seq1  AGACTGTTTTGAAGGTTCATAGGCACAGTACACACAGCTCAGTCCTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTTTTGAAGGTTCATAGGCACAGTACACACAGCTCAGTCCTGGCA  500

seq1  CAAGCAAGTTTTCCATTAGTGTTAACTCACACAGACACAAAGAGCATGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAGTTTTCCATTAGTGTTAACTCACACAGACACAAAGAGCATGAC  550

seq1  CCTAAATGTTTGGAGATGGGTAAAGCTCTACTTAGATAAATCTCTAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATGTTTGGAGATGGGTAAAGCTCTACTTAGATAAATCTCTAAACA  600

seq1  CTTCTGTTGGTGAGTGTAGGCTTAGATGTTTTTAAGCCTACTTTTAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTTGGTGAGTGTAGGCTTAGATGTTTTTAAGCCTACTTTTAATAA  650

seq1  GGGTATTTAAGTGTTTTAACGTCTGTTCTATACCACCACCCACCAGAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATTTAAGTGTTTTAACGTCTGTTCTATACCACCACCCACCAGAGGT  700

seq1  AGTGGAAAGGAAAGGTTAATAGAGCAAGGAGGATGTGGACATGATCTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAAGGAAAGGTTAATAGAGCAAGGAGGATGTGGACATGATCTGTG  750

seq1  TGATCAGGAAATCAGCAGTTTAGTTTATATGAATCAGCAGTGGCAGCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGGAAATCAGCAGTTTAGTTTATATGAATCAGCAGTGGCAGCTTG  800

seq1  ATCCACTGGCAAACACCATTTAAGGATCAGCAACAGCAGGTCGATCCAGA  850
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATCCACTGGCAAACACCATTTAAGGATCAGCAACAGCATGTCGATCCAGA  850

seq1  TGAAACTACAAGGTTCTGCCAATTGGCTGAGTCTGTGGAAGTGGCAAGAA  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTACAA-GTTCTGCCAATTGGCTGAGTCTGTGGAAGTGGCAAGAA  899

seq1  CTCACCAGAACACCACCAGAAGATTTTTGGTTCATTTCTCTCTATGAAGT  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTCACCAGAACACCACCAGAAGATTTTTGGTTCATTTCTCTCTATG-AGT  948

seq1  CATAACAAACAATGCCCAACAAAGAATGGTAAGGCACACCAATACCACTC  1000
      |||||||||||||||||||||||||||||| ||||||||| ||||| |||
seq2  CATAACAAACAATGCCCAACAAAGAATGGT-AGGCACACC-ATACCCCTC  996

seq1  AGCATCATCAGTGAAGACCAGCATCAGCAAAGCACAACAATGACCAGTAA  1050
      ||||||||||||||||| |||||||||||||||||||| ||||||||| |
seq2  AGCATCATCAGTGAAGA-CAGCATCAGCAAAGCACAAC-ATGACCAGT-A  1043

seq1  AGAACAGCAAAGCATACTAATACCATCTAGCATCATCCACTGTTCATTGG  1100
      |||||||| ||||||||   || ||||||||| | |||||||||||||||
seq2  AGAACAGC-AAGCATAC---TATCATCTAGCA-CCTCCACTGTTCATTGG  1088

seq1  GCT-ATATTTATACT  1114
      ||| |||||||||||
seq2  GCTAATATTTATACT  1103